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The map label for this gene is 192288691

Identifier: 192288691

GI number: 192288691

Start: 277309

End: 278091

Strand: Reverse

Name: 192288691

Synonym: Rpal_0260

Alternate gene names: NA

Gene position: 278091-277309 (Counterclockwise)

Preceding gene: 192288694

Following gene: 192288687

Centisome position: 4.84

GC content: 64.11

Gene sequence:

>783_bases
ATGCAATTCGATCTGTCCAACCGAAACCTAGCCCAGAAGATCTCGATCCTCGTCTTGGGAATTACGCTGTTCGCCTCGGT
CGCCATCGGTGGCGTCGGCGAAATGGTCTTGCATAAGGTCACCGATAGCCATGCCAAGCAGGCTGCGAGCGTCGCGTCGC
TCGACCGCTTGGTCGGCCAAGGGGGAGCGACGCTGTCGCCAGTCCGCGCCGCGGACGGCAGCATCGTCGGCATGCTGGTG
ATGCAGCAGGATGCCGGGCCGGTGGTGATGCCGGCGTCGTACGAAGGTCAGGGTCTGGTGGTTCAGGCGTCCGAGACGGT
GGTCACCTCGACTCCGGATTACGGCGTCGGCGCTGCTCGCACCATGCTGCTGCTCGCCGGTGTCGTGGTGTTCGCGGTGG
TCGGTCTGGTCGGTACCCGGATTTCGCGCGGCCTGCTCGCCCCGCTCGGCGAACTGGAGAAGGACGTCGAGCGCCTCGCC
TCTGGCGACACGAGCGTTCGCATTCATGCGCTGAGCCGCTCGGATGAAATCGGCCGGATCGCGCGGTCGATCGCCAAGAT
TCAGCAGTCGCTGATCGAACTGGCGAAGCTGAAGAGCCATCGGGTCCTCGACGGCACCAACGGCATTCTGTCCAATCTCA
AGGAAATGTGGATGGATCTGAAGGGGGCGGTCAGCAATGCCCGCGAGATGCTGTTCACGGACGGACGGACGGTCAGCGAG
ACGCTGTCGCGGTCGTGGAGCAGCTGGCTGCACAACGGTTTGGGCGTTCCGAAGCGCGCCTGA

Upstream 100 bases:

>100_bases
GGGAGTTAGCGAATCGTTAACGTTAATAAGTAAAGCGTTGTTCACGCTGTTCACCTTAGGGGGCAAGCCGCCCCTAATTG
AAGAAAGCTGGAGAACTACG

Downstream 100 bases:

>100_bases
TCGGCGCCTCGTTCCGCGACCCTGAACGCGCCTCCTGGAGTCATTGAAGGCGCGACGATCAAAACCAAGCGTTGAGATCA
TCACATCGAGGCTCACCCGG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Histidine Kinase; Histidine Kinase HAMP Region Domain-Containing Protein

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MQFDLSNRNLAQKISILVLGITLFASVAIGGVGEMVLHKVTDSHAKQAASVASLDRLVGQGGATLSPVRAADGSIVGMLV
MQQDAGPVVMPASYEGQGLVVQASETVVTSTPDYGVGAARTMLLLAGVVVFAVVGLVGTRISRGLLAPLGELEKDVERLA
SGDTSVRIHALSRSDEIGRIARSIAKIQQSLIELAKLKSHRVLDGTNGILSNLKEMWMDLKGAVSNAREMLFTDGRTVSE
TLSRSWSSWLHNGLGVPKRA

Sequences:

>Translated_260_residues
MQFDLSNRNLAQKISILVLGITLFASVAIGGVGEMVLHKVTDSHAKQAASVASLDRLVGQGGATLSPVRAADGSIVGMLV
MQQDAGPVVMPASYEGQGLVVQASETVVTSTPDYGVGAARTMLLLAGVVVFAVVGLVGTRISRGLLAPLGELEKDVERLA
SGDTSVRIHALSRSDEIGRIARSIAKIQQSLIELAKLKSHRVLDGTNGILSNLKEMWMDLKGAVSNAREMLFTDGRTVSE
TLSRSWSSWLHNGLGVPKRA
>Mature_260_residues
MQFDLSNRNLAQKISILVLGITLFASVAIGGVGEMVLHKVTDSHAKQAASVASLDRLVGQGGATLSPVRAADGSIVGMLV
MQQDAGPVVMPASYEGQGLVVQASETVVTSTPDYGVGAARTMLLLAGVVVFAVVGLVGTRISRGLLAPLGELEKDVERLA
SGDTSVRIHALSRSDEIGRIARSIAKIQQSLIELAKLKSHRVLDGTNGILSNLKEMWMDLKGAVSNAREMLFTDGRTVSE
TLSRSWSSWLHNGLGVPKRA

Specific function: Unknown

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27423; Mature: 27423

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFDLSNRNLAQKISILVLGITLFASVAIGGVGEMVLHKVTDSHAKQAASVASLDRLVGQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGATLSPVRAADGSIVGMLVMQQDAGPVVMPASYEGQGLVVQASETVVTSTPDYGVGAAR
CCCCCCCHHHCCCCEEEEEEEECCCCCEEECCCCCCCEEEEEECCEEEECCCCCCCHHHH
TMLLLAGVVVFAVVGLVGTRISRGLLAPLGELEKDVERLASGDTSVRIHALSRSDEIGRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHH
ARSIAKIQQSLIELAKLKSHRVLDGTNGILSNLKEMWMDLKGAVSNAREMLFTDGRTVSE
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TLSRSWSSWLHNGLGVPKRA
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQFDLSNRNLAQKISILVLGITLFASVAIGGVGEMVLHKVTDSHAKQAASVASLDRLVGQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGATLSPVRAADGSIVGMLVMQQDAGPVVMPASYEGQGLVVQASETVVTSTPDYGVGAAR
CCCCCCCHHHCCCCEEEEEEEECCCCCEEECCCCCCCEEEEEECCEEEECCCCCCCHHHH
TMLLLAGVVVFAVVGLVGTRISRGLLAPLGELEKDVERLASGDTSVRIHALSRSDEIGRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHH
ARSIAKIQQSLIELAKLKSHRVLDGTNGILSNLKEMWMDLKGAVSNAREMLFTDGRTVSE
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TLSRSWSSWLHNGLGVPKRA
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA