| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289343
Identifier: 192289343
GI number: 192289343
Start: 971099
End: 971485
Strand: Reverse
Name: 192289343
Synonym: Rpal_0915
Alternate gene names: NA
Gene position: 971485-971099 (Counterclockwise)
Preceding gene: 192289347
Following gene: 192289342
Centisome position: 16.91
GC content: 60.72
Gene sequence:
>387_bases ATGGCGGACGACACGCACAACAGCAGCCGAAGAGCGCATGAACCACGCGACGGATCGCCTGAGGAGGCTGCGCTTTCCGC ACGGCTCGGAAGCCTGGAACAACGGTTGGCCCATTCTCGGGTGAACCGGACACTCCAGACGGATCAATCCGAAACAGGAA GTGAAAACGGACATGCCAAAGCTTCGGCGATGGCGCTCGGTTTTCGGCTTTCTTCGGAGTTGATTGCGGGCGTTCTCGGC GGAGCGGCTCTCGGCTGGGGTATCGATCGTTTGTTTTCGACCTCGCCCTGGGGTCTCATCGCGTTTGCGCTGATCGGCTT CATCGCCGGTGTGGTCAATGTGATGCGGGCAGCGGGCGTCATGGCGAAACAGTCCGAGCGACTCTGA
Upstream 100 bases:
>100_bases CTTGACTTGCCAACAGGTGGTCAGTATGGTCCGCGCGGCTTTTAAGGGTTTCTGGGGCGTTATTTCATCGTTAGCGGTAG CTAGTTCGGGTCTCCACGAC
Downstream 100 bases:
>100_bases GCGGGATCCAAGGCGCACCGATCGTTCGAATCCCGCGCAAGCTCGCGACACCGACAGACTGAGAGACGAATGGCCGCCGA TCCGATCCATCAGTTCCAGA
Product: FoF1 ATP synthase subunit I
Products: NA
Alternate protein names: ATP Synthase Subunit A Membrane Bound F0 Sector
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MADDTHNSSRRAHEPRDGSPEEAALSARLGSLEQRLAHSRVNRTLQTDQSETGSENGHAKASAMALGFRLSSELIAGVLG GAALGWGIDRLFSTSPWGLIAFALIGFIAGVVNVMRAAGVMAKQSERL
Sequences:
>Translated_128_residues MADDTHNSSRRAHEPRDGSPEEAALSARLGSLEQRLAHSRVNRTLQTDQSETGSENGHAKASAMALGFRLSSELIAGVLG GAALGWGIDRLFSTSPWGLIAFALIGFIAGVVNVMRAAGVMAKQSERL >Mature_127_residues ADDTHNSSRRAHEPRDGSPEEAALSARLGSLEQRLAHSRVNRTLQTDQSETGSENGHAKASAMALGFRLSSELIAGVLGG AALGWGIDRLFSTSPWGLIAFALIGFIAGVVNVMRAAGVMAKQSERL
Specific function: Unknown
COG id: COG5336
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13514; Mature: 13383
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDTHNSSRRAHEPRDGSPEEAALSARLGSLEQRLAHSRVNRTLQTDQSETGSENGHAK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH ASAMALGFRLSSELIAGVLGGAALGWGIDRLFSTSPWGLIAFALIGFIAGVVNVMRAAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MAKQSERL HHHHCCCC >Mature Secondary Structure ADDTHNSSRRAHEPRDGSPEEAALSARLGSLEQRLAHSRVNRTLQTDQSETGSENGHAK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH ASAMALGFRLSSELIAGVLGGAALGWGIDRLFSTSPWGLIAFALIGFIAGVVNVMRAAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MAKQSERL HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA