| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is katG [H]
Identifier: 192288864
GI number: 192288864
Start: 463325
End: 465535
Strand: Reverse
Name: katG [H]
Synonym: Rpal_0433
Alternate gene names: 192288864
Gene position: 465535-463325 (Counterclockwise)
Preceding gene: 192288866
Following gene: 192288863
Centisome position: 8.1
GC content: 65.85
Gene sequence:
>2211_bases ATGGACGCAAAGACGGACGACAAGGGCGCAGGCAAGTGCCCGTTCTCGGGCGGCAGCCACGGCCATCGCAACCGTGACTG GTGGCCGGATCAGCTCGACATTTCGGTGCTGCACAACAATTCGAAGAAGTCCGACCCGATGGGTGCGGCGTTCAATTACG CCGAAGAGTTCAAGAAGCTCGATCTGGAAGCGGTGAAGAAGGACCTTCACGCGCTGATGACCGATTCGCAGGAATGGTGG CCGGCCGACTTCGGTCACTACGGTGGCCTGTTCGTCCGCATGGCCTGGCACTCGGCCGGCACCTATCGCATCACCGACGG CCGTGGCGGTGCCGGCGCCGGCCAGCAGCGCTTCGCGCCGCTGAACTCGTGGCCGGACAACGCCAACCTCGACAAGGCCC GCCGTCTGCTGTGGCCGATCAAGCAGAAATACGGCAGCAAGATCTCCTGGGCCGACCTCATGGTCCTCACCGGCAACGTC GCGCTGGAATCGATGGGCTTCAAGACTTTCGGCTTCGCCGGCGGTCGCGCCGACGTCTGGGAGCCGGAAGAGCTATATTG GGGCCCGGAAGGCACCTGGCTGGGCGACGAGCGCTATTCCGGCGAACGCCAGCTCGCCGAGCCGCTCGGCGCTGTGCAGA TGGGCCTGATCTACGTCAACCCCGAAGGCCCGAACGGCAATCCCGACCCGGTCGCCGCCGCCAAGGACATCCGTGAGACG TTCGCCCGCATGGCGATGGACGACGAAGAGACCGTGGCGTTGATCGCCGGCGGCCACACCTTCGGCAAGACCCACGGCGC CGGCGATCCGTCGCTGATCGGGCCGGCTCCGGAAGGCGGGCTGCTCGAGGAGCAGGGCCTCGGCTGGACCAGCAAGTACG GCAGCGGCTTTGGCGCCGACGCCATCACGGGCGGCCCGGAAGTGATCTGGACCCAGACTCCGACGCAGTGGAGCAACCAC TTCTTCGAGAATCTGTTCGGCTTCGAATGGGAGCTCGACAAGAGCCCGGCCGGCGCCAAGCAGTGGAAGGCCAAGGGCGC CGAAGCAACCGTGCCGGATCCGTTCGATCCCGCCAAGAAGCGCGTGCCGACGATGCTGACGACCGACCTGTCGCTGCGCT TCGACCCGATCTACGAAAAGATCTCGCGTCGCTTCCTGGAGAATCCCGATCAGTTCGCCGACGCGTTCGCCCGCGCCTGG TTCAAGCTGACCCACCGCGACATGGGACCGCGCGAGCGCTACCTCGGCCCGGAAGTGCCGAAGGAAGAGCTGATCTGGCA GGACCCGATCCCGGCCGTGAACCACGAACTGGTCGGCGAGGCCGATATCGAAGCGCTGAAGGCGAAGATCCTCGCCTCCG GTCTGTCGGTGGCGCAGCTCGTCTCCACCGCGTGGGCGTCCGCCTCGACCTTCCGCGGCTCGGACAAGCGCGGCGGCGCC AACGGCGCGCGCATCCGCCTGGCTCCGCAGAAGGACTGGGAGGTCAACCAACCGGCCGAGCTGGCGCAGGTGCTCAGCAA ACTCGAAGCGATCCAGGGCGAGTTCAACGGCGCGCAGAAGGACGGCAAGAAGGTCTCGCTCGCCGACCTGATCGTGCTCG GCGGCGCCGCGGCAATCGAGAAGGCTGCCAAGGACGCCGGCACCGCCGTCAAGGTGCCGTTCACGCCGGGCCGGATGGAT GCTTCGGCAGAGCAGACCGACGTCGAGTCGTTCAAGGTGCTGGAGCCGCGGGCCGATGGCTTCCGCAACTACATCAACAC CAAGCGGCATCAGTTCATGCATCCGGAAGAGGCGCTGGTCGACAAGGCTCAGCTCCTCACGCTCACCGGGCCTGAACTGA CGGTGCTGGTCGGCGGCCTGCGCGTGCTCGGCGCCAACTACGCGCACTCGACCCACGGCGTGCTCACCGAACGACCCGAG AAGTTGACTAACGACTTCTTCGTCAACCTGCTCGACATGGGCACCAAGTGGACCAAGGCGAACGGCGAGGTCGAGATCTA CGAAGGCCGCGACCGCAAGAACGGCGAACTGAAGTGGACCGGCACTCGCGTCGATCTGGTCTTCGGCTCGCACTCCCAGC TCCGCGCCTTTGCCGAGGTGTATGCGTGCTCGGATGCGCAGGAGAAGTTCGTCAGCGACTTCGTCGCCGCCTGGAGCAAG GTGATGAACGCCGATCGGTTCGACATCGTCGCCAAGAAGCAGGCGGCCTGA
Upstream 100 bases:
>100_bases GTTCAATTCGATCCCGGCCCTGGCCTGCGTCATGAAACCTTCCAAGGACGCCAGCACATTGAGCCGGGAAGAAACTGCAA CGCGAGATCGGAGAGACACC
Downstream 100 bases:
>100_bases TCGCCGCTGATGCAGCTATGAGTAGGAAAGGGCGGCCTTCGGGTCGCCCTTTTGCGTTTCCGCGAGCGGACCTGATAGCA ACGCTGGATGGACGCGAACC
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase [H]
Number of amino acids: Translated: 736; Mature: 736
Protein sequence:
>736_residues MDAKTDDKGAGKCPFSGGSHGHRNRDWWPDQLDISVLHNNSKKSDPMGAAFNYAEEFKKLDLEAVKKDLHALMTDSQEWW PADFGHYGGLFVRMAWHSAGTYRITDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNV ALESMGFKTFGFAGGRADVWEPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRET FARMAMDDEETVALIAGGHTFGKTHGAGDPSLIGPAPEGGLLEEQGLGWTSKYGSGFGADAITGGPEVIWTQTPTQWSNH FFENLFGFEWELDKSPAGAKQWKAKGAEATVPDPFDPAKKRVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAW FKLTHRDMGPRERYLGPEVPKEELIWQDPIPAVNHELVGEADIEALKAKILASGLSVAQLVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEVNQPAELAQVLSKLEAIQGEFNGAQKDGKKVSLADLIVLGGAAAIEKAAKDAGTAVKVPFTPGRMD ASAEQTDVESFKVLEPRADGFRNYINTKRHQFMHPEEALVDKAQLLTLTGPELTVLVGGLRVLGANYAHSTHGVLTERPE KLTNDFFVNLLDMGTKWTKANGEVEIYEGRDRKNGELKWTGTRVDLVFGSHSQLRAFAEVYACSDAQEKFVSDFVAAWSK VMNADRFDIVAKKQAA
Sequences:
>Translated_736_residues MDAKTDDKGAGKCPFSGGSHGHRNRDWWPDQLDISVLHNNSKKSDPMGAAFNYAEEFKKLDLEAVKKDLHALMTDSQEWW PADFGHYGGLFVRMAWHSAGTYRITDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNV ALESMGFKTFGFAGGRADVWEPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRET FARMAMDDEETVALIAGGHTFGKTHGAGDPSLIGPAPEGGLLEEQGLGWTSKYGSGFGADAITGGPEVIWTQTPTQWSNH FFENLFGFEWELDKSPAGAKQWKAKGAEATVPDPFDPAKKRVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAW FKLTHRDMGPRERYLGPEVPKEELIWQDPIPAVNHELVGEADIEALKAKILASGLSVAQLVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEVNQPAELAQVLSKLEAIQGEFNGAQKDGKKVSLADLIVLGGAAAIEKAAKDAGTAVKVPFTPGRMD ASAEQTDVESFKVLEPRADGFRNYINTKRHQFMHPEEALVDKAQLLTLTGPELTVLVGGLRVLGANYAHSTHGVLTERPE KLTNDFFVNLLDMGTKWTKANGEVEIYEGRDRKNGELKWTGTRVDLVFGSHSQLRAFAEVYACSDAQEKFVSDFVAAWSK VMNADRFDIVAKKQAA >Mature_736_residues MDAKTDDKGAGKCPFSGGSHGHRNRDWWPDQLDISVLHNNSKKSDPMGAAFNYAEEFKKLDLEAVKKDLHALMTDSQEWW PADFGHYGGLFVRMAWHSAGTYRITDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNV ALESMGFKTFGFAGGRADVWEPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRET FARMAMDDEETVALIAGGHTFGKTHGAGDPSLIGPAPEGGLLEEQGLGWTSKYGSGFGADAITGGPEVIWTQTPTQWSNH FFENLFGFEWELDKSPAGAKQWKAKGAEATVPDPFDPAKKRVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAW FKLTHRDMGPRERYLGPEVPKEELIWQDPIPAVNHELVGEADIEALKAKILASGLSVAQLVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEVNQPAELAQVLSKLEAIQGEFNGAQKDGKKVSLADLIVLGGAAAIEKAAKDAGTAVKVPFTPGRMD ASAEQTDVESFKVLEPRADGFRNYINTKRHQFMHPEEALVDKAQLLTLTGPELTVLVGGLRVLGANYAHSTHGVLTERPE KLTNDFFVNLLDMGTKWTKANGEVEIYEGRDRKNGELKWTGTRVDLVFGSHSQLRAFAEVYACSDAQEKFVSDFVAAWSK VMNADRFDIVAKKQAA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity [H]
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790378, Length=727, Percent_Identity=63.1361760660248, Blast_Score=892, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 [H]
Pfam domain/function: PF00141 peroxidase [H]
EC number: =1.11.1.6; =1.11.1.7 [H]
Molecular weight: Translated: 80887; Mature: 80887
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00435 PEROXIDASE_1 ; PS00436 PEROXIDASE_2 ; PS50873 PEROXIDASE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAKTDDKGAGKCPFSGGSHGHRNRDWWPDQLDISVLHNNSKKSDPMGAAFNYAEEFKKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHC DLEAVKKDLHALMTDSQEWWPADFGHYGGLFVRMAWHSAGTYRITDGRGGAGAGQQRFAP CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCC LNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNVALESMGFKTFGFAGGRADVW CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCHHHHCCCEEEECCCCCCCCC EPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRET CHHHEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCHHHHHHHHHH FARMAMDDEETVALIAGGHTFGKTHGAGDPSLIGPAPEGGLLEEQGLGWTSKYGSGFGAD HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCCCCCC AITGGPEVIWTQTPTQWSNHFFENLFGFEWELDKSPAGAKQWKAKGAEATVPDPFDPAKK CCCCCCCEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHH RVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAWFKLTHRDMGPRERYLGPEVP HCCEEEEECCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC KEELIWQDPIPAVNHELVGEADIEALKAKILASGLSVAQLVSTAWASASTFRGSDKRGGA HHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHCCCCCCCCCC NGARIRLAPQKDWEVNQPAELAQVLSKLEAIQGEFNGAQKDGKKVSLADLIVLGGAAAIE CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCHHHHH KAAKDAGTAVKVPFTPGRMDASAEQTDVESFKVLEPRADGFRNYINTKRHQFMHPEEALV HHHHCCCCEEEECCCCCCCCCCCCHHCCCHHEEECCCHHHHHHHHHHHHHHCCCCHHHHH DKAQLLTLTGPELTVLVGGLRVLGANYAHSTHGVLTERPEKLTNDFFVNLLDMGTKWTKA CCHHEEEECCCCEEEEEHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCEEECC NGEVEIYEGRDRKNGELKWTGTRVDLVFGSHSQLRAFAEVYACSDAQEKFVSDFVAAWSK CCCEEEEECCCCCCCEEEEECEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VMNADRFDIVAKKQAA HHCCCHHEEEECCCCC >Mature Secondary Structure MDAKTDDKGAGKCPFSGGSHGHRNRDWWPDQLDISVLHNNSKKSDPMGAAFNYAEEFKKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHC DLEAVKKDLHALMTDSQEWWPADFGHYGGLFVRMAWHSAGTYRITDGRGGAGAGQQRFAP CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCC LNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNVALESMGFKTFGFAGGRADVW CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCHHHHCCCEEEECCCCCCCCC EPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRET CHHHEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCHHHHHHHHHH FARMAMDDEETVALIAGGHTFGKTHGAGDPSLIGPAPEGGLLEEQGLGWTSKYGSGFGAD HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCCCCCC AITGGPEVIWTQTPTQWSNHFFENLFGFEWELDKSPAGAKQWKAKGAEATVPDPFDPAKK CCCCCCCEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHH RVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAWFKLTHRDMGPRERYLGPEVP HCCEEEEECCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC KEELIWQDPIPAVNHELVGEADIEALKAKILASGLSVAQLVSTAWASASTFRGSDKRGGA HHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHCCCCCCCCCC NGARIRLAPQKDWEVNQPAELAQVLSKLEAIQGEFNGAQKDGKKVSLADLIVLGGAAAIE CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCHHHHH KAAKDAGTAVKVPFTPGRMDASAEQTDVESFKVLEPRADGFRNYINTKRHQFMHPEEALV HHHHCCCCEEEECCCCCCCCCCCCHHCCCHHEEECCCHHHHHHHHHHHHHHCCCCHHHHH DKAQLLTLTGPELTVLVGGLRVLGANYAHSTHGVLTERPEKLTNDFFVNLLDMGTKWTKA CCHHEEEECCCCEEEEEHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCEEECC NGEVEIYEGRDRKNGELKWTGTRVDLVFGSHSQLRAFAEVYACSDAQEKFVSDFVAAWSK CCCEEEEECCCCCCCEEEEECEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VMNADRFDIVAKKQAA HHCCCHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA