| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288704
Identifier: 192288704
GI number: 192288704
Start: 292654
End: 293487
Strand: Reverse
Name: 192288704
Synonym: Rpal_0273
Alternate gene names: NA
Gene position: 293487-292654 (Counterclockwise)
Preceding gene: 192288716
Following gene: 192288702
Centisome position: 5.11
GC content: 66.55
Gene sequence:
>834_bases ATGCTGCAACGACTCGTGAAAGCGACCAATCAATGGATGCCCACCGCCATGGCGTTCCATTGCTGCCGGATACTCGCATC GCGCCCGCCGCGGGCCGAGGTCTCCGCGGCGGAGCAGGCCGCCCTGGCACAGGCGAGCCGGCTTTTCGAGCTGGATTGGA GCAACGACGCCGCCTGGAGCTGGGGCTCCGGTCCAACGGTGGTGCTGATCCATGGTTGGGGTGGGCGCGCCGCCCAGATG GCGCCCCTCGCGGTCGAGCTCGCGCGATCCGGACTGCGGGCGGTGGCGTTCGATGTCGCAGGGCACGGCGAATCGGCCGA GCCGTCGGCAGGTTGGGAGTACTCCATTCGCGACATCGCCAAGGTTTCTCGTCAGCTTGGCTCCGTCGCCGGCTATGTTG GCCACTCGGCCGGCGGGCTGTCGTTGATGGCAGCGCGGCGCATCCATGGCCTGTCACCGGCCAAATACGTCTGTGTTTGC GCGCCGTCACATCCGTATCCCCCGGTGCGGGGCTTGGCGCAGCGGCTCGATCCGCGGCCCAGTGTGCTGCAGCGGTACCG AACTTATCTCGGTGCGCAATTCCAGACCGATTGGCGATCGTTAGAAGCAGGCGCAGCGTATCTGGGCGCCGGGGACGATC TGCTGCTCTGCTACGATCGCAAGGATCGCTTCGTCGATCCTGACGATGGCAACCGCATCCATGCGCTGTGTCCCGGCTCA CGGCTGCTGACGAGCGACGCCTACGGCCACACCCGCATTCTGCGCGCCACCGAGGTGATGCGCGAGATCGCCAAATTCCT GAACGACGAGGCCAGTCGTATCGCCGCGGCCTGA
Upstream 100 bases:
>100_bases TTTCCGTGGCATCTGTCGTTTCTCCTGGCGCGACCTCTCTATGTTGACTGGTCTATTTGGGGACGTCAATCAGCTCTGGA CACTCATACGGAGGCCCAAG
Downstream 100 bases:
>100_bases GGTCCGATTGAATGCGCGACCGCCTCGCCCCATTCAGGGTTTGGACGTGTCGCGGCGTTCGCGCACCGAGCCCTCTTGGG CGACGGAGGCCACCAGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MLQRLVKATNQWMPTAMAFHCCRILASRPPRAEVSAAEQAALAQASRLFELDWSNDAAWSWGSGPTVVLIHGWGGRAAQM APLAVELARSGLRAVAFDVAGHGESAEPSAGWEYSIRDIAKVSRQLGSVAGYVGHSAGGLSLMAARRIHGLSPAKYVCVC APSHPYPPVRGLAQRLDPRPSVLQRYRTYLGAQFQTDWRSLEAGAAYLGAGDDLLLCYDRKDRFVDPDDGNRIHALCPGS RLLTSDAYGHTRILRATEVMREIAKFLNDEASRIAAA
Sequences:
>Translated_277_residues MLQRLVKATNQWMPTAMAFHCCRILASRPPRAEVSAAEQAALAQASRLFELDWSNDAAWSWGSGPTVVLIHGWGGRAAQM APLAVELARSGLRAVAFDVAGHGESAEPSAGWEYSIRDIAKVSRQLGSVAGYVGHSAGGLSLMAARRIHGLSPAKYVCVC APSHPYPPVRGLAQRLDPRPSVLQRYRTYLGAQFQTDWRSLEAGAAYLGAGDDLLLCYDRKDRFVDPDDGNRIHALCPGS RLLTSDAYGHTRILRATEVMREIAKFLNDEASRIAAA >Mature_277_residues MLQRLVKATNQWMPTAMAFHCCRILASRPPRAEVSAAEQAALAQASRLFELDWSNDAAWSWGSGPTVVLIHGWGGRAAQM APLAVELARSGLRAVAFDVAGHGESAEPSAGWEYSIRDIAKVSRQLGSVAGYVGHSAGGLSLMAARRIHGLSPAKYVCVC APSHPYPPVRGLAQRLDPRPSVLQRYRTYLGAQFQTDWRSLEAGAAYLGAGDDLLLCYDRKDRFVDPDDGNRIHALCPGS RLLTSDAYGHTRILRATEVMREIAKFLNDEASRIAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30070; Mature: 30070
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRLVKATNQWMPTAMAFHCCRILASRPPRAEVSAAEQAALAQASRLFELDWSNDAAWS CHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCEE WGSGPTVVLIHGWGGRAAQMAPLAVELARSGLRAVAFDVAGHGESAEPSAGWEYSIRDIA CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH KVSRQLGSVAGYVGHSAGGLSLMAARRIHGLSPAKYVCVCAPSHPYPPVRGLAQRLDPRP HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCH SVLQRYRTYLGAQFQTDWRSLEAGAAYLGAGDDLLLCYDRKDRFVDPDDGNRIHALCPGS HHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCC RLLTSDAYGHTRILRATEVMREIAKFLNDEASRIAAA EEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure MLQRLVKATNQWMPTAMAFHCCRILASRPPRAEVSAAEQAALAQASRLFELDWSNDAAWS CHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCEE WGSGPTVVLIHGWGGRAAQMAPLAVELARSGLRAVAFDVAGHGESAEPSAGWEYSIRDIA CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH KVSRQLGSVAGYVGHSAGGLSLMAARRIHGLSPAKYVCVCAPSHPYPPVRGLAQRLDPRP HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCH SVLQRYRTYLGAQFQTDWRSLEAGAAYLGAGDDLLLCYDRKDRFVDPDDGNRIHALCPGS HHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCC RLLTSDAYGHTRILRATEVMREIAKFLNDEASRIAAA EEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA