Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192289425

Identifier: 192289425

GI number: 192289425

Start: 1061712

End: 1062287

Strand: Reverse

Name: 192289425

Synonym: Rpal_0998

Alternate gene names: NA

Gene position: 1062287-1061712 (Counterclockwise)

Preceding gene: 192289427

Following gene: 192289424

Centisome position: 18.49

GC content: 67.53

Gene sequence:

>576_bases
ATGCAAGCACGACTATCCGGCACCTCGATCGGACTGACCGGTCCGGCGGCCACCAAGCTGGTGCGGCTGTCGCGCGCGAT
GGAATGGATCAGCACGATCGGGATCGTGCTGATCGTGGGACTGATCGGCGCCGTCTTCCTGGTCCCGAGCTGGACCCGCA
ATCTGCTGCTGACCAAGCTCGGCGAGATCGGCACACGGCTGCCGCTCGACGCCGGCAATCAGGCGCTGGCGGCTGTCATC
ATCACCGTGCCGGTGGCCGTGATGCTGTGGGGGCTGGTCAATGTGCGGGCGCTGTTCGCAGAGTTCGCGCGCGGCCAGGT
CTTCACCACCACAGCAGCCACCTACCTGCAGCGCTTCGGCATCGCCGTGCTGGCGCAGGGCCTGCTTGGTCCCGTCACCG
CGACCGCCCTGGCGCTCGCACTGTCGCTGAGCAATCCCCCCGGTCAACGTCTGCTGGTGCTGACGTTCTCCAGCAACGAC
TATGTCTCGGTGATCGTCGGCGGCGTGCTGGTGGCGGTCGCGGCGGTGATGCGCGAAGCGGCGCGGCTGGCCGACGAGAA
CGCGAGCTTCGTGTAG

Upstream 100 bases:

>100_bases
TGAACGAGGCGGGGAAGCGCATGACGTCCATCCTATCTTGACGATGATAAATTATCGTTTTACGATAATTTCATCTCGAA
ATAGATGATGGAGCCTTGCA

Downstream 100 bases:

>100_bases
GCGATGGCGATCGTAGTCAACCTCGACGTGATGCTGGCGCGGCGCAAGATGCGCTCGAAGGAACTCGCCGAGCAGATCGG
CATCACCGAGCAGAACGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MQARLSGTSIGLTGPAATKLVRLSRAMEWISTIGIVLIVGLIGAVFLVPSWTRNLLLTKLGEIGTRLPLDAGNQALAAVI
ITVPVAVMLWGLVNVRALFAEFARGQVFTTTAATYLQRFGIAVLAQGLLGPVTATALALALSLSNPPGQRLLVLTFSSND
YVSVIVGGVLVAVAAVMREAARLADENASFV

Sequences:

>Translated_191_residues
MQARLSGTSIGLTGPAATKLVRLSRAMEWISTIGIVLIVGLIGAVFLVPSWTRNLLLTKLGEIGTRLPLDAGNQALAAVI
ITVPVAVMLWGLVNVRALFAEFARGQVFTTTAATYLQRFGIAVLAQGLLGPVTATALALALSLSNPPGQRLLVLTFSSND
YVSVIVGGVLVAVAAVMREAARLADENASFV
>Mature_191_residues
MQARLSGTSIGLTGPAATKLVRLSRAMEWISTIGIVLIVGLIGAVFLVPSWTRNLLLTKLGEIGTRLPLDAGNQALAAVI
ITVPVAVMLWGLVNVRALFAEFARGQVFTTTAATYLQRFGIAVLAQGLLGPVTATALALALSLSNPPGQRLLVLTFSSND
YVSVIVGGVLVAVAAVMREAARLADENASFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19911; Mature: 19911

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARLSGTSIGLTGPAATKLVRLSRAMEWISTIGIVLIVGLIGAVFLVPSWTRNLLLTKL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GEIGTRLPLDAGNQALAAVIITVPVAVMLWGLVNVRALFAEFARGQVFTTTAATYLQRFG
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHH
IAVLAQGLLGPVTATALALALSLSNPPGQRLLVLTFSSNDYVSVIVGGVLVAVAAVMREA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
ARLADENASFV
HHHHCCCCCCC
>Mature Secondary Structure
MQARLSGTSIGLTGPAATKLVRLSRAMEWISTIGIVLIVGLIGAVFLVPSWTRNLLLTKL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GEIGTRLPLDAGNQALAAVIITVPVAVMLWGLVNVRALFAEFARGQVFTTTAATYLQRFG
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHH
IAVLAQGLLGPVTATALALALSLSNPPGQRLLVLTFSSNDYVSVIVGGVLVAVAAVMREA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
ARLADENASFV
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA