| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yozG [H]
Identifier: 192289424
GI number: 192289424
Start: 1061499
End: 1061708
Strand: Reverse
Name: yozG [H]
Synonym: Rpal_0997
Alternate gene names: 192289424
Gene position: 1061708-1061499 (Counterclockwise)
Preceding gene: 192289425
Following gene: 192289419
Centisome position: 18.48
GC content: 58.57
Gene sequence:
>210_bases ATGGCGATCGTAGTCAACCTCGACGTGATGCTGGCGCGGCGCAAGATGCGCTCGAAGGAACTCGCCGAGCAGATCGGCAT CACCGAGCAGAACGTCTCGCTGCTGAAATCCGGCAAGGTGAAGGGCATCCGATTCGAAACACTGTCACGGATCTGCACGG TGCTCGAGTGTCAGCCCGGCGACATTCTCGAATACGTCGAGGACAAGTAG
Upstream 100 bases:
>100_bases CTATGTCTCGGTGATCGTCGGCGGCGTGCTGGTGGCGGTCGCGGCGGTGATGCGCGAAGCGGCGCGGCTGGCCGACGAGA ACGCGAGCTTCGTGTAGGCG
Downstream 100 bases:
>100_bases CAGCGAATAAGAAAAGGCCGGCAGCTGCAGGGCGCAGGTGCCGGCCTTCGAATTTTCAAGTTGGCGCCGCGATCGGCGCG AGCGGTTCGACGTCCGATCA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MAIVVNLDVMLARRKMRSKELAEQIGITEQNVSLLKSGKVKGIRFETLSRICTVLECQPGDILEYVEDK
Sequences:
>Translated_69_residues MAIVVNLDVMLARRKMRSKELAEQIGITEQNVSLLKSGKVKGIRFETLSRICTVLECQPGDILEYVEDK >Mature_68_residues AIVVNLDVMLARRKMRSKELAEQIGITEQNVSLLKSGKVKGIRFETLSRICTVLECQPGDILEYVEDK
Specific function: Unknown
COG id: COG3655
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 7808; Mature: 7677
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVVNLDVMLARRKMRSKELAEQIGITEQNVSLLKSGKVKGIRFETLSRICTVLECQPG CEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC DILEYVEDK HHHHHCCCC >Mature Secondary Structure AIVVNLDVMLARRKMRSKELAEQIGITEQNVSLLKSGKVKGIRFETLSRICTVLECQPG EEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC DILEYVEDK HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]