Click here to switch to the map view.

The map label for this gene is 192288569

Identifier: 192288569

GI number: 192288569

Start: 149123

End: 150115

Strand: Reverse

Name: 192288569

Synonym: Rpal_0136

Alternate gene names: NA

Gene position: 150115-149123 (Counterclockwise)

Preceding gene: 192288570

Following gene: 192288568

Centisome position: 2.61

GC content: 69.18

Gene sequence:

>993_bases
ATGTCGCCGCCACAGCATCTGATCCCCACTCGGCGCGATGTGGTGCGCGGCCTTGCGGCGCTGCCGGCGCTGGGGTTGAC
GCGGACGTTCGCCGCCGAGCCACTGACGCTGTGGGGGATTCCGGCGACGCCGTCGGCGCTGTTCGTCCGCGCCGTGGCGT
CGGAACAGCTGCAGCAGGCCGCGCCCGGGATCCGCTTTCAGCTCTGGAAGAGCACCGACCAGATGCGCGCCGGGATCGCG
TCGGGACAGTTTCGGCTGTTTGCGACTTCGACCTACGCGGCCGCCAATTTCTTCAATCGCGGCGCCGGGACGCGCATGCT
GAATGTCGTCACCTGGGGTGTGCTCTACGTGATGGCGCGCGATCCGGCCATCAGGTCGGTCGCCGATCTCGCCGGCCGCA
GCATTCTGCTGTCGAACAAGAACGAAGCGCCCGATCTGTTGTTTCGGCTGGTGCTGCGCTGGGCCGGGCTCGATCCGGAC
CGCGACGTCCGCTGCGAATATGTCGGCTCGCCGGGCGAGGCGGTGCCGCTGTTTCTCGCCGGCCGCAGCGACGTCGCCGT
GCTGCACGAACCCGCCGCCACCACCGCGCTGCTACGCGCCAAGCAGGAGGGAAAGCCGGTGTACCGAGTATTGGACATCG
CCGAACTGTACGGCCGCCACGCTGGGCGAGGACCGCGGATTCCGCAGGTCGGGCTTGCGGTCAGCGCCGACCTGCTGGAT
ACCCAGCCCGGGCTCGTCGCTGCGGTGCAGGCCGCCTGCGTCGAGGCGAGCACCTGGATCGCCGCGCATCCTGCAGAGGC
CGCCGAGCTGGCCGCGCCGGCGCTCGGCCTGCCTGCCGAAGTAATCGCGGCATCGCTGCCGCATGTCCGCCTCGACGTTG
TTCCGGCGCGGCAGGCGCGTGACGACATCGAAATGTACTTCAAGAATTTGATGGAGCTCGATCCCGGCATCGTCGGCGGC
CGGCTGCCGGACGCGGCGTTCTATGCGGGGTAG

Upstream 100 bases:

>100_bases
CCACTACGCGTCGCGCAAACGCGAGCTGCAGCACACCGTGAAGGAGATCTGGGACGATCTCACCATGAGCACGATCCTGT
ACTGACGGGGAGCGCAGGAG

Downstream 100 bases:

>100_bases
CGCGCGGGTCTCGTGGGCCTGGAGCCTGGTCGGCATCGCGCTGCTGCTGGCGCTCTGGGAGGCGGGCCATCGTGCGTATG
GGCCGTTGGTCCTTCCGGGG

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSPPQHLIPTRRDVVRGLAALPALGLTRTFAAEPLTLWGIPATPSALFVRAVASEQLQQAAPGIRFQLWKSTDQMRAGIA
SGQFRLFATSTYAAANFFNRGAGTRMLNVVTWGVLYVMARDPAIRSVADLAGRSILLSNKNEAPDLLFRLVLRWAGLDPD
RDVRCEYVGSPGEAVPLFLAGRSDVAVLHEPAATTALLRAKQEGKPVYRVLDIAELYGRHAGRGPRIPQVGLAVSADLLD
TQPGLVAAVQAACVEASTWIAAHPAEAAELAAPALGLPAEVIAASLPHVRLDVVPARQARDDIEMYFKNLMELDPGIVGG
RLPDAAFYAG

Sequences:

>Translated_330_residues
MSPPQHLIPTRRDVVRGLAALPALGLTRTFAAEPLTLWGIPATPSALFVRAVASEQLQQAAPGIRFQLWKSTDQMRAGIA
SGQFRLFATSTYAAANFFNRGAGTRMLNVVTWGVLYVMARDPAIRSVADLAGRSILLSNKNEAPDLLFRLVLRWAGLDPD
RDVRCEYVGSPGEAVPLFLAGRSDVAVLHEPAATTALLRAKQEGKPVYRVLDIAELYGRHAGRGPRIPQVGLAVSADLLD
TQPGLVAAVQAACVEASTWIAAHPAEAAELAAPALGLPAEVIAASLPHVRLDVVPARQARDDIEMYFKNLMELDPGIVGG
RLPDAAFYAG
>Mature_329_residues
SPPQHLIPTRRDVVRGLAALPALGLTRTFAAEPLTLWGIPATPSALFVRAVASEQLQQAAPGIRFQLWKSTDQMRAGIAS
GQFRLFATSTYAAANFFNRGAGTRMLNVVTWGVLYVMARDPAIRSVADLAGRSILLSNKNEAPDLLFRLVLRWAGLDPDR
DVRCEYVGSPGEAVPLFLAGRSDVAVLHEPAATTALLRAKQEGKPVYRVLDIAELYGRHAGRGPRIPQVGLAVSADLLDT
QPGLVAAVQAACVEASTWIAAHPAEAAELAAPALGLPAEVIAASLPHVRLDVVPARQARDDIEMYFKNLMELDPGIVGGR
LPDAAFYAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35264; Mature: 35133

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPQHLIPTRRDVVRGLAALPALGLTRTFAAEPLTLWGIPATPSALFVRAVASEQLQQA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
APGIRFQLWKSTDQMRAGIASGQFRLFATSTYAAANFFNRGAGTRMLNVVTWGVLYVMAR
CCCCEEEEECCHHHHHHCCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
DPAIRSVADLAGRSILLSNKNEAPDLLFRLVLRWAGLDPDRDVRCEYVGSPGEAVPLFLA
CHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEE
GRSDVAVLHEPAATTALLRAKQEGKPVYRVLDIAELYGRHAGRGPRIPQVGLAVSADLLD
CCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHC
TQPGLVAAVQAACVEASTWIAAHPAEAAELAAPALGLPAEVIAASLPHVRLDVVPARQAR
CCCCHHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCHHHH
DDIEMYFKNLMELDPGIVGGRLPDAAFYAG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPPQHLIPTRRDVVRGLAALPALGLTRTFAAEPLTLWGIPATPSALFVRAVASEQLQQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
APGIRFQLWKSTDQMRAGIASGQFRLFATSTYAAANFFNRGAGTRMLNVVTWGVLYVMAR
CCCCEEEEECCHHHHHHCCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
DPAIRSVADLAGRSILLSNKNEAPDLLFRLVLRWAGLDPDRDVRCEYVGSPGEAVPLFLA
CHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEE
GRSDVAVLHEPAATTALLRAKQEGKPVYRVLDIAELYGRHAGRGPRIPQVGLAVSADLLD
CCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHC
TQPGLVAAVQAACVEASTWIAAHPAEAAELAAPALGLPAEVIAASLPHVRLDVVPARQAR
CCCCHHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCHHHH
DDIEMYFKNLMELDPGIVGGRLPDAAFYAG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA