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The map label for this gene is 192288463

Identifier: 192288463

GI number: 192288463

Start: 33307

End: 35061

Strand: Reverse

Name: 192288463

Synonym: Rpal_0030

Alternate gene names: NA

Gene position: 35061-33307 (Counterclockwise)

Preceding gene: 192288464

Following gene: 192288462

Centisome position: 0.61

GC content: 68.6

Gene sequence:

>1755_bases
GTGTCGGCCACCCCCCGCAGAGGAATTTCGGCGCTGATCGTGGGCCGCTTCGCGCGGACCGTGATGGCGCGCGCCTCCGG
TGGTTCGGTGGCGGTGACCCGGCTGTGGCCCGGCCGCACCGATCGGCTGATCATCGCGCCGCACGATCTGCGCACCGCGG
ACGCCACCCGTGCGGCTGAGATCTACGCCGGCCGCTTTGTCTTCGCAGGCAAGATCGTCACCTGCCACGGCCGCTCGATC
TTCGATCTCGAACCGCCTTCCGACGATTGGGAAGCCGCGCTGCTCGGCTTCGGCTGGCTGCGCCACCTGCGCGCCGCCGA
TACCGCGATCACCCGCGCCAATGCCCGCTCGCTTGTCGACGACTGGCTCAGCAACATGTCGCGCACCGGCCCGGTCGGGC
GGCGGCCGGACGTGTTGGCGCGGCGGGTGATCTCGCTATTGTCGCAGGCGCCGCTGGTGCTGTCCGACACCGATGGCAAG
TTCTATCGCCGCTATTTGCGCGGCCTGACCCGCGAAATCCGAGCGCTGCGCTACGCGCTGCTCGATGTGCAGGACGGCGT
GCCGCGGCTGCAGGTGCTGATCGCGCTGTGCTACGCGTCGCTGTGCCTCGCTAACCAGGCGCGGCAGATCCGCGGCGCCA
CCAAGAAGCTGTCCGACGAGCTGCAGCGCCAAATCCTCCCCGATGGCGGCCACATCTCGCGCAATCCGAGCGCGTTGATC
GAATTGTTGATCGACCTGTTGCCGCTCCGCCAGACCTTCGCGGCCCGCAACATCGCGCCGCCGCCGGCGCTCCTCAATGC
GATCGACCGGATGATGCCGATGCTGCGGTTCTTCCGCCACGGCGACGGCAATTTCGCGTTGTTCAATGGCATGAGCGCGA
CGCCGTCCGATCTGCTCGCGACGCTGCTGGCCTATGACGACAGCCAGGGTACGCCGCTCGCCAGCATGCCGCATTCCGGC
TACCAGCGGATCGACGCCGGCACCACCCTGGTGATCGTCGATGCCGGCACGCCGCCGCCCGCCAATGTCAGCCAGGAGGC
GCATGCCGGTTGCCTGTCGTTCGAATTGTCGTCGGGCCCGTGCCGGATCGTGATCAACAGCGGCATGCCGACCACCAATC
GCGAGAGCTGGCGCGGCTTTGCCCGCTCGACGGTGGCGCACTCCACCGTCACCTGCCACGACACCTCGTCCTGCAGCTTC
GTCGAGCGCTCGGCGATGAAGCGCTTCCTGCACGGCGCGCCGGTGGTCGGCGGCCCGCGTCAGGTCGAAAACCGCCGTGA
AGAAGTTGCCGGCGGCGTGCTGCTGACGACGTCGCACGACGGCTACCGCGACAAATTCGGCGTGCTGCATCGGCGTGTCC
TCATGGTGAAGCACGACGGCAGCCGGGTCGACGGTGAGGACAGCCTGTCCCCGGTGCAGGGCGGCCGACACCGCGCCGCG
CAGGCCGACTATGCCGTGCGCTTCCACCTGCACCCGCTGGTCAAGGCCAGCCGTCTGCACGACGCCCGCGGCGTGATGCT
GGTGCTGCCCAATCGCGAGGTCTGGACCTTCGAGGCGGCGGACGACAAGGTCGACCTTGAAGAGACCGTGTTCCTGGCTG
GCAATGACGGGCCGCGGCGCTCGACCCAGATCGTGATCCGGCAGAACTCGATCGAAGCGCCGAACTTGCGCTGGAGCTTT
ATCCGCTCCAATGCCTCGCCGCAGGCGACCAGTGCCCGCCGCGCCGCCCGCCACGAGCCTGAACTGCCGCTCTGA

Upstream 100 bases:

>100_bases
CCGGACTGGACGATTGTCCGACGTCTTGCGCGGTCTGACGTCGGCCGTCCGTAGGGGGCAGCAACGTGATGCTTACCAAC
GACCCGGGGCTCTAGCGCAG

Downstream 100 bases:

>100_bases
GGCGCATTCCCTAAAATATGAAGCTTTCGGCGACCTTGGTCGCCGTTGTCGAGAGCGGTGAAAACTGCTACCGAACCCAC
GCCTCGCGCGACTGGCGACG

Product: heparinase II/III family protein

Products: NA

Alternate protein names: Heparinase II/III-Like; Heparinase II/III-Like Protein; Heparinase II/III-Like Family Protein; Cytoplasmic Protein; Heparinase II/Iii Family Protein

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSATPRRGISALIVGRFARTVMARASGGSVAVTRLWPGRTDRLIIAPHDLRTADATRAAEIYAGRFVFAGKIVTCHGRSI
FDLEPPSDDWEAALLGFGWLRHLRAADTAITRANARSLVDDWLSNMSRTGPVGRRPDVLARRVISLLSQAPLVLSDTDGK
FYRRYLRGLTREIRALRYALLDVQDGVPRLQVLIALCYASLCLANQARQIRGATKKLSDELQRQILPDGGHISRNPSALI
ELLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGNFALFNGMSATPSDLLATLLAYDDSQGTPLASMPHSG
YQRIDAGTTLVIVDAGTPPPANVSQEAHAGCLSFELSSGPCRIVINSGMPTTNRESWRGFARSTVAHSTVTCHDTSSCSF
VERSAMKRFLHGAPVVGGPRQVENRREEVAGGVLLTTSHDGYRDKFGVLHRRVLMVKHDGSRVDGEDSLSPVQGGRHRAA
QADYAVRFHLHPLVKASRLHDARGVMLVLPNREVWTFEAADDKVDLEETVFLAGNDGPRRSTQIVIRQNSIEAPNLRWSF
IRSNASPQATSARRAARHEPELPL

Sequences:

>Translated_584_residues
MSATPRRGISALIVGRFARTVMARASGGSVAVTRLWPGRTDRLIIAPHDLRTADATRAAEIYAGRFVFAGKIVTCHGRSI
FDLEPPSDDWEAALLGFGWLRHLRAADTAITRANARSLVDDWLSNMSRTGPVGRRPDVLARRVISLLSQAPLVLSDTDGK
FYRRYLRGLTREIRALRYALLDVQDGVPRLQVLIALCYASLCLANQARQIRGATKKLSDELQRQILPDGGHISRNPSALI
ELLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGNFALFNGMSATPSDLLATLLAYDDSQGTPLASMPHSG
YQRIDAGTTLVIVDAGTPPPANVSQEAHAGCLSFELSSGPCRIVINSGMPTTNRESWRGFARSTVAHSTVTCHDTSSCSF
VERSAMKRFLHGAPVVGGPRQVENRREEVAGGVLLTTSHDGYRDKFGVLHRRVLMVKHDGSRVDGEDSLSPVQGGRHRAA
QADYAVRFHLHPLVKASRLHDARGVMLVLPNREVWTFEAADDKVDLEETVFLAGNDGPRRSTQIVIRQNSIEAPNLRWSF
IRSNASPQATSARRAARHEPELPL
>Mature_583_residues
SATPRRGISALIVGRFARTVMARASGGSVAVTRLWPGRTDRLIIAPHDLRTADATRAAEIYAGRFVFAGKIVTCHGRSIF
DLEPPSDDWEAALLGFGWLRHLRAADTAITRANARSLVDDWLSNMSRTGPVGRRPDVLARRVISLLSQAPLVLSDTDGKF
YRRYLRGLTREIRALRYALLDVQDGVPRLQVLIALCYASLCLANQARQIRGATKKLSDELQRQILPDGGHISRNPSALIE
LLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGNFALFNGMSATPSDLLATLLAYDDSQGTPLASMPHSGY
QRIDAGTTLVIVDAGTPPPANVSQEAHAGCLSFELSSGPCRIVINSGMPTTNRESWRGFARSTVAHSTVTCHDTSSCSFV
ERSAMKRFLHGAPVVGGPRQVENRREEVAGGVLLTTSHDGYRDKFGVLHRRVLMVKHDGSRVDGEDSLSPVQGGRHRAAQ
ADYAVRFHLHPLVKASRLHDARGVMLVLPNREVWTFEAADDKVDLEETVFLAGNDGPRRSTQIVIRQNSIEAPNLRWSFI
RSNASPQATSARRAARHEPELPL

Specific function: Unknown

COG id: COG5360

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64157; Mature: 64026

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATPRRGISALIVGRFARTVMARASGGSVAVTRLWPGRTDRLIIAPHDLRTADATRAAE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCCHHHHHH
IYAGRFVFAGKIVTCHGRSIFDLEPPSDDWEAALLGFGWLRHLRAADTAITRANARSLVD
HHHCEEEEECEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWLSNMSRTGPVGRRPDVLARRVISLLSQAPLVLSDTDGKFYRRYLRGLTREIRALRYAL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
LDVQDGVPRLQVLIALCYASLCLANQARQIRGATKKLSDELQRQILPDGGHISRNPSALI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
ELLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGNFALFNGMSATPSDLLA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH
TLLAYDDSQGTPLASMPHSGYQRIDAGTTLVIVDAGTPPPANVSQEAHAGCLSFELSSGP
HHHHHCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCHHCCCEEEEEECCCC
CRIVINSGMPTTNRESWRGFARSTVAHSTVTCHDTSSCSFVERSAMKRFLHGAPVVGGPR
EEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHH
QVENRREEVAGGVLLTTSHDGYRDKFGVLHRRVLMVKHDGSRVDGEDSLSPVQGGRHRAA
HHHHHHHHHHCCEEEEECCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCC
QADYAVRFHLHPLVKASRLHDARGVMLVLPNREVWTFEAADDKVDLEETVFLAGNDGPRR
CCCEEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCC
STQIVIRQNSIEAPNLRWSFIRSNASPQATSARRAARHEPELPL
CEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SATPRRGISALIVGRFARTVMARASGGSVAVTRLWPGRTDRLIIAPHDLRTADATRAAE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCCHHHHHH
IYAGRFVFAGKIVTCHGRSIFDLEPPSDDWEAALLGFGWLRHLRAADTAITRANARSLVD
HHHCEEEEECEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWLSNMSRTGPVGRRPDVLARRVISLLSQAPLVLSDTDGKFYRRYLRGLTREIRALRYAL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
LDVQDGVPRLQVLIALCYASLCLANQARQIRGATKKLSDELQRQILPDGGHISRNPSALI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
ELLIDLLPLRQTFAARNIAPPPALLNAIDRMMPMLRFFRHGDGNFALFNGMSATPSDLLA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH
TLLAYDDSQGTPLASMPHSGYQRIDAGTTLVIVDAGTPPPANVSQEAHAGCLSFELSSGP
HHHHHCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCHHCCCEEEEEECCCC
CRIVINSGMPTTNRESWRGFARSTVAHSTVTCHDTSSCSFVERSAMKRFLHGAPVVGGPR
EEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHH
QVENRREEVAGGVLLTTSHDGYRDKFGVLHRRVLMVKHDGSRVDGEDSLSPVQGGRHRAA
HHHHHHHHHHCCEEEEECCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCC
QADYAVRFHLHPLVKASRLHDARGVMLVLPNREVWTFEAADDKVDLEETVFLAGNDGPRR
CCCEEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCC
STQIVIRQNSIEAPNLRWSFIRSNASPQATSARRAARHEPELPL
CEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA