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The map label for this gene is visC [C]

Identifier: 192288702

GI number: 192288702

Start: 290285

End: 291505

Strand: Reverse

Name: visC [C]

Synonym: Rpal_0271

Alternate gene names: 192288702

Gene position: 291505-290285 (Counterclockwise)

Preceding gene: 192288704

Following gene: 192288698

Centisome position: 5.07

GC content: 69.37

Gene sequence:

>1221_bases
ATGACGGCACCGCGAAGCATTGTGATTGGGGGCGGGGCGTTCGCCGGTTTGGCGCTGGCGCTGGCGTTGCGCCAGGGGCT
CGGCCCCGAGGTGCCGGTGATCGTCGCCGATCCGGCGCTCGCGCTGCGACCGAGCCGCGACCCGCGCGCCACCGCGATCG
TCGCGGCGTGCCGGCGGTTGTTCGAGGCGCTCGGGGTCTGGGACGAGGTGGCGCCGACCGCGCAGCCGATCATCGACATG
ATCGTCACCGACAGCCATCTTGAAGACGCGACGCGGCCGGTATTCCTGACCTTCGCGGGCGAAGTGCAGCCCGGCGAGCC
GTTCGCCCACATGGTCGAAAACAGATATCTGGTCGAGGCGCTGGCCAAACGCGCCGAGGCCGAAGGCGTCGAGCTGCGCG
CCACCCCGGTCACCTCCTACGACGCGCGCACCGAAGCGATCGGCGTCACGCTCGGCGACGGCAGCGTGATCGACGCCAGC
CTGCTGGTGGCGGCCGACGGCGCCAAGTCGAAACTGCGCCAGCGTGCCGGTATCGCCACCTATGGCTGGGATTACGACCA
GTCGGGCATCGTCGTCACGGTCGAGCACGAGCGCGACCACAATGGCTGCGCCGAAGAACACTTCCTGCCCGCTGGTCCGT
TCGCGATCCTGCCGCTCACCGGCCGGCGCTCGTCGCTGGTGTGGAGCGAGAGCCGCCGCGATGCCGAGCGGATCGTCGCG
CTGCCGGAGAAGGAATTCCAGCGCGAGTTGGAGAAGCGGTTCGGGCTGCGGCTCGGCGACGTCAAGCCGCTCGACAAGCC
GAAGTCGTTTCCGCTCGGCTATTTCGTCGCGCAGTCGTTCATCGCGCCGCGGCTCGCACTGATCGGCGACGCTGCGCACG
TGATCCATCCGATCGCCGGGCAGGGCCTCAATATGGGCCTGCGCGACGTCGCGGCTCTGGCCGAGGTGGTGGTCGATGCG
GCGCGGCTCGGAATCGATCCCGGTCAGGTCGACGTGTTGGAGGGCTATCAGCGCTGGCGGCGGTTCGACACCATGGCGAT
GGGCGTCGCCACCAACGGGCTCAACTTCCTGTTCTCCAACAACTCGCCGCTGCTGCGCGGGATTCGCGACATCGGCCTCG
GTCTGGTCGACCGCCTGCCGCCGCTGAAGGGTGCCTTCATCCGCCAGGCCGCCGGCCTCACCGGCGAGACGCCGCGGCTG
CTGAAGGGCGAAGCGCTGTAA

Upstream 100 bases:

>100_bases
GTCTGTTAGAAACCGCCCCGGCAACAGCGGGTTGGTCCTTGAAACCTGTTTCGCCCAGCTCCGATCCGGGCGCAAGGATC
ATGGCGCGAGAGTGAGAAAT

Downstream 100 bases:

>100_bases
GGCAGGGTGGAAGCGGATCGACCCGCCGTCTCCGCCGCCGCGGAAAGCAATCAGCTTTTCACCGAATAGCAGCGCGCTCG
CTCTCTCGCCTAAGGGAGAG

Product: 2-octaprenyl-6-methoxyphenyl hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MTAPRSIVIGGGAFAGLALALALRQGLGPEVPVIVADPALALRPSRDPRATAIVAACRRLFEALGVWDEVAPTAQPIIDM
IVTDSHLEDATRPVFLTFAGEVQPGEPFAHMVENRYLVEALAKRAEAEGVELRATPVTSYDARTEAIGVTLGDGSVIDAS
LLVAADGAKSKLRQRAGIATYGWDYDQSGIVVTVEHERDHNGCAEEHFLPAGPFAILPLTGRRSSLVWSESRRDAERIVA
LPEKEFQRELEKRFGLRLGDVKPLDKPKSFPLGYFVAQSFIAPRLALIGDAAHVIHPIAGQGLNMGLRDVAALAEVVVDA
ARLGIDPGQVDVLEGYQRWRRFDTMAMGVATNGLNFLFSNNSPLLRGIRDIGLGLVDRLPPLKGAFIRQAAGLTGETPRL
LKGEAL

Sequences:

>Translated_406_residues
MTAPRSIVIGGGAFAGLALALALRQGLGPEVPVIVADPALALRPSRDPRATAIVAACRRLFEALGVWDEVAPTAQPIIDM
IVTDSHLEDATRPVFLTFAGEVQPGEPFAHMVENRYLVEALAKRAEAEGVELRATPVTSYDARTEAIGVTLGDGSVIDAS
LLVAADGAKSKLRQRAGIATYGWDYDQSGIVVTVEHERDHNGCAEEHFLPAGPFAILPLTGRRSSLVWSESRRDAERIVA
LPEKEFQRELEKRFGLRLGDVKPLDKPKSFPLGYFVAQSFIAPRLALIGDAAHVIHPIAGQGLNMGLRDVAALAEVVVDA
ARLGIDPGQVDVLEGYQRWRRFDTMAMGVATNGLNFLFSNNSPLLRGIRDIGLGLVDRLPPLKGAFIRQAAGLTGETPRL
LKGEAL
>Mature_405_residues
TAPRSIVIGGGAFAGLALALALRQGLGPEVPVIVADPALALRPSRDPRATAIVAACRRLFEALGVWDEVAPTAQPIIDMI
VTDSHLEDATRPVFLTFAGEVQPGEPFAHMVENRYLVEALAKRAEAEGVELRATPVTSYDARTEAIGVTLGDGSVIDASL
LVAADGAKSKLRQRAGIATYGWDYDQSGIVVTVEHERDHNGCAEEHFLPAGPFAILPLTGRRSSLVWSESRRDAERIVAL
PEKEFQRELEKRFGLRLGDVKPLDKPKSFPLGYFVAQSFIAPRLALIGDAAHVIHPIAGQGLNMGLRDVAALAEVVVDAA
RLGIDPGQVDVLEGYQRWRRFDTMAMGVATNGLNFLFSNNSPLLRGIRDIGLGLVDRLPPLKGAFIRQAAGLTGETPRLL
KGEAL

Specific function: Not Yet Known. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=389, Percent_Identity=31.8766066838046, Blast_Score=171, Evalue=9e-43,
Organism=Homo sapiens, GI32967307, Length=321, Percent_Identity=35.5140186915888, Blast_Score=168, Evalue=8e-42,
Organism=Escherichia coli, GI1789273, Length=405, Percent_Identity=37.037037037037, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1786883, Length=395, Percent_Identity=38.4810126582278, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI1789274, Length=393, Percent_Identity=34.0966921119593, Blast_Score=186, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI25146631, Length=431, Percent_Identity=29.2343387470998, Blast_Score=159, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6321694, Length=294, Percent_Identity=30.2721088435374, Blast_Score=106, Evalue=8e-24,
Organism=Drosophila melanogaster, GI19920760, Length=384, Percent_Identity=30.46875, Blast_Score=162, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.14.13.-

Molecular weight: Translated: 43637; Mature: 43505

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPRSIVIGGGAFAGLALALALRQGLGPEVPVIVADPALALRPSRDPRATAIVAACRRL
CCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHH
FEALGVWDEVAPTAQPIIDMIVTDSHLEDATRPVFLTFAGEVQPGEPFAHMVENRYLVEA
HHHHCCHHHHCCCHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LAKRAEAEGVELRATPVTSYDARTEAIGVTLGDGSVIDASLLVAADGAKSKLRQRAGIAT
HHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCHHHHHHHHCCCEE
YGWDYDQSGIVVTVEHERDHNGCAEEHFLPAGPFAILPLTGRRSSLVWSESRRDAERIVA
ECCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCEEEEEECCCCCCCEECHHHHHHHHHEE
LPEKEFQRELEKRFGLRLGDVKPLDKPKSFPLGYFVAQSFIAPRLALIGDAAHVIHPIAG
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
QGLNMGLRDVAALAEVVVDAARLGIDPGQVDVLEGYQRWRRFDTMAMGVATNGLNFLFSN
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
NSPLLRGIRDIGLGLVDRLPPLKGAFIRQAAGLTGETPRLLKGEAL
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAPRSIVIGGGAFAGLALALALRQGLGPEVPVIVADPALALRPSRDPRATAIVAACRRL
CCCCEEEEECHHHHHHHHHHHHHHCCCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHH
FEALGVWDEVAPTAQPIIDMIVTDSHLEDATRPVFLTFAGEVQPGEPFAHMVENRYLVEA
HHHHCCHHHHCCCHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LAKRAEAEGVELRATPVTSYDARTEAIGVTLGDGSVIDASLLVAADGAKSKLRQRAGIAT
HHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCHHHHHHHHCCCEE
YGWDYDQSGIVVTVEHERDHNGCAEEHFLPAGPFAILPLTGRRSSLVWSESRRDAERIVA
ECCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCEEEEEECCCCCCCEECHHHHHHHHHEE
LPEKEFQRELEKRFGLRLGDVKPLDKPKSFPLGYFVAQSFIAPRLALIGDAAHVIHPIAG
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
QGLNMGLRDVAALAEVVVDAARLGIDPGQVDVLEGYQRWRRFDTMAMGVATNGLNFLFSN
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
NSPLLRGIRDIGLGLVDRLPPLKGAFIRQAAGLTGETPRLLKGEAL
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]