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The map label for this gene is nrfB [C]

Identifier: 192289245

GI number: 192289245

Start: 859972

End: 861594

Strand: Reverse

Name: nrfB [C]

Synonym: Rpal_0817

Alternate gene names: 192289245

Gene position: 861594-859972 (Counterclockwise)

Preceding gene: 192289246

Following gene: 192289244

Centisome position: 15.0

GC content: 68.27

Gene sequence:

>1623_bases
ATGGGGGGCTCTCGGGGGGCGGCGGCTGCGCGCGACCAAAGTCGGCGCGGCCGCCGGAGCTGGATCTCGTCGCTGTTCGT
ATCGATTGCGCTGGCCTGGGGGACCTGGCCAGCCGGCGCCGAACCGGCGATGGTCGGACACACCGCCTTGCCGCATGACG
GCCAAGTCGGCGCGGTCGATCCGTCGGTCAATGCGCTGGTCGACTACGTGCGCGGCCTGCAGAGCGCCGGCAAGACCGAA
CAGAACTTCACGCCGGTGCCTGCCCACGGCCTCGCGCTTGGTGACGGACATGGCGGCGGGCATGGCGGCATCTCGGGCCA
CGGCGCCTCCGCGCATGGTTCGCCGCACGGTGCGGCAGCAGCCGGCCCGCGTTTCGACACGCGCTTTGCCGGGCATGGTT
CGACCGAGAACTTGCTGGCGCTTCCCCAGATCGACGGTGGCCCACAGCTCGAGCAGAGCCTGCGGTTTACGGCTTCGCTG
CGCCTCACCACCCTCAGCGAAAAGCGCATCCTGCGATCTCACCAGACCCGCCACACGCTGGCGGCGCGGCTCGCCCGCGA
GCCGGACTACGTGGCGGAGATGCCGGAGCCGGTGCGCGATGCCGCCACGGTAACCACCTGGGTGGCGCTGGAAAATTTCG
ACGACACCATCGAGCAGCCGAAGCAGTTCGACTTCATCGAGATCCTCGCCGCCAAGGCGGATGATTCCCGGCCGGTCCTG
ATGGTCGCGACGCGCGAGCCGAGGGCTGCGGCCGCCGGGCGCGCGCCGATGGTGGCACCCGCACCCGGCGATCCCGATGG
CCGTTACTTCGTCGGCTCCAAGCCGTGCGAGACCTGCCACGCAGGCCTGTTCGACGAGTTCCAGCAGACCGTGATGGGCC
GCAACATCAAGTCCGGCAAGGTCACGCCGCAGGGCAAGATGGAATGCGAGACCTGCCACGGCCCCGGCTCGGCGCACGTC
AATGGCGGCGGCGGCCGCGAGAAGGGCGGCATCCGCTCGTTCCGGCCGACCGACAGCCGCGGCTTCGACGTCGCCGAGGC
CAACAGCGTCTGCCTGAGCTGCCACGAGAAGGGCGACCAGACCTATTGGCAGGGGTCGCAGCACGAGACCCGCGGCCTCG
CCTGCGTCAACTGCCACACCGTGATGCGCAAGGTGTCGCCGCGCAATCAGCTCAAGACCGTGCAGGTGATGGATACCTGC
TTCCAGTGCCACAAGGATCGCAAAGCGCAGGTGCAGCGCAGCTCGCACATGCCGATCCGCGAAACCAAAATCACCTGCGT
CAATTGCCACAACCCGCACGGCAGCGCGACCGAGAAGCTGCTGCGCGAGGCGACCGTCAACGACACTTGCTACACCTGCC
ACGCCGACAAGCGCGGACCGTTCCTGTTCGAACATCCGCCGGTCCGCGAGAACTGCCTGAACTGCCACGAACCGCACGGC
TCCAACCACGAGTCGCTGCTGATCGTCGCGCGGCAGCGGCTGTGCCAGCAGTGCCATACCAACCCGCACAACCAGCCAGG
TCTGCCGACGTCGGCGCGCTGGGCGGTCGGGAATGCCTGCCAGAATTGTCACAACAACATCCACGGCTCCAACGCGCCGT
CCGGATCGCGCTGGCACCGATAG

Upstream 100 bases:

>100_bases
CTCAAAATGATCTTCGCTCGACGTCGCCCACGACACGTGGACGGCGATCGATAGTGGTCTGACAAAAATCATCGTGCTTT
GAGCACTTGCGGGGGACGGA

Downstream 100 bases:

>100_bases
CTCGGAGCCGGGGACAGCGACGGCTGCGGCCGCCGTCGCTCGCCACACCAACAAGCCGCGAAGGGTGATGGAACGACTCG
CGCGAAGGGGGCCTTGAAAT

Product: cytochrome C family protein

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Decaheme C-Type Cytochrome DmsE Family; Decaheme Cytochrome C MtrA; Decaheme Cytochrome C; Nitrate/TMAO Reductase; Doubled CXXCH Domain-Containing Protein; Cytochrome C; Multiheme Cytochrome; Multiheme C-Type Cytochrome; Cytochrome; Lipoprotein Cytochrome C; Decaheme Cytochrome C MtrD; Multiheme Cytochrome Family Protein; Double CXXCH Motif-Containing Protein; Cytochrome C-Type Protein NrfB

Number of amino acids: Translated: 540; Mature: 539

Protein sequence:

>540_residues
MGGSRGAAAARDQSRRGRRSWISSLFVSIALAWGTWPAGAEPAMVGHTALPHDGQVGAVDPSVNALVDYVRGLQSAGKTE
QNFTPVPAHGLALGDGHGGGHGGISGHGASAHGSPHGAAAAGPRFDTRFAGHGSTENLLALPQIDGGPQLEQSLRFTASL
RLTTLSEKRILRSHQTRHTLAARLAREPDYVAEMPEPVRDAATVTTWVALENFDDTIEQPKQFDFIEILAAKADDSRPVL
MVATREPRAAAAGRAPMVAPAPGDPDGRYFVGSKPCETCHAGLFDEFQQTVMGRNIKSGKVTPQGKMECETCHGPGSAHV
NGGGGREKGGIRSFRPTDSRGFDVAEANSVCLSCHEKGDQTYWQGSQHETRGLACVNCHTVMRKVSPRNQLKTVQVMDTC
FQCHKDRKAQVQRSSHMPIRETKITCVNCHNPHGSATEKLLREATVNDTCYTCHADKRGPFLFEHPPVRENCLNCHEPHG
SNHESLLIVARQRLCQQCHTNPHNQPGLPTSARWAVGNACQNCHNNIHGSNAPSGSRWHR

Sequences:

>Translated_540_residues
MGGSRGAAAARDQSRRGRRSWISSLFVSIALAWGTWPAGAEPAMVGHTALPHDGQVGAVDPSVNALVDYVRGLQSAGKTE
QNFTPVPAHGLALGDGHGGGHGGISGHGASAHGSPHGAAAAGPRFDTRFAGHGSTENLLALPQIDGGPQLEQSLRFTASL
RLTTLSEKRILRSHQTRHTLAARLAREPDYVAEMPEPVRDAATVTTWVALENFDDTIEQPKQFDFIEILAAKADDSRPVL
MVATREPRAAAAGRAPMVAPAPGDPDGRYFVGSKPCETCHAGLFDEFQQTVMGRNIKSGKVTPQGKMECETCHGPGSAHV
NGGGGREKGGIRSFRPTDSRGFDVAEANSVCLSCHEKGDQTYWQGSQHETRGLACVNCHTVMRKVSPRNQLKTVQVMDTC
FQCHKDRKAQVQRSSHMPIRETKITCVNCHNPHGSATEKLLREATVNDTCYTCHADKRGPFLFEHPPVRENCLNCHEPHG
SNHESLLIVARQRLCQQCHTNPHNQPGLPTSARWAVGNACQNCHNNIHGSNAPSGSRWHR
>Mature_539_residues
GGSRGAAAARDQSRRGRRSWISSLFVSIALAWGTWPAGAEPAMVGHTALPHDGQVGAVDPSVNALVDYVRGLQSAGKTEQ
NFTPVPAHGLALGDGHGGGHGGISGHGASAHGSPHGAAAAGPRFDTRFAGHGSTENLLALPQIDGGPQLEQSLRFTASLR
LTTLSEKRILRSHQTRHTLAARLAREPDYVAEMPEPVRDAATVTTWVALENFDDTIEQPKQFDFIEILAAKADDSRPVLM
VATREPRAAAAGRAPMVAPAPGDPDGRYFVGSKPCETCHAGLFDEFQQTVMGRNIKSGKVTPQGKMECETCHGPGSAHVN
GGGGREKGGIRSFRPTDSRGFDVAEANSVCLSCHEKGDQTYWQGSQHETRGLACVNCHTVMRKVSPRNQLKTVQVMDTCF
QCHKDRKAQVQRSSHMPIRETKITCVNCHNPHGSATEKLLREATVNDTCYTCHADKRGPFLFEHPPVRENCLNCHEPHGS
NHESLLIVARQRLCQQCHTNPHNQPGLPTSARWAVGNACQNCHNNIHGSNAPSGSRWHR

Specific function: Plays A Role In Nitrite Reduction. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58285; Mature: 58154

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGSRGAAAARDQSRRGRRSWISSLFVSIALAWGTWPAGAEPAMVGHTALPHDGQVGAVD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCC
PSVNALVDYVRGLQSAGKTEQNFTPVPAHGLALGDGHGGGHGGISGHGASAHGSPHGAAA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
AGPRFDTRFAGHGSTENLLALPQIDGGPQLEQSLRFTASLRLTTLSEKRILRSHQTRHTL
CCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHH
AARLAREPDYVAEMPEPVRDAATVTTWVALENFDDTIEQPKQFDFIEILAAKADDSRPVL
HHHHHCCCCHHHHCCCHHHHHHHHHHEEEECCCHHHHHCCCCCCHHHHHHHCCCCCCCEE
MVATREPRAAAAGRAPMVAPAPGDPDGRYFVGSKPCETCHAGLFDEFQQTVMGRNIKSGK
EEECCCCCHHHCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCC
VTPQGKMECETCHGPGSAHVNGGGGREKGGIRSFRPTDSRGFDVAEANSVCLSCHEKGDQ
CCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCC
TYWQGSQHETRGLACVNCHTVMRKVSPRNQLKTVQVMDTCFQCHKDRKAQVQRSSHMPIR
CCCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEE
ETKITCVNCHNPHGSATEKLLREATVNDTCYTCHADKRGPFLFEHPPVRENCLNCHEPHG
CCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCHHHHHCCCCCCCC
SNHESLLIVARQRLCQQCHTNPHNQPGLPTSARWAVGNACQNCHNNIHGSNAPSGSRWHR
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GGSRGAAAARDQSRRGRRSWISSLFVSIALAWGTWPAGAEPAMVGHTALPHDGQVGAVD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCC
PSVNALVDYVRGLQSAGKTEQNFTPVPAHGLALGDGHGGGHGGISGHGASAHGSPHGAAA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
AGPRFDTRFAGHGSTENLLALPQIDGGPQLEQSLRFTASLRLTTLSEKRILRSHQTRHTL
CCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHH
AARLAREPDYVAEMPEPVRDAATVTTWVALENFDDTIEQPKQFDFIEILAAKADDSRPVL
HHHHHCCCCHHHHCCCHHHHHHHHHHEEEECCCHHHHHCCCCCCHHHHHHHCCCCCCCEE
MVATREPRAAAAGRAPMVAPAPGDPDGRYFVGSKPCETCHAGLFDEFQQTVMGRNIKSGK
EEECCCCCHHHCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCC
VTPQGKMECETCHGPGSAHVNGGGGREKGGIRSFRPTDSRGFDVAEANSVCLSCHEKGDQ
CCCCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCC
TYWQGSQHETRGLACVNCHTVMRKVSPRNQLKTVQVMDTCFQCHKDRKAQVQRSSHMPIR
CCCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEE
ETKITCVNCHNPHGSATEKLLREATVNDTCYTCHADKRGPFLFEHPPVRENCLNCHEPHG
CCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCHHHHHCCCCCCCC
SNHESLLIVARQRLCQQCHTNPHNQPGLPTSARWAVGNACQNCHNNIHGSNAPSGSRWHR
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA