| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289419
Identifier: 192289419
GI number: 192289419
Start: 1057597
End: 1058616
Strand: Reverse
Name: 192289419
Synonym: Rpal_0992
Alternate gene names: NA
Gene position: 1058616-1057597 (Counterclockwise)
Preceding gene: 192289424
Following gene: 192289418
Centisome position: 18.43
GC content: 66.96
Gene sequence:
>1020_bases ATGGCTTCAGGCCCTTCCCCGCGCCAGGCGATGGAGATCGAACTCGACAAGCTGTCGTCGCCGCGAATCTTCCTGGTGCG GATGCTGGTGTTCCTGGTGCTGTGCGCGCTGATCGTGGTGGTGCTGTACAAGCAGATCCTGGCCGCCTTCATGGCCAATC CGGGCCTCAACGGCCTGATCTGCGCGGTGCTGGTGATCGGCATCGTGCTGGCCTTCCGCCAGGTGATCCGGCTGTATCCC GAGGTCGCCTGGGTCAACAATTTCCGCATCAACGATCCAGGCCTCGCGCTCGACCGGCGGCCGAGCCTGCTGGCGCCGAT GGCCGCGATGCTCGGCGGCGAGCGCTCGGGCCGAATCGCGATCTCGCCGCAGACGATGCGGCATCTGCTCGACTCGATCG CCACGAGGCTCGACGAAGCACGCGACATCTCGCGCTACATGACCGGCCTGTTGGTCTTCCTCGGCCTGCTCGGCACCTTC TGGGGCCTGATCGAGACCGTCGGCTCGATCGGCGGAGTGATCGGCAGCCTGAAAGTCACCGGCGACGCCGGCTCGCTGTT CGACACGCTGAAGGAAGGCCTCGCCGCCCCGCTCGGCGGCATGGGGATTTCGTTCTCGTCGTCGCTGTTCGGCCTCGCCG GCTCGCTGGTCCTCGGCTTCCTCGATCTGCAATCCAGCCAGGCGCAGAACCGGTTCTACACCGACCTCGAAGACTGGCTG GCTTCGACGGTACGCGGCTCGGTGGACGATGGCGCGCTCGCCGGCAGCGCGGATCTGCAGGCCGCGCTGGAGCGGCTGCG GCTGACGCTGGAAGATGGCGGCGCCAACCGCGCCACCACCGCCGCGATGGCCAACCTCGCCAATGCGATCCAGAGCCTGG TCGGGCACATGCGCAACGAGCAGCAGATGATCCGCGAATGGGCGGACGCCCAGGGTGAGCAGAACCGCGAGATCAAGGAG CTATTGTCCGCCCTGGTGAACCGGCCCGAGAAGAGCCTGCGCGAGCCGGAGAAGAGCTGA
Upstream 100 bases:
>100_bases GCGCGGAGGCAGATAACCGCCTCAACCGCTTCCTTCCACGCCGTGCTGTGCCATATTGGGTGAAACAGCCGCTTCCGGCA AACCGGAGACAGAACAGACG
Downstream 100 bases:
>100_bases TGGCGCTGGCCCGCGGCCGCAGGCAGGAGTCCGGCTTCAACTACTGGCCGGGCTTCGTCGATGCGCTGTCGACGCTGATC CTCGGCATCGTGTTCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family; Transmembrane Protein
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MASGPSPRQAMEIELDKLSSPRIFLVRMLVFLVLCALIVVVLYKQILAAFMANPGLNGLICAVLVIGIVLAFRQVIRLYP EVAWVNNFRINDPGLALDRRPSLLAPMAAMLGGERSGRIAISPQTMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTF WGLIETVGSIGGVIGSLKVTGDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL ASTVRGSVDDGALAGSADLQAALERLRLTLEDGGANRATTAAMANLANAIQSLVGHMRNEQQMIREWADAQGEQNREIKE LLSALVNRPEKSLREPEKS
Sequences:
>Translated_339_residues MASGPSPRQAMEIELDKLSSPRIFLVRMLVFLVLCALIVVVLYKQILAAFMANPGLNGLICAVLVIGIVLAFRQVIRLYP EVAWVNNFRINDPGLALDRRPSLLAPMAAMLGGERSGRIAISPQTMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTF WGLIETVGSIGGVIGSLKVTGDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL ASTVRGSVDDGALAGSADLQAALERLRLTLEDGGANRATTAAMANLANAIQSLVGHMRNEQQMIREWADAQGEQNREIKE LLSALVNRPEKSLREPEKS >Mature_338_residues ASGPSPRQAMEIELDKLSSPRIFLVRMLVFLVLCALIVVVLYKQILAAFMANPGLNGLICAVLVIGIVLAFRQVIRLYPE VAWVNNFRINDPGLALDRRPSLLAPMAAMLGGERSGRIAISPQTMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFW GLIETVGSIGGVIGSLKVTGDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWLA STVRGSVDDGALAGSADLQAALERLRLTLEDGGANRATTAAMANLANAIQSLVGHMRNEQQMIREWADAQGEQNREIKEL LSALVNRPEKSLREPEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36524; Mature: 36393
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGPSPRQAMEIELDKLSSPRIFLVRMLVFLVLCALIVVVLYKQILAAFMANPGLNGLI CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH CAVLVIGIVLAFRQVIRLYPEVAWVNNFRINDPGLALDRRPSLLAPMAAMLGGERSGRIA HHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEE ISPQTMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSIGGVIGSLKVT ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEC GDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASTVRGSVDDGALAGSADLQAALERLRLTLEDGGANRATTAAMANLANAIQSLVGHMRNE HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCH QQMIREWADAQGEQNREIKELLSALVNRPEKSLREPEKS HHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCC >Mature Secondary Structure ASGPSPRQAMEIELDKLSSPRIFLVRMLVFLVLCALIVVVLYKQILAAFMANPGLNGLI CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH CAVLVIGIVLAFRQVIRLYPEVAWVNNFRINDPGLALDRRPSLLAPMAAMLGGERSGRIA HHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEE ISPQTMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSIGGVIGSLKVT ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEC GDAGSLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWL CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASTVRGSVDDGALAGSADLQAALERLRLTLEDGGANRATTAAMANLANAIQSLVGHMRNE HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCH QQMIREWADAQGEQNREIKELLSALVNRPEKSLREPEKS HHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA