| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is phhB
Identifier: 192288839
GI number: 192288839
Start: 436761
End: 437063
Strand: Reverse
Name: phhB
Synonym: Rpal_0408
Alternate gene names: NA
Gene position: 437063-436761 (Counterclockwise)
Preceding gene: 192288841
Following gene: 192288838
Centisome position: 7.61
GC content: 62.71
Gene sequence:
>303_bases ATGAATAGATTATCGGCGTCGGAACGGCAGGCGGCTCTTCGAGAACTCCCCGGCTGGCTGGAACTCGAGGAGCGCGAGGC AATCGGCCGCAGCTATCAATTCACGGATTTCAGCGAGGCATTCGGCTTTATGACGCGCGTCGCGCTCGCCGCCGAGAAGG CCGACCATCATCCGGAATGGCGCAACGTTTACAGGACGGTTGACGTTGTGCTGACGACGCACGACGCCGGCGGCGTCACC GAACGCGATGTGAAACTGGCGAAGGCGATGGACGCGATCGCGGAACGCTGCGGCGCGCGATGA
Upstream 100 bases:
>100_bases GAAGTTCCGGCTCCTGCTGCCTCGCTAGCTGACTGGTTTGGCTGCATTATGGTGGCGGCACGGCGGCCGCGATCGCCGGC CGGCAGCAGAGGAGAGAGGT
Downstream 100 bases:
>100_bases CGCGCCGCCTTGCGAGGACGCGGACCGATCACCAGATTCGGCGGGACCGCCAAAACGGGTTCGCGGCCGCTGGAGTACTT CAATGACGACTGATCACAGC
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MNRLSASERQAALRELPGWLELEEREAIGRSYQFTDFSEAFGFMTRVALAAEKADHHPEWRNVYRTVDVVLTTHDAGGVT ERDVKLAKAMDAIAERCGAR
Sequences:
>Translated_100_residues MNRLSASERQAALRELPGWLELEEREAIGRSYQFTDFSEAFGFMTRVALAAEKADHHPEWRNVYRTVDVVLTTHDAGGVT ERDVKLAKAMDAIAERCGAR >Mature_100_residues MNRLSASERQAALRELPGWLELEEREAIGRSYQFTDFSEAFGFMTRVALAAEKADHHPEWRNVYRTVDVVLTTHDAGGVT ERDVKLAKAMDAIAERCGAR
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI134133240, Length=95, Percent_Identity=53.6842105263158, Blast_Score=110, Evalue=4e-25, Organism=Homo sapiens, GI4557831, Length=95, Percent_Identity=54.7368421052632, Blast_Score=109, Evalue=6e-25, Organism=Caenorhabditis elegans, GI115533705, Length=98, Percent_Identity=53.0612244897959, Blast_Score=110, Evalue=1e-25, Organism=Drosophila melanogaster, GI45549100, Length=95, Percent_Identity=46.3157894736842, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 11295; Mature: 11295
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLSASERQAALRELPGWLELEEREAIGRSYQFTDFSEAFGFMTRVALAAEKADHHPEW CCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH RNVYRTVDVVLTTHDAGGVTERDVKLAKAMDAIAERCGAR HHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRLSASERQAALRELPGWLELEEREAIGRSYQFTDFSEAFGFMTRVALAAEKADHHPEW CCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH RNVYRTVDVVLTTHDAGGVTERDVKLAKAMDAIAERCGAR HHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA