Click here to switch to the map view.

The map label for this gene is yggT [C]

Identifier: 192288850

GI number: 192288850

Start: 450661

End: 450951

Strand: Reverse

Name: yggT [C]

Synonym: Rpal_0419

Alternate gene names: 192288850

Gene position: 450951-450661 (Counterclockwise)

Preceding gene: 192288851

Following gene: 192288849

Centisome position: 7.85

GC content: 58.76

Gene sequence:

>291_bases
ATGCGCGCCATTCTCGACATCGTTCTCATCATCCTCGATCTCTACATCTGGCTGCTGATCGCCTCGGCGATCCTGTCCTG
GCTGATCGCCTTCAACGTGGTGAACACGCGCAACCAGTTCGTCGGCGCGGTGTCCGAGTTCCTGTACCGAATCACCGAGC
CGCTGCTGGCGCCGATCCGCAATCTGCTGCCCTCGCTCGGCGGTCTCGACATCTCGCCGATCATCCTGATCCTTCTGATC
ATGTTCCTGCAGCGGGTGATCACCTATTACATCTACCCGGCGGTGTTCTAA

Upstream 100 bases:

>100_bases
CCGCGGCTTTATTGCCGCCGAGTTCCCTTGTTTGGACGGGGGTGAACCGATATCTACGGCTCGAGCTTTCCGCGACCGAA
ACCGCGAGTTTTCCCCCGCC

Downstream 100 bases:

>100_bases
CCGCGCCGGAAAGGCGAGCGCCGGCATGGCGGAAGCTTGGCGGTATTCGGCTCAGGGCGTTGCGGTGGCGGTGCGGGTCA
CCCCGCGCGGCGGCCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MRAILDIVLIILDLYIWLLIASAILSWLIAFNVVNTRNQFVGAVSEFLYRITEPLLAPIRNLLPSLGGLDISPIILILLI
MFLQRVITYYIYPAVF

Sequences:

>Translated_96_residues
MRAILDIVLIILDLYIWLLIASAILSWLIAFNVVNTRNQFVGAVSEFLYRITEPLLAPIRNLLPSLGGLDISPIILILLI
MFLQRVITYYIYPAVF
>Mature_96_residues
MRAILDIVLIILDLYIWLLIASAILSWLIAFNVVNTRNQFVGAVSEFLYRITEPLLAPIRNLLPSLGGLDISPIILILLI
MFLQRVITYYIYPAVF

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 10963; Mature: 10963

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAILDIVLIILDLYIWLLIASAILSWLIAFNVVNTRNQFVGAVSEFLYRITEPLLAPIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLPSLGGLDISPIILILLIMFLQRVITYYIYPAVF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRAILDIVLIILDLYIWLLIASAILSWLIAFNVVNTRNQFVGAVSEFLYRITEPLLAPIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLPSLGGLDISPIILILLIMFLQRVITYYIYPAVF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]