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The map label for this gene is slyA [C]

Identifier: 192288947

GI number: 192288947

Start: 565434

End: 565919

Strand: Reverse

Name: slyA [C]

Synonym: Rpal_0517

Alternate gene names: 192288947

Gene position: 565919-565434 (Counterclockwise)

Preceding gene: 192288951

Following gene: 192288946

Centisome position: 9.85

GC content: 67.49

Gene sequence:

>486_bases
ATGACCCGGGGCCCGGAAGACCAGAACTTCATCTTCGCGTTCGCCGAGGCGCAGCGGCTGCTGCGCGCCTATGCGGACAA
GCAGGCCTCCCGGCACGGCATCACCCGCGCCCAATGGGCGGTGCTGGCCAAGGTTGAGCGCGCCGAAGGGCTGAAGCAGT
CCGAACTCGCCGAACAGATGGAACTGCAGCCGATCACGCTGACCCGGCTGATCGACAAGCTGTGCGACCACGGCTGGCTG
GAACGCCGCAGCGACGACAGCGACCGGCGCTGCAAACGGCTCTACCTGCGCGAGGCGGCCCGGCCGCTGCTCGGCAAGCT
CGCCGGCCTCCGCGCCGAACTCACCGACACCGCGCTCGCCGGCCTGACGCCGGAGGATGCCCAGCGCCTGGTGCGGCAGA
TGCAGATCATCAAAGAAAATTTGCGGGGCGCGATCCAACACCACTGCCACCGCGAAGAAAAACGACGGGAGGAGCACTAT
GGCTGA

Upstream 100 bases:

>100_bases
GGTTTGCGAGGCATGCGCAGCTTGGATCGATCCTATGCGAATCGGCGCCTTGAGAAATAATAAGCTTGCTTATCTTATTC
GAAGCTTAGGAGGCAGCGGT

Downstream 100 bases:

>100_bases
ACCGGCGCTAAAATTTCCGACCGAGCAGCAGGAGCCTGCGGCGGATCCGGCCGTCGCCACGAGTGGCGGACCGCGCCGCG
GTATCGGCGGCACGCTGCGT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator Protein

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTRGPEDQNFIFAFAEAQRLLRAYADKQASRHGITRAQWAVLAKVERAEGLKQSELAEQMELQPITLTRLIDKLCDHGWL
ERRSDDSDRRCKRLYLREAARPLLGKLAGLRAELTDTALAGLTPEDAQRLVRQMQIIKENLRGAIQHHCHREEKRREEHY
G

Sequences:

>Translated_161_residues
MTRGPEDQNFIFAFAEAQRLLRAYADKQASRHGITRAQWAVLAKVERAEGLKQSELAEQMELQPITLTRLIDKLCDHGWL
ERRSDDSDRRCKRLYLREAARPLLGKLAGLRAELTDTALAGLTPEDAQRLVRQMQIIKENLRGAIQHHCHREEKRREEHY
G
>Mature_160_residues
TRGPEDQNFIFAFAEAQRLLRAYADKQASRHGITRAQWAVLAKVERAEGLKQSELAEQMELQPITLTRLIDKLCDHGWLE
RRSDDSDRRCKRLYLREAARPLLGKLAGLRAELTDTALAGLTPEDAQRLVRQMQIIKENLRGAIQHHCHREEKRREEHYG

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18667; Mature: 18535

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGPEDQNFIFAFAEAQRLLRAYADKQASRHGITRAQWAVLAKVERAEGLKQSELAEQM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH
ELQPITLTRLIDKLCDHGWLERRSDDSDRRCKRLYLREAARPLLGKLAGLRAELTDTALA
CCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLTPEDAQRLVRQMQIIKENLRGAIQHHCHREEKRREEHYG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRGPEDQNFIFAFAEAQRLLRAYADKQASRHGITRAQWAVLAKVERAEGLKQSELAEQM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH
ELQPITLTRLIDKLCDHGWLERRSDDSDRRCKRLYLREAARPLLGKLAGLRAELTDTALA
CCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLTPEDAQRLVRQMQIIKENLRGAIQHHCHREEKRREEHYG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA