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The map label for this gene is 192288841

Identifier: 192288841

GI number: 192288841

Start: 438655

End: 440100

Strand: Reverse

Name: 192288841

Synonym: Rpal_0410

Alternate gene names: NA

Gene position: 440100-438655 (Counterclockwise)

Preceding gene: 192288842

Following gene: 192288839

Centisome position: 7.66

GC content: 67.63

Gene sequence:

>1446_bases
ATGTCTAGCGTCGTCAGGCGCGCGAAGCGGTGGCTGTATCTCGGCCACCGTTGGCTCGGCATCGCCGGGTGTCTGCTGTT
CGCGATGTGGTTCATCTCCGGCGTGGTGATGATGTACGTCGCGTTTCCGCATTACGACAAAGAAGAACGCTGGGCGGCGT
TACCCGACCTCGCCTGGCAGCACGTGGCATTGTCACCCGACCAGGCGATGCAGGCGGCCGGCGTAACGCACTATCCGCGC
GACCTCCGGCTGGTGATGCTCGATACCGAGCCGGTTTACCGGCTGCTCGACTGGCGGGGTCAGCGTGCCACGGTGTCGGC
GATCGATGGCCGCAAGATCGAGCAGGTCAGCGCCGATCAGGCGCTGGGGATCGCGCGGCATCATCCGGCCGCCGCCGCGC
CGCAGCTGCTCGAGACGGTCGATCGAGACCAATGGAGCGTGACCTCGCGCTACGATTCGTTCAGGCCGCTGTACCTGATC
GGGCTCGGCGACACCGCCGGCACTGAGCTCTATGTCGCGTCCCGCGGCGGCGAGATCGTGCTCGACACTACGCGGCAAGA
GCGGATCTGGAATTGGCTCGGCGCGATCCCGCACTGGATCTACTTCACGGTGCTGCGCCAGGACGGGCCGCTGTGGCGGC
AGGTGGTGCTGTGGGTCTCGGGCATACTGATGATGGTCGCGGCGAGCGGCATCTGGATCGGACTCCTCCGCGCCGGCCTG
CGGCGGCGCTATGCGTCGGGCCGGATCACGCCGTATCGCGGCTGGATGGCCTGGCACCACATCACCGGCCTGATCGGCGG
CGTGGTCGTGCTGACCTGGATGTTCTCCGGCTGGCTGTCGATGAATCCCGGCGAGGCCTTCGCACGTCGCGGCGAGAGCC
GCGAGATGCTGCAGCGCTATGCCGGCCACGATGCTCCGACGATCGCAGCCAAGCTTCCCACCACGCTCCTGCCGGGTGTC
GTCGAAGCCCGCTTCGCCTGGATCGGCGGCACGCCACTGATCCTGCTGGGACACAGCGACGGCCGGCAGACTGTCGCCGA
TCCCGACGACGGCACCGCCAAACGGCTGCCGGAGGAAACGATCATCGCGGCGGCGACCCGGTTGCTCCCGGACGCCACGA
TGGTGCTGCGTCAGCGGCTCGAACGGTACGACGCCTATTGGTACCAGCACCATCGCCAGCGCGTGCTGCCGGTGCTGCGG
GTCGGGTTCGACGACCCGGCCTCGACGTGGTTTCACCTCGATCCCGCGACCGGTGAACTGCTCGGACGCAGCGATACCAG
CGCGCGTAGCTATCGCTGGCTGTTCAACGCGCCACACAGCTTCGACTTCCCGGTGCTGCTGGCCTACCGGCCGGCATGGG
ACCTGGTGGTGATCGTGCTGTCCCTCGCCGGCTTGGTGATCTCGGTCAGCGGCGTGGTGATCGGTTGGCGGCGGCTGGTG
CGCTGA

Upstream 100 bases:

>100_bases
TTGTTCGACACCGTCTACACGACATCGGGCAACACGACCATGTGGCAGCTCGGCATGCCGCGCACGGCGGAACTGTCCTA
CAACGTGAAGTTCTAAGGCG

Downstream 100 bases:

>100_bases
GCGCTACACCGCCTGCGGCCGTACGCCACGCAGCGGCGGCAGCGGCGACACATCGGCGAGCAGCAGTTTGCGGTCGGTGA
CGGCGTTGTGGAACTGCTCT

Product: PepSY-associated TM helix domain-containing protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix; Na+/Proline Symporter; PepSY-Associated TM Helix Family; Transmembrane Protein; Pepsy-Associated Tm Helix Domain Protein

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MSSVVRRAKRWLYLGHRWLGIAGCLLFAMWFISGVVMMYVAFPHYDKEERWAALPDLAWQHVALSPDQAMQAAGVTHYPR
DLRLVMLDTEPVYRLLDWRGQRATVSAIDGRKIEQVSADQALGIARHHPAAAAPQLLETVDRDQWSVTSRYDSFRPLYLI
GLGDTAGTELYVASRGGEIVLDTTRQERIWNWLGAIPHWIYFTVLRQDGPLWRQVVLWVSGILMMVAASGIWIGLLRAGL
RRRYASGRITPYRGWMAWHHITGLIGGVVVLTWMFSGWLSMNPGEAFARRGESREMLQRYAGHDAPTIAAKLPTTLLPGV
VEARFAWIGGTPLILLGHSDGRQTVADPDDGTAKRLPEETIIAAATRLLPDATMVLRQRLERYDAYWYQHHRQRVLPVLR
VGFDDPASTWFHLDPATGELLGRSDTSARSYRWLFNAPHSFDFPVLLAYRPAWDLVVIVLSLAGLVISVSGVVIGWRRLV
R

Sequences:

>Translated_481_residues
MSSVVRRAKRWLYLGHRWLGIAGCLLFAMWFISGVVMMYVAFPHYDKEERWAALPDLAWQHVALSPDQAMQAAGVTHYPR
DLRLVMLDTEPVYRLLDWRGQRATVSAIDGRKIEQVSADQALGIARHHPAAAAPQLLETVDRDQWSVTSRYDSFRPLYLI
GLGDTAGTELYVASRGGEIVLDTTRQERIWNWLGAIPHWIYFTVLRQDGPLWRQVVLWVSGILMMVAASGIWIGLLRAGL
RRRYASGRITPYRGWMAWHHITGLIGGVVVLTWMFSGWLSMNPGEAFARRGESREMLQRYAGHDAPTIAAKLPTTLLPGV
VEARFAWIGGTPLILLGHSDGRQTVADPDDGTAKRLPEETIIAAATRLLPDATMVLRQRLERYDAYWYQHHRQRVLPVLR
VGFDDPASTWFHLDPATGELLGRSDTSARSYRWLFNAPHSFDFPVLLAYRPAWDLVVIVLSLAGLVISVSGVVIGWRRLV
R
>Mature_480_residues
SSVVRRAKRWLYLGHRWLGIAGCLLFAMWFISGVVMMYVAFPHYDKEERWAALPDLAWQHVALSPDQAMQAAGVTHYPRD
LRLVMLDTEPVYRLLDWRGQRATVSAIDGRKIEQVSADQALGIARHHPAAAAPQLLETVDRDQWSVTSRYDSFRPLYLIG
LGDTAGTELYVASRGGEIVLDTTRQERIWNWLGAIPHWIYFTVLRQDGPLWRQVVLWVSGILMMVAASGIWIGLLRAGLR
RRYASGRITPYRGWMAWHHITGLIGGVVVLTWMFSGWLSMNPGEAFARRGESREMLQRYAGHDAPTIAAKLPTTLLPGVV
EARFAWIGGTPLILLGHSDGRQTVADPDDGTAKRLPEETIIAAATRLLPDATMVLRQRLERYDAYWYQHHRQRVLPVLRV
GFDDPASTWFHLDPATGELLGRSDTSARSYRWLFNAPHSFDFPVLLAYRPAWDLVVIVLSLAGLVISVSGVVIGWRRLVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54403; Mature: 54271

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVVRRAKRWLYLGHRWLGIAGCLLFAMWFISGVVMMYVAFPHYDKEERWAALPDLAWQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHH
HVALSPDQAMQAAGVTHYPRDLRLVMLDTEPVYRLLDWRGQRATVSAIDGRKIEQVSADQ
HEECCHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEECCCCHHHHHCHHH
ALGIARHHPAAAAPQLLETVDRDQWSVTSRYDSFRPLYLIGLGDTAGTELYVASRGGEIV
HHCHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCEEEEEECCCEEE
LDTTRQERIWNWLGAIPHWIYFTVLRQDGPLWRQVVLWVSGILMMVAASGIWIGLLRAGL
EECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRYASGRITPYRGWMAWHHITGLIGGVVVLTWMFSGWLSMNPGEAFARRGESREMLQRY
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHH
AGHDAPTIAAKLPTTLLPGVVEARFAWIGGTPLILLGHSDGRQTVADPDDGTAKRLPEET
CCCCCCCHHHHCCHHHCCHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCHHHHCCHHH
IIAAATRLLPDATMVLRQRLERYDAYWYQHHRQRVLPVLRVGFDDPASTWFHLDPATGEL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHH
LGRSDTSARSYRWLFNAPHSFDFPVLLAYRPAWDLVVIVLSLAGLVISVSGVVIGWRRLV
CCCCCCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure 
SSVVRRAKRWLYLGHRWLGIAGCLLFAMWFISGVVMMYVAFPHYDKEERWAALPDLAWQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHH
HVALSPDQAMQAAGVTHYPRDLRLVMLDTEPVYRLLDWRGQRATVSAIDGRKIEQVSADQ
HEECCHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEECCCCHHHHHCHHH
ALGIARHHPAAAAPQLLETVDRDQWSVTSRYDSFRPLYLIGLGDTAGTELYVASRGGEIV
HHCHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCEEEEEECCCEEE
LDTTRQERIWNWLGAIPHWIYFTVLRQDGPLWRQVVLWVSGILMMVAASGIWIGLLRAGL
EECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRYASGRITPYRGWMAWHHITGLIGGVVVLTWMFSGWLSMNPGEAFARRGESREMLQRY
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHH
AGHDAPTIAAKLPTTLLPGVVEARFAWIGGTPLILLGHSDGRQTVADPDDGTAKRLPEET
CCCCCCCHHHHCCHHHCCHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCHHHHCCHHH
IIAAATRLLPDATMVLRQRLERYDAYWYQHHRQRVLPVLRVGFDDPASTWFHLDPATGEL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHH
LGRSDTSARSYRWLFNAPHSFDFPVLLAYRPAWDLVVIVLSLAGLVISVSGVVIGWRRLV
CCCCCCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA