| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289243
Identifier: 192289243
GI number: 192289243
Start: 857017
End: 857301
Strand: Reverse
Name: 192289243
Synonym: Rpal_0815
Alternate gene names: NA
Gene position: 857301-857017 (Counterclockwise)
Preceding gene: 192289244
Following gene: 192289225
Centisome position: 14.93
GC content: 67.37
Gene sequence:
>285_bases ATGAACGACAAACGCAACGACCAGCCGCCTTTGTCGCGGCGCAAGCTCCTGAAGGCCGGCGTGGGCGCCGCGGGCATAGC CGCGATGCTCGGCGCCGGCGTGGCTGCGGCGAACGCCCAGGTCACCAAGAAGGCCTCGCACAAGGACGCCGGCTATCAGG AGTCGCCCAACGGCGCCAAACGTTGCGGCACCTGTCGCCAATTCCGGCCACCGAGCTCGTGCATCACCGTCGAGAGCCCG ATCAGCGAGAACGGCTGGTGCCGTCTCTACGCCGGCAAGGCATAA
Upstream 100 bases:
>100_bases TCGGCTCGCACGCGAACGCGGCGAGCTTGCAGCCGACGGCAAAGACGTGGCCGCCGGCCGATGCCAGCCAACGTCAACAA CAATGGGAGGACGACAGACG
Downstream 100 bases:
>100_bases CGCGCCGTTGATCACGTCATCTGCTGCGCACGGACGAGCGGCGCAGCGGTCGCAAGCTCCGGGTCCGATACAGTCGGAGC TGGAGCTTGCGTCATTGCTG
Product: iron oxidase oxidoreductase protein
Products: NA
Alternate protein names: High Potential Iron Sulfur Protein; Iron Oxidase Oxidoreductase Protein
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MNDKRNDQPPLSRRKLLKAGVGAAGIAAMLGAGVAAANAQVTKKASHKDAGYQESPNGAKRCGTCRQFRPPSSCITVESP ISENGWCRLYAGKA
Sequences:
>Translated_94_residues MNDKRNDQPPLSRRKLLKAGVGAAGIAAMLGAGVAAANAQVTKKASHKDAGYQESPNGAKRCGTCRQFRPPSSCITVESP ISENGWCRLYAGKA >Mature_94_residues MNDKRNDQPPLSRRKLLKAGVGAAGIAAMLGAGVAAANAQVTKKASHKDAGYQESPNGAKRCGTCRQFRPPSSCITVESP ISENGWCRLYAGKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9858; Mature: 9858
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS00596 HIPIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKRNDQPPLSRRKLLKAGVGAAGIAAMLGAGVAAANAQVTKKASHKDAGYQESPNGAK CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCHHH RCGTCRQFRPPSSCITVESPISENGWCRLYAGKA HCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCC >Mature Secondary Structure MNDKRNDQPPLSRRKLLKAGVGAAGIAAMLGAGVAAANAQVTKKASHKDAGYQESPNGAK CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCHHH RCGTCRQFRPPSSCITVESPISENGWCRLYAGKA HCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA