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The map label for this gene is pal [C]

Identifier: 192288642

GI number: 192288642

Start: 230478

End: 231398

Strand: Reverse

Name: pal [C]

Synonym: Rpal_0211

Alternate gene names: 192288642

Gene position: 231398-230478 (Counterclockwise)

Preceding gene: 192288644

Following gene: 192288638

Centisome position: 4.03

GC content: 66.99

Gene sequence:

>921_bases
ATGTCCGACTTCCGTGGCCAGCGCCGCGAGGTCAACGAGAACGGCCGCATCGTTATCACCGAGCCGGGCCGCATCATCGT
GCGCGACCCGAGCGGCCAGGAGTTCATCCGCCACAACGAGGTGGATCGCTTCCGCTACGGCGCGCGCGACATCCGTACCG
AGCAGATTCGCGGCGGTGGTACGCGCACGATCGTGGTGCGCCCCGATGGCACCGAGATCATCAACATCACCGGCGACGAC
GGCCAGCTGATGCGACGGATCCGCCGCGACCGGGACGGCCGCGAAATCATTATCATCGACAACAGCTACGGTCCGCGCGA
CCGGGCCAACTTCTACGTCGATCTGCCGCCGCCGGTGATCCGGATTCCCCGCGACCGCTACATCGTCGACTACGAGGACG
CTTCGCCGGAGCTGATCTACGAAACCCTGGAGGCGCCGCCGGTCGAACGGATCGAGCGTCGCTACACCATGGACGAGATC
CGCTACAGCCCGGCGGTGCGGCAGCGGATGCCGTCGATCGATCTCAACACCATCAACTTCGACCTGGGCTCGTGGGACAT
TCCCCCGGATCAGGCCGCGAAGCTGCAGGCGATTGCGGACGGTCTCAACCGGGCGATCCAGCGTAACCCGCGTGAGGTGT
TCCTGATCGAAGGCCACACCGACGCGGTCGGCAACGACACCGACAATCTGTCGCTGTCGGATCGTCGCGCCGAGGCGGCT
GCCGCACTGCTCACCCAGCAGTTCGGGGTGCCGGCCGAGAACCTGACCTCGCAGGGCTATGGCGAGCAGTATCTGAAGAT
CCAGACCCAGGCTCCGGAGCGTCAGAACCGCCGCGTCACCATCCGGCGCATCACGCCGCTGCTCAACGGCGGCCAGGCAG
CACTGCCGCCGCCTCCTCCGGGCGTGGCGCCGCCGCGCTGA

Upstream 100 bases:

>100_bases
TCCGCCGCCGGCCGTAACCGCGCCGATCCCGCCCGCGCCTCCGCCACCGCAGGCGCTGACCCCCATCGCTCCCGGCGCGC
AGGCGCCTGGACCGCGCAAC

Downstream 100 bases:

>100_bases
GCGGACGCGATCTCACGTAACAAAAAAGCCGCGGATCCGTCCGCGGCTTTTCCTTTTAGACCGCGCTGATGTCCTCAGCG
CATCACCACCACCTGAGTGC

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: OmpA/MotB; OmpA/MotB Domain Protein; Outer Membrane Protein OmpA/MotB Family; OmpA Family Protein; Outer Membrane Protein; OmpA Family Membrane Protein; Outer Membrane Protein OmpA Family

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSDFRGQRREVNENGRIVITEPGRIIVRDPSGQEFIRHNEVDRFRYGARDIRTEQIRGGGTRTIVVRPDGTEIINITGDD
GQLMRRIRRDRDGREIIIIDNSYGPRDRANFYVDLPPPVIRIPRDRYIVDYEDASPELIYETLEAPPVERIERRYTMDEI
RYSPAVRQRMPSIDLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAVGNDTDNLSLSDRRAEAA
AALLTQQFGVPAENLTSQGYGEQYLKIQTQAPERQNRRVTIRRITPLLNGGQAALPPPPPGVAPPR

Sequences:

>Translated_306_residues
MSDFRGQRREVNENGRIVITEPGRIIVRDPSGQEFIRHNEVDRFRYGARDIRTEQIRGGGTRTIVVRPDGTEIINITGDD
GQLMRRIRRDRDGREIIIIDNSYGPRDRANFYVDLPPPVIRIPRDRYIVDYEDASPELIYETLEAPPVERIERRYTMDEI
RYSPAVRQRMPSIDLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAVGNDTDNLSLSDRRAEAA
AALLTQQFGVPAENLTSQGYGEQYLKIQTQAPERQNRRVTIRRITPLLNGGQAALPPPPPGVAPPR
>Mature_305_residues
SDFRGQRREVNENGRIVITEPGRIIVRDPSGQEFIRHNEVDRFRYGARDIRTEQIRGGGTRTIVVRPDGTEIINITGDDG
QLMRRIRRDRDGREIIIIDNSYGPRDRANFYVDLPPPVIRIPRDRYIVDYEDASPELIYETLEAPPVERIERRYTMDEIR
YSPAVRQRMPSIDLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAVGNDTDNLSLSDRRAEAAA
ALLTQQFGVPAENLTSQGYGEQYLKIQTQAPERQNRRVTIRRITPLLNGGQAALPPPPPGVAPPR

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34782; Mature: 34650

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFRGQRREVNENGRIVITEPGRIIVRDPSGQEFIRHNEVDRFRYGARDIRTEQIRGGG
CCCCCCCHHHCCCCCCEEEECCCEEEEECCCCHHHHHHCCHHHHHCCCHHHHHHHHCCCC
TRTIVVRPDGTEIINITGDDGQLMRRIRRDRDGREIIIIDNSYGPRDRANFYVDLPPPVI
EEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCEE
RIPRDRYIVDYEDASPELIYETLEAPPVERIERRYTMDEIRYSPAVRQRMPSIDLNTINF
ECCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCHHHHHCCCHHHHHCCCCCCEEEEE
DLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAVGNDTDNLSLSDRRAEAA
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHH
AALLTQQFGVPAENLTSQGYGEQYLKIQTQAPERQNRRVTIRRITPLLNGGQAALPPPPP
HHHHHHHCCCCHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEECHHHCCCCCCCCCCCC
GVAPPR
CCCCCC
>Mature Secondary Structure 
SDFRGQRREVNENGRIVITEPGRIIVRDPSGQEFIRHNEVDRFRYGARDIRTEQIRGGG
CCCCCCHHHCCCCCCEEEECCCEEEEECCCCHHHHHHCCHHHHHCCCHHHHHHHHCCCC
TRTIVVRPDGTEIINITGDDGQLMRRIRRDRDGREIIIIDNSYGPRDRANFYVDLPPPVI
EEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCEE
RIPRDRYIVDYEDASPELIYETLEAPPVERIERRYTMDEIRYSPAVRQRMPSIDLNTINF
ECCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCHHHHHCCCHHHHHCCCCCCEEEEE
DLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFLIEGHTDAVGNDTDNLSLSDRRAEAA
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHH
AALLTQQFGVPAENLTSQGYGEQYLKIQTQAPERQNRRVTIRRITPLLNGGQAALPPPPP
HHHHHHHCCCCHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEECHHHCCCCCCCCCCCC
GVAPPR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA