| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895286
Identifier: 190895286
GI number: 190895286
Start: 1055960
End: 1058236
Strand: Reverse
Name: 190895286
Synonym: RHECIAT_PC0000959
Alternate gene names: NA
Gene position: 1058236-1055960 (Counterclockwise)
Preceding gene: 190895287
Following gene: 190895285
Centisome position: 96.95
GC content: 59.38
Gene sequence:
>2277_bases ATGCATTTTGATATTGTCCATGCAGCCGATCCTCGATTTTATGGCGGCTCCTCATCGGCGGTGCGGGTCGAGATCCAGTC CGCTCGGCAATTTGGCCTCTCAACGGCTCTGCTTCCATTTCTCGGTGTTTCCGACATTCGTTCCAGACGGTTCGAGGAAC GTCTTCTCGACGTTCTTGAGCGTCATGAGGTGCCGTGGCTGACGGGCGAGGAGGCAGTCGAGTGCGACATTCTTTTCGCG CATAATCCGCTGGCGTTCGCGCACATGCCGACACGGCCGCTGCGCCTCAGATCGAAGGTCGTCCTCCTTGCGGTCCAGCA TCCGCCCTTCGACGGAGCCGGCAATGCGCAATATAATTTCGAGGTGGTGAAACGAAATCTGGAGAGAATGTTCGGGGCGC CCGTCATCTTCGCACCGGTCGGCCCCAAGGTGCGGCATCAGTTCGAAGACATCATCGCCGGAAGACCTGAGCTCTTGCGC CATGATCTTTTCAATCTGATCGACCTTGACGAGTGGCCGATCAGGACCGCGCAGCCGCCATGCGAACGGGCGGTTATCGG CAGACATTCGCGTTGCGATCTCCTGAAATGGCCGGACACCGAGGCTGAATTGCGCGCGGCCTATCCCGATCTTGGTAATG TCCAGATCAAGGTCATGGGCGGTGTACCAGAACAAATCGTGCCTTTGATTGGATCCAACTGGAACATCTTGCCCTACTCG AACAGCGGTGTGCCTCAGTTTCTGAGCAAGCTTGATTTCTATGTGTTCTTTCACAGCCGGCGATGGGTTGAGGCGTTTGG CATTGGCATTGCGGAAGCGATGGCGAGCGGGCTTGTGACCATCCTGGACCCTTCGTTTCGTGACCTTTTCGAAGACGGTG CGGTCTATTGCCGGCCTGAGGAAACAACCAAGGTTCTGCAGAGATTTCTCGCCTCTCCCGAGGCCGTCCGCGCACAGTCG GCAGCCGCGCGCACATTGGTCGAGAAGAAGTTTTCGACGAGCCGATACCCGGATAGAATGCGTGAGCTCTATGACGAACT CGGGCTTTGCTTGCCTCCCGCGCTTGTCACCGCCGGCAACCCCGTTGACGCTGACGCTCTCTCCGCGTCGAGCGGGCACG CAACGGTCCGTTCCGGGCCGGGAAGATCCCAACGGTCGCCGACGGGACGGCGGCGCGTCCTGTTTGTCGCGACAAATGGC ATAGGCCTTGGCCATATCACGCGATTGATGGCAATCGCCGAGCGCATGTCGCCTGACATGGAGCCCGTTTTCCTGACAAT GTCGGCCGGGTCTTCGATTATCGAAGCACGGGGACACCCGGTCGACTACATACCGTCCGCCCCGAAGATCGGAGTGACGG ACGACAGCTGGAACGAGGTCTTCGCACAGGAATTGCTGGCTGCCGTGGAGGCATTTGCCATCAACAGCGTCGTCTTCGAC AGCAACCATCCCTTTCCGGGCCTGCTGAAAGTGCTGGCCGCCCGTCCCGATCTGAACTGGGTCTGGATCCGCCGCGGGAT GTGGGCTTCCCGTCACGATCTCGATCCGTTGATGCAGCATCGGTTCGACATGGTGATCGAGCCGGGCGAGTTTGCCGCGG ACGAAGATCACGGCATCACTGCGCAATTGCGCGCCGGCGTGATCGGCGTTTCTCCGATCCTCCTCATTGACAATGACGAC AGGCTCTCGCGGGCAGAAGCTGCATCGGCTCTCGGTGTCGATCCAGCCGGTCTTGTCGCCGTCGTGCAGCTCGGTTCGGA ACGAAATTTCGACGTCAGCCGGCTGCGGCCGGCGATCATCAACGGACTCCTTAAACATGGCGTCCAGGTCGTCGATGCTA TCAATCCCCTTGCCGCGAAGCGAGAGGATCATATTGCAGGCACCGTGCAAAAGGCGATTTATCCGATTGCCAGATATTTC AACGCTGTCGACCTGATGATCACGAATGCCGGCTACAACAGCTTCCACGAAGCTGTTTATGGCGGCATCCCGGCAATCTT CGTTCCGAATGAGGCGCCCGAGATGGACGAGCAAGCCATCCGAGCCGCCTATGCGCAAAGCGCCGGTTTGGGGCTCTGTC TCAGAGCAGTCGATGTCGAGCGAGCGCACGAGGCGGTCGAACTCGCCCTGTCGGAGGATTTTCTCGCCCAGCAGCGGATG CGAGCAGGCCGCATCGTTTTTGCCAATGGCGCACGTGAAGCGGCACGAGCGATCGAAGAGCTCGCATTCTCTGTCAGAAC TGATCGCGCGCTGGGGGGAGCGATCGCACGCGTATGA
Upstream 100 bases:
>100_bases AACTCGTCTTTCGGCCGCAGCGGCAGCGCTTATTGAAGCAACCAACCTGTCAACGGCGAACTGACTCTGGTAGCATTGAT AGACCCAATCTGGCTTTCGA
Downstream 100 bases:
>100_bases CACTTTCCCCACTGCTCCGATTGCGTGGATCGGGCCGAGTGCCTCCTTTCGGGCGTGTCGGGCGGTCTAGCGGGCAGCCA GGCGACAGGCATCGGATTGC
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Antifreeze Protein Type I; Glycosyltransferase Protein; UDP-N-AcetylglucosamineLPS N-Acetylglucosamine Transferase; Udp-Glucuronosyl/Udp-Glucosyltransferase Family Protein
Number of amino acids: Translated: 758; Mature: 758
Protein sequence:
>758_residues MHFDIVHAADPRFYGGSSSAVRVEIQSARQFGLSTALLPFLGVSDIRSRRFEERLLDVLERHEVPWLTGEEAVECDILFA HNPLAFAHMPTRPLRLRSKVVLLAVQHPPFDGAGNAQYNFEVVKRNLERMFGAPVIFAPVGPKVRHQFEDIIAGRPELLR HDLFNLIDLDEWPIRTAQPPCERAVIGRHSRCDLLKWPDTEAELRAAYPDLGNVQIKVMGGVPEQIVPLIGSNWNILPYS NSGVPQFLSKLDFYVFFHSRRWVEAFGIGIAEAMASGLVTILDPSFRDLFEDGAVYCRPEETTKVLQRFLASPEAVRAQS AAARTLVEKKFSTSRYPDRMRELYDELGLCLPPALVTAGNPVDADALSASSGHATVRSGPGRSQRSPTGRRRVLFVATNG IGLGHITRLMAIAERMSPDMEPVFLTMSAGSSIIEARGHPVDYIPSAPKIGVTDDSWNEVFAQELLAAVEAFAINSVVFD SNHPFPGLLKVLAARPDLNWVWIRRGMWASRHDLDPLMQHRFDMVIEPGEFAADEDHGITAQLRAGVIGVSPILLIDNDD RLSRAEAASALGVDPAGLVAVVQLGSERNFDVSRLRPAIINGLLKHGVQVVDAINPLAAKREDHIAGTVQKAIYPIARYF NAVDLMITNAGYNSFHEAVYGGIPAIFVPNEAPEMDEQAIRAAYAQSAGLGLCLRAVDVERAHEAVELALSEDFLAQQRM RAGRIVFANGAREAARAIEELAFSVRTDRALGGAIARV
Sequences:
>Translated_758_residues MHFDIVHAADPRFYGGSSSAVRVEIQSARQFGLSTALLPFLGVSDIRSRRFEERLLDVLERHEVPWLTGEEAVECDILFA HNPLAFAHMPTRPLRLRSKVVLLAVQHPPFDGAGNAQYNFEVVKRNLERMFGAPVIFAPVGPKVRHQFEDIIAGRPELLR HDLFNLIDLDEWPIRTAQPPCERAVIGRHSRCDLLKWPDTEAELRAAYPDLGNVQIKVMGGVPEQIVPLIGSNWNILPYS NSGVPQFLSKLDFYVFFHSRRWVEAFGIGIAEAMASGLVTILDPSFRDLFEDGAVYCRPEETTKVLQRFLASPEAVRAQS AAARTLVEKKFSTSRYPDRMRELYDELGLCLPPALVTAGNPVDADALSASSGHATVRSGPGRSQRSPTGRRRVLFVATNG IGLGHITRLMAIAERMSPDMEPVFLTMSAGSSIIEARGHPVDYIPSAPKIGVTDDSWNEVFAQELLAAVEAFAINSVVFD SNHPFPGLLKVLAARPDLNWVWIRRGMWASRHDLDPLMQHRFDMVIEPGEFAADEDHGITAQLRAGVIGVSPILLIDNDD RLSRAEAASALGVDPAGLVAVVQLGSERNFDVSRLRPAIINGLLKHGVQVVDAINPLAAKREDHIAGTVQKAIYPIARYF NAVDLMITNAGYNSFHEAVYGGIPAIFVPNEAPEMDEQAIRAAYAQSAGLGLCLRAVDVERAHEAVELALSEDFLAQQRM RAGRIVFANGAREAARAIEELAFSVRTDRALGGAIARV >Mature_758_residues MHFDIVHAADPRFYGGSSSAVRVEIQSARQFGLSTALLPFLGVSDIRSRRFEERLLDVLERHEVPWLTGEEAVECDILFA HNPLAFAHMPTRPLRLRSKVVLLAVQHPPFDGAGNAQYNFEVVKRNLERMFGAPVIFAPVGPKVRHQFEDIIAGRPELLR HDLFNLIDLDEWPIRTAQPPCERAVIGRHSRCDLLKWPDTEAELRAAYPDLGNVQIKVMGGVPEQIVPLIGSNWNILPYS NSGVPQFLSKLDFYVFFHSRRWVEAFGIGIAEAMASGLVTILDPSFRDLFEDGAVYCRPEETTKVLQRFLASPEAVRAQS AAARTLVEKKFSTSRYPDRMRELYDELGLCLPPALVTAGNPVDADALSASSGHATVRSGPGRSQRSPTGRRRVLFVATNG IGLGHITRLMAIAERMSPDMEPVFLTMSAGSSIIEARGHPVDYIPSAPKIGVTDDSWNEVFAQELLAAVEAFAINSVVFD SNHPFPGLLKVLAARPDLNWVWIRRGMWASRHDLDPLMQHRFDMVIEPGEFAADEDHGITAQLRAGVIGVSPILLIDNDD RLSRAEAASALGVDPAGLVAVVQLGSERNFDVSRLRPAIINGLLKHGVQVVDAINPLAAKREDHIAGTVQKAIYPIARYF NAVDLMITNAGYNSFHEAVYGGIPAIFVPNEAPEMDEQAIRAAYAQSAGLGLCLRAVDVERAHEAVELALSEDFLAQQRM RAGRIVFANGAREAARAIEELAFSVRTDRALGGAIARV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83383; Mature: 83383
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFDIVHAADPRFYGGSSSAVRVEIQSARQFGLSTALLPFLGVSDIRSRRFEERLLDVLE CCEEEEECCCCCEECCCCCEEEEEEHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHH RHEVPWLTGEEAVECDILFAHNPLAFAHMPTRPLRLRSKVVLLAVQHPPFDGAGNAQYNF HCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCHHCCCEEEEEEEECCCCCCCCCCCCHH EVVKRNLERMFGAPVIFAPVGPKVRHQFEDIIAGRPELLRHDLFNLIDLDEWPIRTAQPP HHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC CERAVIGRHSRCDLLKWPDTEAELRAAYPDLGNVQIKVMGGVPEQIVPLIGSNWNILPYS HHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCEEEECC NSGVPQFLSKLDFYVFFHSRRWVEAFGIGIAEAMASGLVTILDPSFRDLFEDGAVYCRPE CCCHHHHHHHCCEEEEEECCHHHHHHCCHHHHHHHCCCEEEECCCHHHHHHCCCEEECCH ETTKVLQRFLASPEAVRAQSAAARTLVEKKFSTSRYPDRMRELYDELGLCLPPALVTAGN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCC PVDADALSASSGHATVRSGPGRSQRSPTGRRRVLFVATNGIGLGHITRLMAIAERMSPDM CCCHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCC EPVFLTMSAGSSIIEARGHPVDYIPSAPKIGVTDDSWNEVFAQELLAAVEAFAINSVVFD CEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEC SNHPFPGLLKVLAARPDLNWVWIRRGMWASRHDLDPLMQHRFDMVIEPGEFAADEDHGIT CCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHCEEECCCCCCCCCCCCCC AQLRAGVIGVSPILLIDNDDRLSRAEAASALGVDPAGLVAVVQLGSERNFDVSRLRPAII HHHHCCEEECCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCHHHHHHHHH NGLLKHGVQVVDAINPLAAKREDHIAGTVQKAIYPIARYFNAVDLMITNAGYNSFHEAVY HHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHH GGIPAIFVPNEAPEMDEQAIRAAYAQSAGLGLCLRAVDVERAHEAVELALSEDFLAQQRM CCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAGRIVFANGAREAARAIEELAFSVRTDRALGGAIARV HCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure MHFDIVHAADPRFYGGSSSAVRVEIQSARQFGLSTALLPFLGVSDIRSRRFEERLLDVLE CCEEEEECCCCCEECCCCCEEEEEEHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHH RHEVPWLTGEEAVECDILFAHNPLAFAHMPTRPLRLRSKVVLLAVQHPPFDGAGNAQYNF HCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCHHCCCEEEEEEEECCCCCCCCCCCCHH EVVKRNLERMFGAPVIFAPVGPKVRHQFEDIIAGRPELLRHDLFNLIDLDEWPIRTAQPP HHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC CERAVIGRHSRCDLLKWPDTEAELRAAYPDLGNVQIKVMGGVPEQIVPLIGSNWNILPYS HHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCEEEECC NSGVPQFLSKLDFYVFFHSRRWVEAFGIGIAEAMASGLVTILDPSFRDLFEDGAVYCRPE CCCHHHHHHHCCEEEEEECCHHHHHHCCHHHHHHHCCCEEEECCCHHHHHHCCCEEECCH ETTKVLQRFLASPEAVRAQSAAARTLVEKKFSTSRYPDRMRELYDELGLCLPPALVTAGN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCC PVDADALSASSGHATVRSGPGRSQRSPTGRRRVLFVATNGIGLGHITRLMAIAERMSPDM CCCHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCC EPVFLTMSAGSSIIEARGHPVDYIPSAPKIGVTDDSWNEVFAQELLAAVEAFAINSVVFD CEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEC SNHPFPGLLKVLAARPDLNWVWIRRGMWASRHDLDPLMQHRFDMVIEPGEFAADEDHGIT CCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHCEEECCCCCCCCCCCCCC AQLRAGVIGVSPILLIDNDDRLSRAEAASALGVDPAGLVAVVQLGSERNFDVSRLRPAII HHHHCCEEECCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCHHHHHHHHH NGLLKHGVQVVDAINPLAAKREDHIAGTVQKAIYPIARYFNAVDLMITNAGYNSFHEAVY HHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHH GGIPAIFVPNEAPEMDEQAIRAAYAQSAGLGLCLRAVDVERAHEAVELALSEDFLAQQRM CCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAGRIVFANGAREAARAIEELAFSVRTDRALGGAIARV HCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA