| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is phnH [H]
Identifier: 192289190
GI number: 192289190
Start: 803133
End: 803735
Strand: Reverse
Name: phnH [H]
Synonym: Rpal_0761
Alternate gene names: 192289190
Gene position: 803735-803133 (Counterclockwise)
Preceding gene: 192289191
Following gene: 192289189
Centisome position: 13.99
GC content: 65.84
Gene sequence:
>603_bases ATGACCACCACCGAACTTGCCGCCGGCTTTGCCGACAAGGTACTGGGGGCGCAATCGACCTTCCGCGCCGTGATGGAAGC GATGGCGCGGCCCGGCCGCATCCAACACATCAGCGTCGAGGCCGGCACACCGGCGCCGCTCATGCACGCCAGCGCCGCGC TGGCCTTGACGCTGTTCGATCACGATACCCCGATCTGGCTCGACGACGCGATCGCGGCGGACGGCACGGTCGCGCGCTGG CTGAAATTTCATACCGGTGCACCGCTGACCGACGATCCTTCTACCACGGCATTTGCGCTGATCGGTGATGGCTCAGCGTT GCTGCCGCTCGAGCGTTTCGCGCTCGGCACGCCCGAATATCCGGACCGTTCGACGACACTCATTATTCAAGTGCAGGCGC TCGGCTCCGACGACGGCTTCCGGTTGCGCGGTCCCGGCATCGACGGCGAGACGCTGCTACAGGCATCGCTACAGCCAGCC GACCTGTTTGATCGCCTGAGTATCAATGCGGCGCTGTTTCCGCGCGGCGTCGACGTGGTGCTGGTGAACGGCGATCAGGT GGTGGCGATCCCGCGCACCACGCGCCTCAGCCAAGGGAGCTGA
Upstream 100 bases:
>100_bases CGCTGCGCACCAAAGTCGAAGCCGCACGCGCCGAAAAGGCCGCCCAGACGGCGGCCACCAAGGTCGATTTCTACACGCTG GTGCGCGGAGAGGGCTGACC
Downstream 100 bases:
>100_bases CCGATGTATGTCGCAGTCAAAGGCGGCGAACGCGCCATCGACAATGCCCACCGGTTGCTCGCCGATGCGCGACGTGGGAA ACGCGACGTGCCGGAGCTGA
Product: carbon-phosphorus lyase complex subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTTTELAAGFADKVLGAQSTFRAVMEAMARPGRIQHISVEAGTPAPLMHASAALALTLFDHDTPIWLDDAIAADGTVARW LKFHTGAPLTDDPSTTAFALIGDGSALLPLERFALGTPEYPDRSTTLIIQVQALGSDDGFRLRGPGIDGETLLQASLQPA DLFDRLSINAALFPRGVDVVLVNGDQVVAIPRTTRLSQGS
Sequences:
>Translated_200_residues MTTTELAAGFADKVLGAQSTFRAVMEAMARPGRIQHISVEAGTPAPLMHASAALALTLFDHDTPIWLDDAIAADGTVARW LKFHTGAPLTDDPSTTAFALIGDGSALLPLERFALGTPEYPDRSTTLIIQVQALGSDDGFRLRGPGIDGETLLQASLQPA DLFDRLSINAALFPRGVDVVLVNGDQVVAIPRTTRLSQGS >Mature_199_residues TTTELAAGFADKVLGAQSTFRAVMEAMARPGRIQHISVEAGTPAPLMHASAALALTLFDHDTPIWLDDAIAADGTVARWL KFHTGAPLTDDPSTTAFALIGDGSALLPLERFALGTPEYPDRSTTLIIQVQALGSDDGFRLRGPGIDGETLLQASLQPAD LFDRLSINAALFPRGVDVVLVNGDQVVAIPRTTRLSQGS
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3625
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnH family [H]
Homologues:
Organism=Escherichia coli, GI1790538, Length=192, Percent_Identity=34.8958333333333, Blast_Score=106, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008772 [H]
Pfam domain/function: PF05845 PhnH [H]
EC number: NA
Molecular weight: Translated: 21118; Mature: 20987
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTELAAGFADKVLGAQSTFRAVMEAMARPGRIQHISVEAGTPAPLMHASAALALTLFD CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHCCEEEEEEEEE HDTPIWLDDAIAADGTVARWLKFHTGAPLTDDPSTTAFALIGDGSALLPLERFALGTPEY CCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEECCHHHHHCCCCCC PDRSTTLIIQVQALGSDDGFRLRGPGIDGETLLQASLQPADLFDRLSINAALFPRGVDVV CCCCEEEEEEEEEECCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHCCCEEECCCCCEEE LVNGDQVVAIPRTTRLSQGS EECCCEEEEECCCCCCCCCC >Mature Secondary Structure TTTELAAGFADKVLGAQSTFRAVMEAMARPGRIQHISVEAGTPAPLMHASAALALTLFD CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHCCEEEEEEEEE HDTPIWLDDAIAADGTVARWLKFHTGAPLTDDPSTTAFALIGDGSALLPLERFALGTPEY CCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEECCHHHHHCCCCCC PDRSTTLIIQVQALGSDDGFRLRGPGIDGETLLQASLQPADLFDRLSINAALFPRGVDVV CCCCEEEEEEEEEECCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHCCCEEECCCCCEEE LVNGDQVVAIPRTTRLSQGS EECCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]