| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289267
Identifier: 192289267
GI number: 192289267
Start: 887327
End: 889186
Strand: Reverse
Name: 192289267
Synonym: Rpal_0839
Alternate gene names: NA
Gene position: 889186-887327 (Counterclockwise)
Preceding gene: 192289268
Following gene: 192289264
Centisome position: 15.48
GC content: 48.55
Gene sequence:
>1860_bases ATGAAGTTTTACATCGAAAGCCTGCACCTATGGCTCAAGACCGAAAAGAGACGGTCCGTTACATTCCTACCAAACAAGGT GAATGTGATCACCGGAGAAAGCCACACAGGCAAAACCGCGATACTGGACATCATTGATTACTGCATGTTTGCTAGTAAGC ACCGCATTTCTGAGAGCATTATCAACGAAAATGCTACCTGGTACGGGCTACGCATTCATGTGAATGACAAGATTTATACG CTAGCACGACGGGCACCAAAACAAACGATCACATCGTCTGATTATTATTTTTCATCAGTTGGCGACGTGCCCGACTCCAC GCCAACTCCAAATATCAGCGAGAGCGCTCTGAAAAAGCAGTTTGGCGCGGATTTCGGTATCGACCAAGACGTAACGATTC CCTTCGGCGGAAGAACGCTAAGAACCGGCTCCAGAGTATCATTGCGATACTTTCTGCTCTTTAACACGATCTCACAGAAC ATAATCACGCATAGCGATCAGTTTTTCGATAAGCAGGACGATCAGCGCTACCAAGAAGCATTACCGCGCATATTCGACAT CGCTGCAGGAATCGACACCATCGAGAATATACTGAAACGAGAGAAGCGGGCTGAGTTGGAGCGAAACCTCGCGCGCCTTA AAAAATTGGCCGCAAAAGCGCAGGAAAAACGCGGACAATTTAACGCCCAGCTGGCCGAGACCGTTGCGCGAGCGAAGGGA TATGGGCTTTTGGCCGACAACACTGACGCAGATGCGTCAGTCGCTGCCTTGAAGCGCGTAGTGACAAATCAAGACAGGAG CCCAGATCTCTATGTATCCGCGCGGTATGATGAAATCTCTTCGCAGATCTACCAGATTTCTCGAAAAATCAGAGGGCTTC GGAGGTTTTCATCCGAGTACAGCAACCACAAAGCAACTCTCAAAGACACGGCCGACAGCCTCCAGCCCGTTGAATACCTG ATTAAGAATTATGATGAGGCGATCCGCACATCCGTATTCGACGAGATTCTAAAAAATCTTTCAGAAGGTCTCCAGCAGAT CAAGGACGCTACCGCGAAAAAAACGCCGCTGGATAGCAACATCTCCGAAATCGTCAAGGCATTGGAAGCGCAGCGCGCAA AGCTCGAAGAAGAGCTGCAGACTCTTCCGGCTGACATGGATAGCTTCGAAACAGACAGAGACAGGTATATCTTCATCGGC GAGACGAAAGCGAAGCTTGAACTATATGGCGATCCAGACTCGGAAAGCGCCCCAGACAACAGTGAGCTGATCTCAAAATT GGAGTCTGAAATAGAAGACCTCACCGTTCCTCCTATCAACGAACGGCAAGAGCTCTTCACCAGCGCGCTTGATGAGGCGA TCCAAGACTATATTTCTCTGACGAGGGACGCACTCGGAAACTATGGAGAATATCGTTCGGCCTTCAATTATTCCGAAAAG AAGCTTCATCTACGGAAGCCTCGGACGGCATCTACCGAGAACGTTGGCAGCAGTTCAAACCACATGTTCCTCCACCTGTT TCTATTCCTTGGGATTCATGAGTTGATTATGCGGAACAATGGGATCCACGTGGCGCCGTTTCTGATTATTGATCAGTTTT CTAGGCCGTATTGGGGGGAAGATGATCAAGGGGAGGGAAAGGGTGAGAAAGACGTCGACCAGAGCGACGTAGCCAAGGTC AAATTGGCACTGGAGCTATTGAATCAGTTCATAACTACGGCGAATACAATAGGGAAAGATTTCCAAATTATCGTTTTCGA GCACATAAACCCGCGATACTGGAACGGGCTCAAAAACGTGCACCTGGTTGAAATTTTCAGAAATGGAAATGCTCTTATCC CATCTTCCTGGCTGAACTAG
Upstream 100 bases:
>100_bases TGGGTAAACGCGCCGAGCGCGTTAAGCGCGCATCGCCGAATATCGCCGCCCTAATCTCCGGGAACACTGAAGTTTTTTAC CTAAATGCGCGGATAGAGCT
Downstream 100 bases:
>100_bases AAAGCATTGAACGCGAACCTTCCGTAAAATCAGATTTTTGATCTGAAGTGATCATAAGTAAGGAATCTGGTCGGTCGAAT GACTTTGCGAGGCTAGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MKFYIESLHLWLKTEKRRSVTFLPNKVNVITGESHTGKTAILDIIDYCMFASKHRISESIINENATWYGLRIHVNDKIYT LARRAPKQTITSSDYYFSSVGDVPDSTPTPNISESALKKQFGADFGIDQDVTIPFGGRTLRTGSRVSLRYFLLFNTISQN IITHSDQFFDKQDDQRYQEALPRIFDIAAGIDTIENILKREKRAELERNLARLKKLAAKAQEKRGQFNAQLAETVARAKG YGLLADNTDADASVAALKRVVTNQDRSPDLYVSARYDEISSQIYQISRKIRGLRRFSSEYSNHKATLKDTADSLQPVEYL IKNYDEAIRTSVFDEILKNLSEGLQQIKDATAKKTPLDSNISEIVKALEAQRAKLEEELQTLPADMDSFETDRDRYIFIG ETKAKLELYGDPDSESAPDNSELISKLESEIEDLTVPPINERQELFTSALDEAIQDYISLTRDALGNYGEYRSAFNYSEK KLHLRKPRTASTENVGSSSNHMFLHLFLFLGIHELIMRNNGIHVAPFLIIDQFSRPYWGEDDQGEGKGEKDVDQSDVAKV KLALELLNQFITTANTIGKDFQIIVFEHINPRYWNGLKNVHLVEIFRNGNALIPSSWLN
Sequences:
>Translated_619_residues MKFYIESLHLWLKTEKRRSVTFLPNKVNVITGESHTGKTAILDIIDYCMFASKHRISESIINENATWYGLRIHVNDKIYT LARRAPKQTITSSDYYFSSVGDVPDSTPTPNISESALKKQFGADFGIDQDVTIPFGGRTLRTGSRVSLRYFLLFNTISQN IITHSDQFFDKQDDQRYQEALPRIFDIAAGIDTIENILKREKRAELERNLARLKKLAAKAQEKRGQFNAQLAETVARAKG YGLLADNTDADASVAALKRVVTNQDRSPDLYVSARYDEISSQIYQISRKIRGLRRFSSEYSNHKATLKDTADSLQPVEYL IKNYDEAIRTSVFDEILKNLSEGLQQIKDATAKKTPLDSNISEIVKALEAQRAKLEEELQTLPADMDSFETDRDRYIFIG ETKAKLELYGDPDSESAPDNSELISKLESEIEDLTVPPINERQELFTSALDEAIQDYISLTRDALGNYGEYRSAFNYSEK KLHLRKPRTASTENVGSSSNHMFLHLFLFLGIHELIMRNNGIHVAPFLIIDQFSRPYWGEDDQGEGKGEKDVDQSDVAKV KLALELLNQFITTANTIGKDFQIIVFEHINPRYWNGLKNVHLVEIFRNGNALIPSSWLN >Mature_619_residues MKFYIESLHLWLKTEKRRSVTFLPNKVNVITGESHTGKTAILDIIDYCMFASKHRISESIINENATWYGLRIHVNDKIYT LARRAPKQTITSSDYYFSSVGDVPDSTPTPNISESALKKQFGADFGIDQDVTIPFGGRTLRTGSRVSLRYFLLFNTISQN IITHSDQFFDKQDDQRYQEALPRIFDIAAGIDTIENILKREKRAELERNLARLKKLAAKAQEKRGQFNAQLAETVARAKG YGLLADNTDADASVAALKRVVTNQDRSPDLYVSARYDEISSQIYQISRKIRGLRRFSSEYSNHKATLKDTADSLQPVEYL IKNYDEAIRTSVFDEILKNLSEGLQQIKDATAKKTPLDSNISEIVKALEAQRAKLEEELQTLPADMDSFETDRDRYIFIG ETKAKLELYGDPDSESAPDNSELISKLESEIEDLTVPPINERQELFTSALDEAIQDYISLTRDALGNYGEYRSAFNYSEK KLHLRKPRTASTENVGSSSNHMFLHLFLFLGIHELIMRNNGIHVAPFLIIDQFSRPYWGEDDQGEGKGEKDVDQSDVAKV KLALELLNQFITTANTIGKDFQIIVFEHINPRYWNGLKNVHLVEIFRNGNALIPSSWLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70454; Mature: 70454
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFYIESLHLWLKTEKRRSVTFLPNKVNVITGESHTGKTAILDIIDYCMFASKHRISESI CCEEHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH INENATWYGLRIHVNDKIYTLARRAPKQTITSSDYYFSSVGDVPDSTPTPNISESALKKQ HCCCCEEEEEEEEECCHHHHHHHHCCHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHH FGADFGIDQDVTIPFGGRTLRTGSRVSLRYFLLFNTISQNIITHSDQFFDKQDDQRYQEA HCCCCCCCCCEEECCCCEEECCCCCCEEEHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHH LPRIFDIAAGIDTIENILKREKRAELERNLARLKKLAAKAQEKRGQFNAQLAETVARAKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC YGLLADNTDADASVAALKRVVTNQDRSPDLYVSARYDEISSQIYQISRKIRGLRRFSSEY CEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH SNHKATLKDTADSLQPVEYLIKNYDEAIRTSVFDEILKNLSEGLQQIKDATAKKTPLDSN HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ISEIVKALEAQRAKLEEELQTLPADMDSFETDRDRYIFIGETKAKLELYGDPDSESAPDN HHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCH SELISKLESEIEDLTVPPINERQELFTSALDEAIQDYISLTRDALGNYGEYRSAFNYSEK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH KLHLRKPRTASTENVGSSSNHMFLHLFLFLGIHELIMRNNGIHVAPFLIIDQFSRPYWGE HEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCC DDQGEGKGEKDVDQSDVAKVKLALELLNQFITTANTIGKDFQIIVFEHINPRYWNGLKNV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCC HLVEIFRNGNALIPSSWLN EEEEEEECCCEECCHHCCC >Mature Secondary Structure MKFYIESLHLWLKTEKRRSVTFLPNKVNVITGESHTGKTAILDIIDYCMFASKHRISESI CCEEHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH INENATWYGLRIHVNDKIYTLARRAPKQTITSSDYYFSSVGDVPDSTPTPNISESALKKQ HCCCCEEEEEEEEECCHHHHHHHHCCHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHH FGADFGIDQDVTIPFGGRTLRTGSRVSLRYFLLFNTISQNIITHSDQFFDKQDDQRYQEA HCCCCCCCCCEEECCCCEEECCCCCCEEEHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHH LPRIFDIAAGIDTIENILKREKRAELERNLARLKKLAAKAQEKRGQFNAQLAETVARAKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC YGLLADNTDADASVAALKRVVTNQDRSPDLYVSARYDEISSQIYQISRKIRGLRRFSSEY CEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH SNHKATLKDTADSLQPVEYLIKNYDEAIRTSVFDEILKNLSEGLQQIKDATAKKTPLDSN HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ISEIVKALEAQRAKLEEELQTLPADMDSFETDRDRYIFIGETKAKLELYGDPDSESAPDN HHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCH SELISKLESEIEDLTVPPINERQELFTSALDEAIQDYISLTRDALGNYGEYRSAFNYSEK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH KLHLRKPRTASTENVGSSSNHMFLHLFLFLGIHELIMRNNGIHVAPFLIIDQFSRPYWGE HEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCC DDQGEGKGEKDVDQSDVAKVKLALELLNQFITTANTIGKDFQIIVFEHINPRYWNGLKNV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCC HLVEIFRNGNALIPSSWLN EEEEEEECCCEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA