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The map label for this gene is ftsY [H]

Identifier: 192288638

GI number: 192288638

Start: 225233

End: 226180

Strand: Reverse

Name: ftsY [H]

Synonym: Rpal_0207

Alternate gene names: 192288638

Gene position: 226180-225233 (Counterclockwise)

Preceding gene: 192288642

Following gene: 192288637

Centisome position: 3.94

GC content: 67.09

Gene sequence:

>948_bases
ATGAGCGACACTCCGGAAAATTCGAAACAGAGCTGGTGGCGACGGCTGTCCAGCGGACTGAAGCGCACCTCGAGCTCGAT
CGGGACCGCGCTGTCGGAATTCGTCTCCAAGCGCAAGCTCGATCGGGCGATGCTCGAGGAGATCGAGGACGTGCTGCTGC
GCGCCGATCTCGGCACCGAGGTGGCGGCGCGGATCGCCAAGGCGGTCGGCGAGGGCCGCTACGACAAGATGATCTCGGCC
AGCGACGTCAAAGAGATCGTGGCCGCGGAGGTCGAGAAGGTGCTGGCGCCGGTGGCGCAGCCGCTCGAGGTCGACGCCGG
CAACAAGCCGTTCGTGATCCTGATGGTCGGGGTCAACGGCTCCGGCAAGACCACCACCATCGGCAAATTGTCGGCCCGGT
TCGCCTCCGAGGGCCACAAGGTGATGCTGGCCGCCGGCGACACCTTCCGGGCTGCGGCGATCGATCAGCTCAAGGTCTGG
GGCGATCGCACCGGCACCCCGGTGGTCGCAGGCGCGCAGGGTTCGGACGCCGCAGGCCTCGCCTTCAACGCACTGACCGC
GGCCAAAGAGCAAGGCCGTGACGTGCTGCTGATCGATACCGCCGGTCGGCTGCAGAACCGCACAGAACTGATGAGCGAGC
TCGAAAAGGTGGTGCGGGTCATCAAGAAGGTCGACGCCACCGCGCCGCATGCGGTGCTGCTGGTGCTCGACGCCACTGTC
GGCCAGAACGCGCTGTCGCAGGTCGAGGCGTTCACCAAGACCGCCGGCGTCACCGGCCTGGTGATGACTAAGCTCGACGG
CACGGCGCGCGGCGGCATCCTGGTGGCGATCGCCGAAAAGCATAAGCTGCCGGTGCATTTCATCGGCGTCGGCGAGGGCG
TCGAGGATCTGGCGCCGTTCACCGCGCGCGATTTCGCCAAGGCGATCGCCGGCACGGAGGCGGCATGA

Upstream 100 bases:

>100_bases
CAGCACGCGGGCCTGGATCTCGTCGGGGGTCAGTTCCGGCGGCTCGAATTGATCTGGGTGGCTTTCGTTCATGGCGCGAA
ACGGCTAACACAGCGCCCTG

Downstream 100 bases:

>100_bases
CGGACGACCTGCTCAAGCCCAATCGGCCGCACCCGCTGTTCAAGCTGGCGACCGAGCTCGGGCCGCTGCTGGTGTTCTTC
ATCGTCAACGCCAAGTTTCA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSDTPENSKQSWWRRLSSGLKRTSSSIGTALSEFVSKRKLDRAMLEEIEDVLLRADLGTEVAARIAKAVGEGRYDKMISA
SDVKEIVAAEVEKVLAPVAQPLEVDAGNKPFVILMVGVNGSGKTTTIGKLSARFASEGHKVMLAAGDTFRAAAIDQLKVW
GDRTGTPVVAGAQGSDAAGLAFNALTAAKEQGRDVLLIDTAGRLQNRTELMSELEKVVRVIKKVDATAPHAVLLVLDATV
GQNALSQVEAFTKTAGVTGLVMTKLDGTARGGILVAIAEKHKLPVHFIGVGEGVEDLAPFTARDFAKAIAGTEAA

Sequences:

>Translated_315_residues
MSDTPENSKQSWWRRLSSGLKRTSSSIGTALSEFVSKRKLDRAMLEEIEDVLLRADLGTEVAARIAKAVGEGRYDKMISA
SDVKEIVAAEVEKVLAPVAQPLEVDAGNKPFVILMVGVNGSGKTTTIGKLSARFASEGHKVMLAAGDTFRAAAIDQLKVW
GDRTGTPVVAGAQGSDAAGLAFNALTAAKEQGRDVLLIDTAGRLQNRTELMSELEKVVRVIKKVDATAPHAVLLVLDATV
GQNALSQVEAFTKTAGVTGLVMTKLDGTARGGILVAIAEKHKLPVHFIGVGEGVEDLAPFTARDFAKAIAGTEAA
>Mature_314_residues
SDTPENSKQSWWRRLSSGLKRTSSSIGTALSEFVSKRKLDRAMLEEIEDVLLRADLGTEVAARIAKAVGEGRYDKMISAS
DVKEIVAAEVEKVLAPVAQPLEVDAGNKPFVILMVGVNGSGKTTTIGKLSARFASEGHKVMLAAGDTFRAAAIDQLKVWG
DRTGTPVVAGAQGSDAAGLAFNALTAAKEQGRDVLLIDTAGRLQNRTELMSELEKVVRVIKKVDATAPHAVLLVLDATVG
QNALSQVEAFTKTAGVTGLVMTKLDGTARGGILVAIAEKHKLPVHFIGVGEGVEDLAPFTARDFAKAIAGTEAA

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=302, Percent_Identity=30.1324503311258, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI226371618, Length=236, Percent_Identity=33.0508474576271, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI23308697, Length=298, Percent_Identity=29.1946308724832, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI295424842, Length=298, Percent_Identity=29.1946308724832, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI89061728, Length=123, Percent_Identity=31.7073170731707, Blast_Score=79, Evalue=5e-15,
Organism=Escherichia coli, GI1789874, Length=307, Percent_Identity=47.8827361563518, Blast_Score=280, Evalue=7e-77,
Organism=Escherichia coli, GI1788963, Length=275, Percent_Identity=36, Blast_Score=137, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17539958, Length=285, Percent_Identity=28.7719298245614, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=283, Percent_Identity=32.1554770318021, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6325345, Length=306, Percent_Identity=30.0653594771242, Blast_Score=144, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320498, Length=223, Percent_Identity=30.0448430493274, Blast_Score=96, Evalue=8e-21,
Organism=Drosophila melanogaster, GI17647949, Length=282, Percent_Identity=31.2056737588652, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24641198, Length=290, Percent_Identity=29.3103448275862, Blast_Score=121, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33143; Mature: 33012

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPENSKQSWWRRLSSGLKRTSSSIGTALSEFVSKRKLDRAMLEEIEDVLLRADLGTE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VAARIAKAVGEGRYDKMISASDVKEIVAAEVEKVLAPVAQPLEVDAGNKPFVILMVGVNG
HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC
SGKTTTIGKLSARFASEGHKVMLAAGDTFRAAAIDQLKVWGDRTGTPVVAGAQGSDAAGL
CCCEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCH
AFNALTAAKEQGRDVLLIDTAGRLQNRTELMSELEKVVRVIKKVDATAPHAVLLVLDATV
HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHH
GQNALSQVEAFTKTAGVTGLVMTKLDGTARGGILVAIAEKHKLPVHFIGVGEGVEDLAPF
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHCCH
TARDFAKAIAGTEAA
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDTPENSKQSWWRRLSSGLKRTSSSIGTALSEFVSKRKLDRAMLEEIEDVLLRADLGTE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VAARIAKAVGEGRYDKMISASDVKEIVAAEVEKVLAPVAQPLEVDAGNKPFVILMVGVNG
HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC
SGKTTTIGKLSARFASEGHKVMLAAGDTFRAAAIDQLKVWGDRTGTPVVAGAQGSDAAGL
CCCEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCH
AFNALTAAKEQGRDVLLIDTAGRLQNRTELMSELEKVVRVIKKVDATAPHAVLLVLDATV
HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHH
GQNALSQVEAFTKTAGVTGLVMTKLDGTARGGILVAIAEKHKLPVHFIGVGEGVEDLAPF
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHCCH
TARDFAKAIAGTEAA
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]