Click here to switch to the map view.

The map label for this gene is rlp2 [H]

Identifier: 192288694

GI number: 192288694

Start: 281011

End: 282309

Strand: Reverse

Name: rlp2 [H]

Synonym: Rpal_0263

Alternate gene names: 192288694

Gene position: 282309-281011 (Counterclockwise)

Preceding gene: 192288695

Following gene: 192288691

Centisome position: 4.91

GC content: 66.82

Gene sequence:

>1299_bases
ATGACGCCGGACGACATCGCAGGCTTCTACGCCAAGCGCGCAGATCTCGACCTCGACAATTACATCGAGCTGGATTTCGA
TTTCGAATGCGCCGGCGATCCGCGCGAAGCGGCGGCGCATCTGTGCAGCGAACAGTCGACGGCGCAGTGGCGGCGGGTCG
GCTTCGACGAAGACTTTCGTCCGCGCTTCGCCGCCAAGGTGTTGGAGCTGTCGGCGGAGCCGCGCCCTTCGGGATTCAGC
GTTCCGGTCGAGTGCGCCGCGCGCGGCGAGGTGCATGCCTGCCGCGTCACCATCGCGCATCCGCACGGCAATTTCGGCGC
GAAGATTCCGAACTTGCTGTCGGCCGTCTGCGGCGAGGGCGTGTTCTTCTCGCCCGGCATCCCGCTGATCCGGCTGCAGG
ACATTCGGTTTCCAGAGCCGTATCTCGCCGCGTTCGACGGCCCGCGCTTTGGCATCGCAGGCGTGCGCGAGCGGCTTCAG
GCGTTCGATCGCCCGATCTTCTTCGGGGTGATCAAGCCGAACATCGGCCTGCCGCCGCAGCCGTTCGCCGAGCTCGGCTA
TCAGAGCTGGACCGGTGGCCTCGACATCGCCAAGGACGACGAGATGCTGGCGGATGTCGATTGGTGTCCGCTGGCCGAGC
GCGCCGCGCTGCTCGGCGATGCCTGCCGTCGTGCCTCAGCGGAAACTGGCGTACCGAAGATCTATCTCGCCAATATCACC
GACGAGGTCGACCGGCTGACCGAGCTGCACGACGTCGCTGTCGTCAATGGGGCCGGCGCGCTGTTGATCAATGCGATGCC
GGTTGGGCTGTCCGCGGTGCGGATGCTGCGCAAGCACGCCACCGTTCCGCTGATCGCACACTTCCCCTTTATCGCCGCGT
TCAGCCGGCTAGCGAATTACGGCATCCATTCGCGGGTGATGACGCGGCTGCAGCGATTGGCGGGCTTCGATGTCGTGATC
ATGCCGGGCTTCGGTCCGCGGATGATGACGCCGGAACACGAGGTGCTCGACTGCATCCGCGCCTGCCTGGAGCCGATGGG
GTCGATCAAGCCGTGTCTGCCGGTGCCGGGCGGCAGCGACTCCGCGGCGACGCTGGAGAATGTGTATCGCAAGGTCGGCA
GCGCCGATTTCGGCTTCGTGCCCGGCCGCGGCGTGTTCGGTCATCCGATGGGGCCGGCCGCTGGCGCGACTTCGATCCGG
CAGGCCTGGGACGCGATTGCCGCGGGCATCCCGGTGGCCGATCACGCCGCCAGCCATCCTGAGTTGGCGGCAGCGCTGAA
AGCTTTCGGCGGGCGCTGA

Upstream 100 bases:

>100_bases
GCGCGACCGCTCCTCCACCGAAAGAACGGGGTGCTACGGATGGATACGCGGGCTGCGTCCGCGTAAGACCGCAGCGGTAT
CACCAAACAGGTCATCAGCC

Downstream 100 bases:

>100_bases
TCGGCACCCGCCGCGATTGCGGGCGCCTTAGCGCGGTAGTTCGGTGAAGGTGACGATCACGGCGCTGCGCCGCCCCTGGC
TCGGCACGCCGTCGCGGTGA

Product: RuBisCO-like protein

Products: 3-phospho-D-glycerate; H+

Alternate protein names: RuBisCO-like protein [H]

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFS
VPVECAARGEVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQ
AFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANIT
DEVDRLTELHDVAVVNGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVI
MPGFGPRMMTPEHEVLDCIRACLEPMGSIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIR
QAWDAIAAGIPVADHAASHPELAAALKAFGGR

Sequences:

>Translated_432_residues
MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFS
VPVECAARGEVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQ
AFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANIT
DEVDRLTELHDVAVVNGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVI
MPGFGPRMMTPEHEVLDCIRACLEPMGSIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIR
QAWDAIAAGIPVADHAASHPELAAALKAFGGR
>Mature_431_residues
TPDDIAGFYAKRADLDLDNYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSAEPRPSGFSV
PVECAARGEVHACRVTIAHPHGNFGAKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQA
FDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANITD
EVDRLTELHDVAVVNGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANYGIHSRVMTRLQRLAGFDVVIM
PGFGPRMMTPEHEVLDCIRACLEPMGSIKPCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQ
AWDAIAAGIPVADHAASHPELAAALKAFGGR

Specific function: May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity [H]

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type IV subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000685
- InterPro:   IPR017443 [H]

Pfam domain/function: PF00016 RuBisCO_large [H]

EC number: 4.1.1.39

Molecular weight: Translated: 46480; Mature: 46349

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDDIAGFYAKRADLDLDNYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGFDEDFR
CCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCCCCC
PRFAAKVLELSAEPRPSGFSVPVECAARGEVHACRVTIAHPHGNFGAKIPNLLSAVCGEG
HHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCC
VFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQ
EEECCCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC
PFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANIT
HHHHCCCHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCH
DEVDRLTELHDVAVVNGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANY
HHHHHHHHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
GIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGSIKPCLPVPGGSD
CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDAIAAGIPVADHAASHP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCH
ELAAALKAFGGR
HHHHHHHHHCCC
>Mature Secondary Structure 
TPDDIAGFYAKRADLDLDNYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGFDEDFR
CCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCCCCC
PRFAAKVLELSAEPRPSGFSVPVECAARGEVHACRVTIAHPHGNFGAKIPNLLSAVCGEG
HHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCC
VFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQ
EEECCCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC
PFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANIT
HHHHCCCHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCH
DEVDRLTELHDVAVVNGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANY
HHHHHHHHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
GIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGSIKPCLPVPGGSD
CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDAIAAGIPVADHAASHP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCH
ELAAALKAFGGR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-ribulose 1,5-bisphosphate; CO2; H2O

Specific reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA