| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is lnt [H]
Identifier: 192288879
GI number: 192288879
Start: 482968
End: 484578
Strand: Reverse
Name: lnt [H]
Synonym: Rpal_0448
Alternate gene names: 192288879
Gene position: 484578-482968 (Counterclockwise)
Preceding gene: 192288880
Following gene: 192288878
Centisome position: 8.44
GC content: 64.56
Gene sequence:
>1611_bases GTGACGCGTCGGGGTGTGCTGAGCCGGATCGCCTCGGGCATCATCCTGGCGTGGGGCTGGAAACGCGCCGTGATCGCGCT GCTGGCCGGCGCACTCTCCTCGCTGGCCATGGAGCCGTTCAACGCCTGGCCGGTTCTGTTCATCACCTTCCCGATCGCGG TGTGGCTGATCGACGGCTCTGCGGCCGGGAAGCGGCGCGGCGTGCCGGCTGCGGCGATGGCCGGCTGGTGGTTCGGCTTT GGTTATTTCGTCCCCGGCCTGTACTGGATCGGCTACGCGTTTCTGGTCGATGCCGACACCTTCGCCTGGCTGCTGCCGGC CGCGATCTGTGGCTTGCCGGCCTATCTGGCGCTGTTCACGGCGCTCGGCTTCGCCCTGGCTCGGCTGTTGTGGCGCCCGG ATAGTCTGCGCATCCTGTCGCTCGCCGTCAGCCTGACGATCAGCGAGTGGCTGCGCGGCCATCTGCTCACCGGCTTTCCC TGGAATGCGTTCGGCTACGCCCTGACCGAGCCGCTGGCGCTGGCGCAGAGCATCTCAGTGATCGGCATCTGGGGACTGAC CCTGCTGACGGTGGCGATCTTCGCCTCGCCTGCGGCGCTGATCGATGGCGGCACCAACGCCAGGCGGCGCTGGGCAGTGC CGGCGATGGCGCTGGGCGTGCTGGCCGCGATGGCAGTGTTTGGCGGCATTCGACTCAAATTGTCGCCGACCCAGCTCGTC GACAACGTCCGGCTGCGGATCATGCAGCCCAACCTGCCGCAGGACGCCCGCTTCAATTATTCGGCCAAAGCCGACGTGAT GCAGAAATATCTGTCACTGTCGGACCGCTCGACAGGGCCAAAATCGACCGGCGTTCGCGACGTCTCGCTGCTGATCTGGC CGGAATCGGCGTTTCCGTTCTTCCTGTCGCGAGAAGCGGATGCGATGGCGCAGATCGCAGAGCTGTTGCCGAAAGGCACC GTGCTGCTGACCGGGGCGGTCCGCCCGCCTGAATTACCGCCGGGGCGCCGGATTACCCGCGCTTACAATTCGATCTATGC GATCGACCATGATGGCAGCATTTTGTCGGTCTACGACAAACTCCATCTGGTCCCATTCGGCGAATTTCTGCCGTACCAGA ATCTGATGGAGAAGATCGGCTTCGTCCAACTCACCAAGGTGCAGGGCGGATTTTTATCCGGTGTGGCGCGTCATAACCTC GAACTGCCCAACGCCCCGCCGCTGCTGCCGCTGATCTGTTACGAGGCGATCTTTCCGGACGAAATTGCGATCGGCAACAA CCGTCCCGGCTGGATGCTGAATCTCACAAACGACGGCTGGTTCGGCATTTCCAGCGGCCCCTATCAACACCTGCAGCAGG CGCGGATGCGCGCCATCGAGCAGGGCCTGCCGCTCGTTCGCGCAGCGAACACCGGCGTTTCTGCAGTGATCGATCCGGTC GGACGGATCGTCGCAGAGCTCGGCCTCGGCCTCGAAGGGGTGCTGGATTCGGGGCTGCCCGCGCCCGTCGCGCCGACGAT CTATGCGCGGGTCGGCGAACTTCCTGCAGCCGTGCTGGTTGCGTTAGTGATGATGCTTGTACTATTACGAAAGCGCCCGC CGGGCTCGTGA
Upstream 100 bases:
>100_bases GCCGGCGGCGCGAGACCGCGACCGATTCCGCCGCGCCGCAGACTACTGACAGCGGCGGATCCACCTCCTCTCCACCTGCC GGCGACGGGACCGGTTCGCC
Downstream 100 bases:
>100_bases TAATACGCAGATCGGTGACGCAACCAGAGATTAAGTTCGAGAAAATTCGCACTCTCGCAGCCCGCGAATTTTCCTCGGCG TAAATTAACGCCGAATCCCC
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MTRRGVLSRIASGIILAWGWKRAVIALLAGALSSLAMEPFNAWPVLFITFPIAVWLIDGSAAGKRRGVPAAAMAGWWFGF GYFVPGLYWIGYAFLVDADTFAWLLPAAICGLPAYLALFTALGFALARLLWRPDSLRILSLAVSLTISEWLRGHLLTGFP WNAFGYALTEPLALAQSISVIGIWGLTLLTVAIFASPAALIDGGTNARRRWAVPAMALGVLAAMAVFGGIRLKLSPTQLV DNVRLRIMQPNLPQDARFNYSAKADVMQKYLSLSDRSTGPKSTGVRDVSLLIWPESAFPFFLSREADAMAQIAELLPKGT VLLTGAVRPPELPPGRRITRAYNSIYAIDHDGSILSVYDKLHLVPFGEFLPYQNLMEKIGFVQLTKVQGGFLSGVARHNL ELPNAPPLLPLICYEAIFPDEIAIGNNRPGWMLNLTNDGWFGISSGPYQHLQQARMRAIEQGLPLVRAANTGVSAVIDPV GRIVAELGLGLEGVLDSGLPAPVAPTIYARVGELPAAVLVALVMMLVLLRKRPPGS
Sequences:
>Translated_536_residues MTRRGVLSRIASGIILAWGWKRAVIALLAGALSSLAMEPFNAWPVLFITFPIAVWLIDGSAAGKRRGVPAAAMAGWWFGF GYFVPGLYWIGYAFLVDADTFAWLLPAAICGLPAYLALFTALGFALARLLWRPDSLRILSLAVSLTISEWLRGHLLTGFP WNAFGYALTEPLALAQSISVIGIWGLTLLTVAIFASPAALIDGGTNARRRWAVPAMALGVLAAMAVFGGIRLKLSPTQLV DNVRLRIMQPNLPQDARFNYSAKADVMQKYLSLSDRSTGPKSTGVRDVSLLIWPESAFPFFLSREADAMAQIAELLPKGT VLLTGAVRPPELPPGRRITRAYNSIYAIDHDGSILSVYDKLHLVPFGEFLPYQNLMEKIGFVQLTKVQGGFLSGVARHNL ELPNAPPLLPLICYEAIFPDEIAIGNNRPGWMLNLTNDGWFGISSGPYQHLQQARMRAIEQGLPLVRAANTGVSAVIDPV GRIVAELGLGLEGVLDSGLPAPVAPTIYARVGELPAAVLVALVMMLVLLRKRPPGS >Mature_535_residues TRRGVLSRIASGIILAWGWKRAVIALLAGALSSLAMEPFNAWPVLFITFPIAVWLIDGSAAGKRRGVPAAAMAGWWFGFG YFVPGLYWIGYAFLVDADTFAWLLPAAICGLPAYLALFTALGFALARLLWRPDSLRILSLAVSLTISEWLRGHLLTGFPW NAFGYALTEPLALAQSISVIGIWGLTLLTVAIFASPAALIDGGTNARRRWAVPAMALGVLAAMAVFGGIRLKLSPTQLVD NVRLRIMQPNLPQDARFNYSAKADVMQKYLSLSDRSTGPKSTGVRDVSLLIWPESAFPFFLSREADAMAQIAELLPKGTV LLTGAVRPPELPPGRRITRAYNSIYAIDHDGSILSVYDKLHLVPFGEFLPYQNLMEKIGFVQLTKVQGGFLSGVARHNLE LPNAPPLLPLICYEAIFPDEIAIGNNRPGWMLNLTNDGWFGISSGPYQHLQQARMRAIEQGLPLVRAANTGVSAVIDPVG RIVAELGLGLEGVLDSGLPAPVAPTIYARVGELPAAVLVALVMMLVLLRKRPPGS
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=535, Percent_Identity=32.5233644859813, Blast_Score=171, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 57981; Mature: 57850
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRGVLSRIASGIILAWGWKRAVIALLAGALSSLAMEPFNAWPVLFITFPIAVWLIDGS CCCHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCC AAGKRRGVPAAAMAGWWFGFGYFVPGLYWIGYAFLVDADTFAWLLPAAICGLPAYLALFT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHH ALGFALARLLWRPDSLRILSLAVSLTISEWLRGHLLTGFPWNAFGYALTEPLALAQSISV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH IGIWGLTLLTVAIFASPAALIDGGTNARRRWAVPAMALGVLAAMAVFGGIRLKLSPTQLV HHHHHHHHHHHHHHHCCHHEECCCCCCCHHHCHHHHHHHHHHHHHHHCCCEEEECHHHHH DNVRLRIMQPNLPQDARFNYSAKADVMQKYLSLSDRSTGPKSTGVRDVSLLIWPESAFPF CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCH FLSREADAMAQIAELLPKGTVLLTGAVRPPELPPGRRITRAYNSIYAIDHDGSILSVYDK HHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCEEEECCCCCEEEEEHH LHLVPFGEFLPYQNLMEKIGFVQLTKVQGGFLSGVARHNLELPNAPPLLPLICYEAIFPD HEECCCHHHCCHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC EIAIGNNRPGWMLNLTNDGWFGISSGPYQHLQQARMRAIEQGLPLVRAANTGVSAVIDPV CEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH GRIVAELGLGLEGVLDSGLPAPVAPTIYARVGELPAAVLVALVMMLVLLRKRPPGS HHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TRRGVLSRIASGIILAWGWKRAVIALLAGALSSLAMEPFNAWPVLFITFPIAVWLIDGS CCHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCC AAGKRRGVPAAAMAGWWFGFGYFVPGLYWIGYAFLVDADTFAWLLPAAICGLPAYLALFT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHH ALGFALARLLWRPDSLRILSLAVSLTISEWLRGHLLTGFPWNAFGYALTEPLALAQSISV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH IGIWGLTLLTVAIFASPAALIDGGTNARRRWAVPAMALGVLAAMAVFGGIRLKLSPTQLV HHHHHHHHHHHHHHHCCHHEECCCCCCCHHHCHHHHHHHHHHHHHHHCCCEEEECHHHHH DNVRLRIMQPNLPQDARFNYSAKADVMQKYLSLSDRSTGPKSTGVRDVSLLIWPESAFPF CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCH FLSREADAMAQIAELLPKGTVLLTGAVRPPELPPGRRITRAYNSIYAIDHDGSILSVYDK HHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCEEEECCCCCEEEEEHH LHLVPFGEFLPYQNLMEKIGFVQLTKVQGGFLSGVARHNLELPNAPPLLPLICYEAIFPD HEECCCHHHCCHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC EIAIGNNRPGWMLNLTNDGWFGISSGPYQHLQQARMRAIEQGLPLVRAANTGVSAVIDPV CEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH GRIVAELGLGLEGVLDSGLPAPVAPTIYARVGELPAAVLVALVMMLVLLRKRPPGS HHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA