| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288863
Identifier: 192288863
GI number: 192288863
Start: 462579
End: 463097
Strand: Reverse
Name: 192288863
Synonym: Rpal_0432
Alternate gene names: NA
Gene position: 463097-462579 (Counterclockwise)
Preceding gene: 192288864
Following gene: 192288859
Centisome position: 8.06
GC content: 63.01
Gene sequence:
>519_bases ATGCTGCTTCGTCTGCCTGTGATCACCGCTGCGATGTTGGCCGTTGTCGGCCTCGCTCATGCCGATGACGATGAGCTGGC GATTCAAGGCATTGGAATCAGCCGCGACATCGACTGTCAGGGTAAGAATGTCGGCGTGTACGGCGCAGAGAACGAGATCG CTCTGACCGGCCAATGCCGCACCATCACCGTGCATGGCAGCAAGCACAAGGTCAGTTTCGAGCAGGGGCAGACGCTGTCG GTGTCGGGCTCGGACAACACCGTCAACGGCGGCCGCGCCAAAGACGTCGTGGTCAGCGTGGCGAAGAACACCGTGACGAC GACGTTGGAAGCCGGCGACGAGCCGGGCACGCTAAAAGCCACCGGCGCCAATAACAAGATCACGCTGGTGCTGTCCGGCC CGTCGCGGCTGGACGTCGGCGGCGTCGAGCAGGTCGTCGAGTGGTCGAAGGCAGACGGCGCGCCCAATCCCGAAGTCCGC TCGTCCGGCGCGCTGAATTCGATCAAGCGGAAGAAGTAA
Upstream 100 bases:
>100_bases GTTCCGCGCGCCGTTCCGGTTCCATTTTTCTGCCGTGCGTTGACGATACTTGATCGGTTTGCTTTCCTTTGCGTCCCTTC AACAACGCAAGGATGTCTTG
Downstream 100 bases:
>100_bases GCACGGCGCCTGCCGGCTGCATCTCCGCTTTCGCCAGGATGACCGATGCTGCGACGCGCGTCGCCCTCACCCCAGGCACG GCAGCGGCGTTCGCCGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MLLRLPVITAAMLAVVGLAHADDDELAIQGIGISRDIDCQGKNVGVYGAENEIALTGQCRTITVHGSKHKVSFEQGQTLS VSGSDNTVNGGRAKDVVVSVAKNTVTTTLEAGDEPGTLKATGANNKITLVLSGPSRLDVGGVEQVVEWSKADGAPNPEVR SSGALNSIKRKK
Sequences:
>Translated_172_residues MLLRLPVITAAMLAVVGLAHADDDELAIQGIGISRDIDCQGKNVGVYGAENEIALTGQCRTITVHGSKHKVSFEQGQTLS VSGSDNTVNGGRAKDVVVSVAKNTVTTTLEAGDEPGTLKATGANNKITLVLSGPSRLDVGGVEQVVEWSKADGAPNPEVR SSGALNSIKRKK >Mature_172_residues MLLRLPVITAAMLAVVGLAHADDDELAIQGIGISRDIDCQGKNVGVYGAENEIALTGQCRTITVHGSKHKVSFEQGQTLS VSGSDNTVNGGRAKDVVVSVAKNTVTTTLEAGDEPGTLKATGANNKITLVLSGPSRLDVGGVEQVVEWSKADGAPNPEVR SSGALNSIKRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17802; Mature: 17802
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRLPVITAAMLAVVGLAHADDDELAIQGIGISRDIDCQGKNVGVYGAENEIALTGQCR CEEECHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCEE TITVHGSKHKVSFEQGQTLSVSGSDNTVNGGRAKDVVVSVAKNTVTTTLEAGDEPGTLKA EEEEECCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCEEEE TGANNKITLVLSGPSRLDVGGVEQVVEWSKADGAPNPEVRSSGALNSIKRKK ECCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MLLRLPVITAAMLAVVGLAHADDDELAIQGIGISRDIDCQGKNVGVYGAENEIALTGQCR CEEECHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCEE TITVHGSKHKVSFEQGQTLSVSGSDNTVNGGRAKDVVVSVAKNTVTTTLEAGDEPGTLKA EEEEECCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCEEEE TGANNKITLVLSGPSRLDVGGVEQVVEWSKADGAPNPEVRSSGALNSIKRKK ECCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA