| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is 192289268
Identifier: 192289268
GI number: 192289268
Start: 889183
End: 889629
Strand: Reverse
Name: 192289268
Synonym: Rpal_0840
Alternate gene names: NA
Gene position: 889629-889183 (Counterclockwise)
Preceding gene: 192289269
Following gene: 192289267
Centisome position: 15.49
GC content: 48.77
Gene sequence:
>447_bases GTGAAGTTCAGTTCATATTACAACAATCTCGGGATCAATGCGTTTGCAATTTCGTCGGTGCTGGAAGCGGCGGGATTTTT ATCGATTCCCCAGATTGCGTTGATTTTGCCAGTTGTTGCGCACCGTCAGATGGTCAAAAAGCTTGCAGATGGAAGATTCC ATTTTGTCAGCTTTGAACAGTACCTGATTGATAACATAGAATTCTTCTTCAATTTCAATGAACGATACTTTGCGTCGCTT ACTCCCACTGTGAACGCTCTGCAGTTTTTGCGCGAGATGAACGCTATTGAACTAGACGGCGGCGGCGCGGTGAATGCGTC CGGCTTACCGTTCGACGCCTCGATGGGTAAACGCGCCGAGCGCGTTAAGCGCGCATCGCCGAATATCGCCGCCCTAATCT CCGGGAACACTGAAGTTTTTTACCTAAATGCGCGGATAGAGCTATGA
Upstream 100 bases:
>100_bases CTTCGCAGGAGCTCCCATTAACTATGAGCAACGGCGGATTCTATGATCTCTCGAATCGACCGGTGATTGGCTGGTTGAGC GACTGGAAAGATCGCTACAA
Downstream 100 bases:
>100_bases AGTTTTACATCGAAAGCCTGCACCTATGGCTCAAGACCGAAAAGAGACGGTCCGTTACATTCCTACCAAACAAGGTGAAT GTGATCACCGGAGAAAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKFSSYYNNLGINAFAISSVLEAAGFLSIPQIALILPVVAHRQMVKKLADGRFHFVSFEQYLIDNIEFFFNFNERYFASL TPTVNALQFLREMNAIELDGGGAVNASGLPFDASMGKRAERVKRASPNIAALISGNTEVFYLNARIEL
Sequences:
>Translated_148_residues MKFSSYYNNLGINAFAISSVLEAAGFLSIPQIALILPVVAHRQMVKKLADGRFHFVSFEQYLIDNIEFFFNFNERYFASL TPTVNALQFLREMNAIELDGGGAVNASGLPFDASMGKRAERVKRASPNIAALISGNTEVFYLNARIEL >Mature_148_residues MKFSSYYNNLGINAFAISSVLEAAGFLSIPQIALILPVVAHRQMVKKLADGRFHFVSFEQYLIDNIEFFFNFNERYFASL TPTVNALQFLREMNAIELDGGGAVNASGLPFDASMGKRAERVKRASPNIAALISGNTEVFYLNARIEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16462; Mature: 16462
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSSYYNNLGINAFAISSVLEAAGFLSIPQIALILPVVAHRQMVKKLADGRFHFVSFEQ CCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH YLIDNIEFFFNFNERYFASLTPTVNALQFLREMNAIELDGGGAVNASGLPFDASMGKRAE HHHHCCCEEEECCCCEEEECCCHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCCCHHHH RVKRASPNIAALISGNTEVFYLNARIEL HHHHCCCCEEEEEECCCEEEEEEEEEEC >Mature Secondary Structure MKFSSYYNNLGINAFAISSVLEAAGFLSIPQIALILPVVAHRQMVKKLADGRFHFVSFEQ CCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH YLIDNIEFFFNFNERYFASLTPTVNALQFLREMNAIELDGGGAVNASGLPFDASMGKRAE HHHHCCCEEEECCCCEEEECCCHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCCCHHHH RVKRASPNIAALISGNTEVFYLNARIEL HHHHCCCCEEEEEECCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA