| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is ispZ [H]
Identifier: 192288637
GI number: 192288637
Start: 224619
End: 225236
Strand: Reverse
Name: ispZ [H]
Synonym: Rpal_0206
Alternate gene names: 192288637
Gene position: 225236-224619 (Counterclockwise)
Preceding gene: 192288638
Following gene: 192288630
Centisome position: 3.92
GC content: 64.72
Gene sequence:
>618_bases ATGACGGACGACCTGCTCAAGCCCAATCGGCCGCACCCGCTGTTCAAGCTGGCGACCGAGCTCGGGCCGCTGCTGGTGTT CTTCATCGTCAACGCCAAGTTTCATCTGTTCGCCGCGACCGGCGCCTTCATGGTGGCTGTGGTGGCTGCCGTGATCGCGT CCTACGTCGTCACCCGGCACGTGCCGGTGATGGCGCTGGTCACCGCCGTGGTGGTGCTGGTGTTCGGCACCCTGACGCTG GTGCTGCACGACGAGACCTTCATCAAGATGAAGCCGACCATCGTGTACTCGCTATTCGGCGCGGTGCTCGGCGGCGGGCT GCTGTTCGGCCGCAGCTTCATCGCCATCATGTTCGATCAGGTGTTCAACCTGACGGCGGCGGGCTGGCGCAAGCTCACGC TGCGCTGGGCGCTGTTCTTCTTTGCGATGGCGCTGCTGAACGAAGCGGTGTGGCGGACGCAGTCGACCGACTTCTGGGTC AACTTCAAGGTCTTCGGCGTGGTGCCGCTTACCATGCTGTTCGCGCTGCTGCAGATGCCGCTGACCAAGCGCTACGCGGC TGAACCCGCCACGCTCGAACAGAGCGCAGCCGACGAAGGCGACGTGTCGGGGCGCTGA
Upstream 100 bases:
>100_bases AGCTGCCGGTGCATTTCATCGGCGTCGGCGAGGGCGTCGAGGATCTGGCGCCGTTCACCGCGCGCGATTTCGCCAAGGCG ATCGCCGGCACGGAGGCGGC
Downstream 100 bases:
>100_bases GGCTGCTTGGCCCCAGGCCGTCATTGCCGGGCTTGATGTTCAGCCCGGCAATCCATCTTGTTGTGAAGGGATGGACGCCC GGGTCGAGCCTGGGCATGAC
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTDDLLKPNRPHPLFKLATELGPLLVFFIVNAKFHLFAATGAFMVAVVAAVIASYVVTRHVPVMALVTAVVVLVFGTLTL VLHDETFIKMKPTIVYSLFGAVLGGGLLFGRSFIAIMFDQVFNLTAAGWRKLTLRWALFFFAMALLNEAVWRTQSTDFWV NFKVFGVVPLTMLFALLQMPLTKRYAAEPATLEQSAADEGDVSGR
Sequences:
>Translated_205_residues MTDDLLKPNRPHPLFKLATELGPLLVFFIVNAKFHLFAATGAFMVAVVAAVIASYVVTRHVPVMALVTAVVVLVFGTLTL VLHDETFIKMKPTIVYSLFGAVLGGGLLFGRSFIAIMFDQVFNLTAAGWRKLTLRWALFFFAMALLNEAVWRTQSTDFWV NFKVFGVVPLTMLFALLQMPLTKRYAAEPATLEQSAADEGDVSGR >Mature_204_residues TDDLLKPNRPHPLFKLATELGPLLVFFIVNAKFHLFAATGAFMVAVVAAVIASYVVTRHVPVMALVTAVVVLVFGTLTLV LHDETFIKMKPTIVYSLFGAVLGGGLLFGRSFIAIMFDQVFNLTAAGWRKLTLRWALFFFAMALLNEAVWRTQSTDFWVN FKVFGVVPLTMLFALLQMPLTKRYAAEPATLEQSAADEGDVSGR
Specific function: Involved in cell division; probably involved in intracellular septation [H]
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family [H]
Homologues:
Organism=Escherichia coli, GI1787507, Length=159, Percent_Identity=43.3962264150943, Blast_Score=107, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006008 [H]
Pfam domain/function: PF04279 IspA [H]
EC number: NA
Molecular weight: Translated: 22647; Mature: 22516
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDLLKPNRPHPLFKLATELGPLLVFFIVNAKFHLFAATGAFMVAVVAAVIASYVVTRH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHC VPVMALVTAVVVLVFGTLTLVLHDETFIKMKPTIVYSLFGAVLGGGLLFGRSFIAIMFDQ CHHHHHHHHHHHHHHHHHHHHEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFNLTAAGWRKLTLRWALFFFAMALLNEAVWRTQSTDFWVNFKVFGVVPLTMLFALLQMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHCC LTKRYAAEPATLEQSAADEGDVSGR HHHHHCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure TDDLLKPNRPHPLFKLATELGPLLVFFIVNAKFHLFAATGAFMVAVVAAVIASYVVTRH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHC VPVMALVTAVVVLVFGTLTLVLHDETFIKMKPTIVYSLFGAVLGGGLLFGRSFIAIMFDQ CHHHHHHHHHHHHHHHHHHHHEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFNLTAAGWRKLTLRWALFFFAMALLNEAVWRTQSTDFWVNFKVFGVVPLTMLFALLQMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHCC LTKRYAAEPATLEQSAADEGDVSGR HHHHHCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275; 1850420 [H]