Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192288780

Identifier: 192288780

GI number: 192288780

Start: 368431

End: 369174

Strand: Reverse

Name: 192288780

Synonym: Rpal_0349

Alternate gene names: NA

Gene position: 369174-368431 (Counterclockwise)

Preceding gene: 192288781

Following gene: 192288779

Centisome position: 6.43

GC content: 66.4

Gene sequence:

>744_bases
ATGCTCGACGCCGCCATCAAGGCGCTGACCCAGATTCTATCGCCGCCGATGCGCTCGATCCTGTGGCGCTCGGTCGGCTT
TGCGCTGGCCTTGATCGCGGTGGCGGCGATCGGATTGCAACGGCTGTTGAGCTGGGCGGCCACGTCAAGCGAGCTCTGGG
CCGAGGCGGCGCTGGGCGGCTTCCAGACCCCGCTGTATATCCTGTCCTGGGTGCTGTCGATCGCTGCCGGCCTCGGCATC
GTGGTCGGCGCTGTGTTCCTGATGCCGGCGGTGACCTCACTGGTCGCCGGCATCTTCGTCGACGAGGCGGCCGAGCACGT
CGAACGTGAATCCTATCCGCACGAAGCGCCGGGCGTCGCACTCCCGATCGGCCTTGCGACCTGGGAAACGGTGAAGACCG
CGCTGCTGACCATCCTGGTGTACCTAGTGGCGCTGCCGTTCCTGTTCGTCGCCGGCGCGGGCGCAATCGTGTTCTTCGTC
GCGACCGCGTGGCTGCTCGGCCGGGAATATTTCGAACTCGCCGCGATGCGTTTCCGCACCGCGCCGGAAGCCAAGGCGAT
GCGGCGCGACAACGCCACCACGGTGTTCATCGGCGGCCTGATCATCGCGGCTTTCGTGTCGATCCCGATCGTCAATCTGG
CGACGCCGCTGTTCGGCATGGCCTTCATGGTCCATCTGCACAAGCGGTTGTCAGGATCACGCCCCGAAGTGCTGGCGCCG
GATCAGCGCAGCATGCGGCGCTAG

Upstream 100 bases:

>100_bases
GCTGCAACGGTAGGCGCGCGCCGCAGACATCCCGGCCCTTGCCGAACATCGGCGCGGTCTCTACCTGTTCGAGGCTGTTT
TTCGGGACGAGGACGCCGCC

Downstream 100 bases:

>100_bases
GCCGCGTCAGACGTGCGCCCGGTGTCAGTCGTTTCGCGGAGCGCCGCGCAGCTTGCGGCGAACTACGGACGACACCTCCT
GCACGGCACCGCCGACGATC

Product: CysZ-like protein

Products: NA

Alternate protein names: Carbamoyl-Phosphate Synthase Large Chain; CysZ Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLDAAIKALTQILSPPMRSILWRSVGFALALIAVAAIGLQRLLSWAATSSELWAEAALGGFQTPLYILSWVLSIAAGLGI
VVGAVFLMPAVTSLVAGIFVDEAAEHVERESYPHEAPGVALPIGLATWETVKTALLTILVYLVALPFLFVAGAGAIVFFV
ATAWLLGREYFELAAMRFRTAPEAKAMRRDNATTVFIGGLIIAAFVSIPIVNLATPLFGMAFMVHLHKRLSGSRPEVLAP
DQRSMRR

Sequences:

>Translated_247_residues
MLDAAIKALTQILSPPMRSILWRSVGFALALIAVAAIGLQRLLSWAATSSELWAEAALGGFQTPLYILSWVLSIAAGLGI
VVGAVFLMPAVTSLVAGIFVDEAAEHVERESYPHEAPGVALPIGLATWETVKTALLTILVYLVALPFLFVAGAGAIVFFV
ATAWLLGREYFELAAMRFRTAPEAKAMRRDNATTVFIGGLIIAAFVSIPIVNLATPLFGMAFMVHLHKRLSGSRPEVLAP
DQRSMRR
>Mature_247_residues
MLDAAIKALTQILSPPMRSILWRSVGFALALIAVAAIGLQRLLSWAATSSELWAEAALGGFQTPLYILSWVLSIAAGLGI
VVGAVFLMPAVTSLVAGIFVDEAAEHVERESYPHEAPGVALPIGLATWETVKTALLTILVYLVALPFLFVAGAGAIVFFV
ATAWLLGREYFELAAMRFRTAPEAKAMRRDNATTVFIGGLIIAAFVSIPIVNLATPLFGMAFMVHLHKRLSGSRPEVLAP
DQRSMRR

Specific function: Unknown

COG id: COG2981

COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26529; Mature: 26529

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHCC
>Mature Secondary Structure
MLDAAIKALTQILSPPMRSILWRSVGFALALIAVAAIGLQRLLSWAATSSELWAEAALGG
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FQTPLYILSWVLSIAAGLGIVVGAVFLMPAVTSLVAGIFVDEAAEHVERESYPHEAPGVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
LPIGLATWETVKTALLTILVYLVALPFLFVAGAGAIVFFVATAWLLGREYFELAAMRFRT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APEAKAMRRDNATTVFIGGLIIAAFVSIPIVNLATPLFGMAFMVHLHKRLSGSRPEVLAP
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DQRSMRR
CHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA