Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192289244

Identifier: 192289244

GI number: 192289244

Start: 857441

End: 859873

Strand: Reverse

Name: 192289244

Synonym: Rpal_0816

Alternate gene names: NA

Gene position: 859873-857441 (Counterclockwise)

Preceding gene: 192289245

Following gene: 192289243

Centisome position: 14.97

GC content: 61.9

Gene sequence:

>2433_bases
ATGGCGTTTAGGCAATTCCTGCTGACGTCCGCCGCAATCTCCGTGGTGACCGTAATACCGTTGAGCGCGACCGCCGAGAC
GGTGGCCAAGGAGGAGCCAGCGCGCTCGGTCCCCGATTTCGACGCGGCTCATGGCGGCTGGTCGTATTCGGGCGAATTCG
AAGCCGGCTGGCGCTCGTTCATCCAGCGCCCACCGAAATCGGCGACGCCCTGGGTGTCGCCGACCAATCCGACCGGCGGC
GGCGATCGCAACAACCGTTCGAAGTTCGAAGAGTACGGCCGGATCGCGCCAGGGTTCTATGCCGAATATCTGCGGATGAC
GCTGCAGACCAAGGACGGCACCTACTGGAATGAGCTCCGCGCCGACAATATCGGCAACAACAACCAGCGCTACATCTTCG
ACTTCTCGAAGGCCGGCGAGCACTACCTCACCCTGGGTTGGGATGAGATCCCACATCTCTACAACACCAGCGCGCTGAGC
ATCTGGAACGGCGTCGGCACCACCACACTGACGACGCCGGTCGCCATTCCCGGCAACACCCTGTCGATCGTCGCCCCGGC
GACCACCACCACGGCGGCGCAGCGCGCCGCCGTGACCAACGCGCTGGCCGGCAAGACCAATCTAATCGACGTCGGCATCG
ACCGCCGCAAGGGTAGCGCAGCCTATCGCTGGACACCCGATCCGAACTGGGACGTCAAAGCGAGCTACTCGCACGAGCAG
CGCGAAGGCACCCAAATCGCGGGCTTTCCGATCGGCGGTCTCGCCGGCACCGGACTGCAGCAGATGCAGGCGCCGCGACC
GATCGACGACACGACCCAGATCGGCAAACTCAGCGGCCAGTACTTCGGTCCGACCCCATGGGGCGGACACTACAACGTCC
AGGTCGGCGGCGGCTTCTCGCTTTACGACAACAGCTTCAATTCCTTCACGGTGCAGAATCCGTTCTTCGACCCCGCCAAT
CCGCGGGTGTTCTCGCCGGCGGCGCGGATCAGTCTGATGCCGAGCAATCAGGCCTATAACACCGGCGTCACCACCGGCAT
CGACCTGCCGTTCAAGACGCGCTGGAACAGCACGTTCCAGTACACCACGATGCGGCAGAACGAAGCCTTCATGCCGTTCA
CCGTGAATCCCAACATCACGACCTTCCTGCTGCCGGCTTCGAGCCTCAACGGCGAGGTCAACACCGCGCTCTACAACACC
ACTGCCACCACCCAGTGGACGCCGGAGTTCCGCACCACCACGCGCTATCGCTACTACGACAACGACAACCAGACGCCGGA
ATTGCTGATGCCGAATTACGTGGTCGAAGATTCGTCCGCGACGGGCATCGCCGCCGGCATCCCGCGGCGGTCACTGTCGA
TGTCCTACACCAAGCAGAACGCCAGCGGCGAAATGCAATGGCGCCCTGCCAAATGGGTCACATTCGGCAGCACCTTCGGT
TGGGAGCAATGGGATCGCAGCCGCCGCGACGCCAACGTCACCAACGAGTTCATCGGCAAGCTGACCGCGGACTTCAAGGT
CCACGACATCGCAACGCTGCGCACCAGCGGCCAGTATTCCGAACGCCGCTACGACAATTACGACGGCCTGGCGATGGCGC
GAGACACCTATTACAGCGCCACGGCTAACAACGGCACCAACCTGCTGATGCGCAAGTTCGACATGGCGAATCGCAACCAG
ACAAAAGCCAACGCTTTCCTCGACATTTCCGGTCCGGCCGGCAGCGTGTTCCGGGACTTCGTGATTTCACCGACCGCCGG
CCTGCGATTTGAGGACTACCCGGACGATCCGCTGTTCTTCGGCCTGAAGAAGAGCAACACCTGGAACGCCGGCATCGACA
TCACCTACAGCTTCACGCCAGGCTCCTCGATCCAGGCATCGTATCTGTACGAAACCTATGATCGCTTCCAGGTCGGCAGC
GGTACCTTGACCAACTCCGCCACCGGCCTTCCTAACGCCACCCCGATCAACGCGTTCGGCAGCAACACGCTCGAGAAAGT
GCAGACCATCCTGATCGCCAGCACGCTGGAGCTGATTCCCGGCGTGCTCGATTTCAAGCTCGGCTATGCGATCTCGTTCT
CGCACGAGGATTGGGACTACGGCCCCTATAACGGTTACGCGCTGCTGGCGAATGCCGGCGGCGCCGTATACCGCCCGTTC
CCGACGGTATCGACCAACTATCAGCGGCTCGATGCGTCGCTGAAGCACACGATCGATCCGTCGATCGTGGCGAAGCTGGG
ATGGACCGGAGAGGTCTATGTCAAGGCGCGCTACATCTGGGAGCGCAACAGCGTCGACAATTGGCAGCAGGATCTGATGT
CGCCCTACCTTTATCTGGTCGACACCACGCTGGCGCGAATGATCGACATGGGAGCCACCAATCCGAACTACGATGCGCAG
TACTTCCAGGTCTCGCTCAACGCCAAATGGTGA

Upstream 100 bases:

>100_bases
AGCTCGGAGCCGGGGACAGCGACGGCTGCGGCCGCCGTCGCTCGCCACACCAACAAGCCGCGAAGGGTGATGGAACGACT
CGCGCGAAGGGGGCCTTGAA

Downstream 100 bases:

>100_bases
GCGGCAGCGCCGTGATGTGGCGCCGCCTTCGCGACAGGATCGGCTCGCACGCGAACGCGGCGAGCTTGCAGCCGACGGCA
AAGACGTGGCCGCCGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Protein MtrB

Number of amino acids: Translated: 810; Mature: 809

Protein sequence:

>810_residues
MAFRQFLLTSAAISVVTVIPLSATAETVAKEEPARSVPDFDAAHGGWSYSGEFEAGWRSFIQRPPKSATPWVSPTNPTGG
GDRNNRSKFEEYGRIAPGFYAEYLRMTLQTKDGTYWNELRADNIGNNNQRYIFDFSKAGEHYLTLGWDEIPHLYNTSALS
IWNGVGTTTLTTPVAIPGNTLSIVAPATTTTAAQRAAVTNALAGKTNLIDVGIDRRKGSAAYRWTPDPNWDVKASYSHEQ
REGTQIAGFPIGGLAGTGLQQMQAPRPIDDTTQIGKLSGQYFGPTPWGGHYNVQVGGGFSLYDNSFNSFTVQNPFFDPAN
PRVFSPAARISLMPSNQAYNTGVTTGIDLPFKTRWNSTFQYTTMRQNEAFMPFTVNPNITTFLLPASSLNGEVNTALYNT
TATTQWTPEFRTTTRYRYYDNDNQTPELLMPNYVVEDSSATGIAAGIPRRSLSMSYTKQNASGEMQWRPAKWVTFGSTFG
WEQWDRSRRDANVTNEFIGKLTADFKVHDIATLRTSGQYSERRYDNYDGLAMARDTYYSATANNGTNLLMRKFDMANRNQ
TKANAFLDISGPAGSVFRDFVISPTAGLRFEDYPDDPLFFGLKKSNTWNAGIDITYSFTPGSSIQASYLYETYDRFQVGS
GTLTNSATGLPNATPINAFGSNTLEKVQTILIASTLELIPGVLDFKLGYAISFSHEDWDYGPYNGYALLANAGGAVYRPF
PTVSTNYQRLDASLKHTIDPSIVAKLGWTGEVYVKARYIWERNSVDNWQQDLMSPYLYLVDTTLARMIDMGATNPNYDAQ
YFQVSLNAKW

Sequences:

>Translated_810_residues
MAFRQFLLTSAAISVVTVIPLSATAETVAKEEPARSVPDFDAAHGGWSYSGEFEAGWRSFIQRPPKSATPWVSPTNPTGG
GDRNNRSKFEEYGRIAPGFYAEYLRMTLQTKDGTYWNELRADNIGNNNQRYIFDFSKAGEHYLTLGWDEIPHLYNTSALS
IWNGVGTTTLTTPVAIPGNTLSIVAPATTTTAAQRAAVTNALAGKTNLIDVGIDRRKGSAAYRWTPDPNWDVKASYSHEQ
REGTQIAGFPIGGLAGTGLQQMQAPRPIDDTTQIGKLSGQYFGPTPWGGHYNVQVGGGFSLYDNSFNSFTVQNPFFDPAN
PRVFSPAARISLMPSNQAYNTGVTTGIDLPFKTRWNSTFQYTTMRQNEAFMPFTVNPNITTFLLPASSLNGEVNTALYNT
TATTQWTPEFRTTTRYRYYDNDNQTPELLMPNYVVEDSSATGIAAGIPRRSLSMSYTKQNASGEMQWRPAKWVTFGSTFG
WEQWDRSRRDANVTNEFIGKLTADFKVHDIATLRTSGQYSERRYDNYDGLAMARDTYYSATANNGTNLLMRKFDMANRNQ
TKANAFLDISGPAGSVFRDFVISPTAGLRFEDYPDDPLFFGLKKSNTWNAGIDITYSFTPGSSIQASYLYETYDRFQVGS
GTLTNSATGLPNATPINAFGSNTLEKVQTILIASTLELIPGVLDFKLGYAISFSHEDWDYGPYNGYALLANAGGAVYRPF
PTVSTNYQRLDASLKHTIDPSIVAKLGWTGEVYVKARYIWERNSVDNWQQDLMSPYLYLVDTTLARMIDMGATNPNYDAQ
YFQVSLNAKW
>Mature_809_residues
AFRQFLLTSAAISVVTVIPLSATAETVAKEEPARSVPDFDAAHGGWSYSGEFEAGWRSFIQRPPKSATPWVSPTNPTGGG
DRNNRSKFEEYGRIAPGFYAEYLRMTLQTKDGTYWNELRADNIGNNNQRYIFDFSKAGEHYLTLGWDEIPHLYNTSALSI
WNGVGTTTLTTPVAIPGNTLSIVAPATTTTAAQRAAVTNALAGKTNLIDVGIDRRKGSAAYRWTPDPNWDVKASYSHEQR
EGTQIAGFPIGGLAGTGLQQMQAPRPIDDTTQIGKLSGQYFGPTPWGGHYNVQVGGGFSLYDNSFNSFTVQNPFFDPANP
RVFSPAARISLMPSNQAYNTGVTTGIDLPFKTRWNSTFQYTTMRQNEAFMPFTVNPNITTFLLPASSLNGEVNTALYNTT
ATTQWTPEFRTTTRYRYYDNDNQTPELLMPNYVVEDSSATGIAAGIPRRSLSMSYTKQNASGEMQWRPAKWVTFGSTFGW
EQWDRSRRDANVTNEFIGKLTADFKVHDIATLRTSGQYSERRYDNYDGLAMARDTYYSATANNGTNLLMRKFDMANRNQT
KANAFLDISGPAGSVFRDFVISPTAGLRFEDYPDDPLFFGLKKSNTWNAGIDITYSFTPGSSIQASYLYETYDRFQVGSG
TLTNSATGLPNATPINAFGSNTLEKVQTILIASTLELIPGVLDFKLGYAISFSHEDWDYGPYNGYALLANAGGAVYRPFP
TVSTNYQRLDASLKHTIDPSIVAKLGWTGEVYVKARYIWERNSVDNWQQDLMSPYLYLVDTTLARMIDMGATNPNYDAQY
FQVSLNAKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90014; Mature: 89883

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRQFLLTSAAISVVTVIPLSATAETVAKEEPARSVPDFDAAHGGWSYSGEFEAGWRSF
CCHHHHHHHHHHEEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
IQRPPKSATPWVSPTNPTGGGDRNNRSKFEEYGRIAPGFYAEYLRMTLQTKDGTYWNELR
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHEEEEECCCCCCHHHHC
ADNIGNNNQRYIFDFSKAGEHYLTLGWDEIPHLYNTSALSIWNGVGTTTLTTPVAIPGNT
CCCCCCCCCEEEEEECCCCCEEEEECHHHCCCHHCCCCEEEECCCCCCEEECEEEECCCE
LSIVAPATTTTAAQRAAVTNALAGKTNLIDVGIDRRKGSAAYRWTPDPNWDVKASYSHEQ
EEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCEEECCCCHH
REGTQIAGFPIGGLAGTGLQQMQAPRPIDDTTQIGKLSGQYFGPTPWGGHYNVQVGGGFS
CCCCEEECCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCEE
LYDNSFNSFTVQNPFFDPANPRVFSPAARISLMPSNQAYNTGVTTGIDLPFKTRWNSTFQ
EECCCCCEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCEEE
YTTMRQNEAFMPFTVNPNITTFLLPASSLNGEVNTALYNTTATTQWTPEFRTTTRYRYYD
EEEEECCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCEECCCCCCCEEEEEEC
NDNQTPELLMPNYVVEDSSATGIAAGIPRRSLSMSYTKQNASGEMQWRPAKWVTFGSTFG
CCCCCCCEECCCEEEECCCCCCEEECCCCCCCEEEEECCCCCCCEEECCCEEEEECCCCC
WEQWDRSRRDANVTNEFIGKLTADFKVHDIATLRTSGQYSERRYDNYDGLAMARDTYYSA
HHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCHHHHCCCCCCCEEEECCCEEEE
TANNGTNLLMRKFDMANRNQTKANAFLDISGPAGSVFRDFVISPTAGLRFEDYPDDPLFF
ECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEE
GLKKSNTWNAGIDITYSFTPGSSIQASYLYETYDRFQVGSGTLTNSATGLPNATPINAFG
EEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCC
SNTLEKVQTILIASTLELIPGVLDFKLGYAISFSHEDWDYGPYNGYALLANAGGAVYRPF
CHHHHHHHHHHHHHHHHHCCCHHEEEECEEEEECCCCCCCCCCCCEEEEEECCCCEECCC
PTVSTNYQRLDASLKHTIDPSIVAKLGWTGEVYVKARYIWERNSVDNWQQDLMSPYLYLV
CCCCCCHHHHCCHHHHCCCHHHHEECCCCCEEEEEEEEEEECCCCCHHHHHHHCHHHHHH
DTTLARMIDMGATNPNYDAQYFQVSLNAKW
HHHHHHHHHCCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure 
AFRQFLLTSAAISVVTVIPLSATAETVAKEEPARSVPDFDAAHGGWSYSGEFEAGWRSF
CHHHHHHHHHHEEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
IQRPPKSATPWVSPTNPTGGGDRNNRSKFEEYGRIAPGFYAEYLRMTLQTKDGTYWNELR
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHEEEEECCCCCCHHHHC
ADNIGNNNQRYIFDFSKAGEHYLTLGWDEIPHLYNTSALSIWNGVGTTTLTTPVAIPGNT
CCCCCCCCCEEEEEECCCCCEEEEECHHHCCCHHCCCCEEEECCCCCCEEECEEEECCCE
LSIVAPATTTTAAQRAAVTNALAGKTNLIDVGIDRRKGSAAYRWTPDPNWDVKASYSHEQ
EEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCEEECCCCHH
REGTQIAGFPIGGLAGTGLQQMQAPRPIDDTTQIGKLSGQYFGPTPWGGHYNVQVGGGFS
CCCCEEECCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCEE
LYDNSFNSFTVQNPFFDPANPRVFSPAARISLMPSNQAYNTGVTTGIDLPFKTRWNSTFQ
EECCCCCEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCEEE
YTTMRQNEAFMPFTVNPNITTFLLPASSLNGEVNTALYNTTATTQWTPEFRTTTRYRYYD
EEEEECCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCEECCCCCCCEEEEEEC
NDNQTPELLMPNYVVEDSSATGIAAGIPRRSLSMSYTKQNASGEMQWRPAKWVTFGSTFG
CCCCCCCEECCCEEEECCCCCCEEECCCCCCCEEEEECCCCCCCEEECCCEEEEECCCCC
WEQWDRSRRDANVTNEFIGKLTADFKVHDIATLRTSGQYSERRYDNYDGLAMARDTYYSA
HHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCHHHHCCCCCCCEEEECCCEEEE
TANNGTNLLMRKFDMANRNQTKANAFLDISGPAGSVFRDFVISPTAGLRFEDYPDDPLFF
ECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEE
GLKKSNTWNAGIDITYSFTPGSSIQASYLYETYDRFQVGSGTLTNSATGLPNATPINAFG
EEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCC
SNTLEKVQTILIASTLELIPGVLDFKLGYAISFSHEDWDYGPYNGYALLANAGGAVYRPF
CHHHHHHHHHHHHHHHHHCCCHHEEEECEEEEECCCCCCCCCCCCEEEEEECCCCEECCC
PTVSTNYQRLDASLKHTIDPSIVAKLGWTGEVYVKARYIWERNSVDNWQQDLMSPYLYLV
CCCCCCHHHHCCHHHHCCCHHHHEECCCCCEEEEEEEEEEECCCCCHHHHHHHCHHHHHH
DTTLARMIDMGATNPNYDAQYFQVSLNAKW
HHHHHHHHHCCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA