Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is 190895285

Identifier: 190895285

GI number: 190895285

Start: 1053461

End: 1055767

Strand: Reverse

Name: 190895285

Synonym: RHECIAT_PC0000958

Alternate gene names: NA

Gene position: 1055767-1053461 (Counterclockwise)

Preceding gene: 190895286

Following gene: 190895284

Centisome position: 96.72

GC content: 59.56

Gene sequence:

>2307_bases
ATGGCTGATGATCGCAAGACAACCGTCCAGACGCCGCTTGGATCCGAAGCGCTGACCTTCACGCATCTCATCGGTCGCGA
TGAGGTCAGCCGGTGTTTTGCCTTCACCGTCGGCTTCATCAGTTCCGATGAGAATGTCGACGCACTGAAGCTGCTCGGAA
AACCCCTGTCGATAGAAGGAGAAAGCGGAGACAAGAAACGCTGGTTCAGCGGGCTCGTCACCGATTTTCGCCTGACGCGC
ATCGAGGAGAGGTTTGCCTACTACGAGGCGGAGGTGCGACCCTGGCTTTGGCTGCTCGGCAACAGCACCGATTGCCGTAT
CTTCCAGAATATGAGCGTCGTCGAAATCGTCGAGAAGATCTTCTCGAAATACAAGGCGGCAAAATACGAAAAGCGGTTGC
AGGGTACCTACGAAGCGCGGGAATACTGCGTGCAATATGACGAGACCGACCTTGACTTCGTGCAGAGGCTGCTCGAGCAC
GAAGGCATCATGTATTTCTTCGAGTATGGCGAGGGCGAACACACCCTCGTCCTGGCCGACGCCATGAACAAGCTGAAGCC
GGTGCCAGGCTATAGCAGCGTCAAGTTCCGGGCCGAGGGCGATCCCGTGCGTCGGGATGAGGAATACATGACGGACTGGG
TTTCGACCAGTTCCGTCCAGCCCGGCACTTTTGCCCACACGGACTACGACTTCACCAAGCCGGGCGCCGACCTCATGGCG
CAATCGGCGCAACCGTTCTCTCACGCAGAGGCCCAGGGAGAGCATTATCGCCATCCGGGCGCGCATCTGACGGTCGGCCG
GGGCGATGCGGTTGCCGTCGTGCGGCGGGAGGAAATTCAGGCGGCACATCAACGGATCGCCGCTGCCGGCACGGTGCGGG
GTCTGGCTTCCGGTTGCACTTTCAAACTCGAGAATTTCCCGCGCAAGGACCAGAACGCGGAATACGTTGTGCTGCACGCC
GACTATCGCCTCTTCGATCCGGGGTACCGACCTGCCGCCTATGCAGGGGAAGAAACCTTTCGAGCCACATTCCAGGTCGC
TCCAACCTCCATCACTTATCGGCCGCCTCGCAACACGATAAGGCCGGTCATGCGCGGGCCCCAGACCGCGACCGTGGTCG
GTCCCGCGGGCGAGGAAATTTTCACCGACAAATATGCCCGCGTGAAAGTGCAGTTCCACTGGGATCGCCTCGGCAAGAAG
GATCAGAACAGCTCCTGTTTTGTGCGCGTGTCGCAGACCTGGAGCGGCGCTGGCTGGGGCTTCATTCAGATTCCGCGGAT
CGGCCAGGAAGTGATTGTCGACTTTCTCGAAGGGGATCCTGATCGACCCATCATCACCGGCAGGGTCTATAACGGCAAGG
AGATGCCGCCCTACGAGTTGCCGGGAAACGCCACGCAATCCGGATTGAAGACGAATTCGTCGCCGGGAGGCGGTGGCTGG
AACGAATTGCGTTTCGAAGACAAAGCCGGTTCGGAGGAGGTCTATTTCCAGGCGCAGAAGGACCACAACCTCCTGGTCAA
ACACGATCGCAGCAAGCTCGTCCAACACGACCAGTCGGATCGCATCGACAACAACGCCAAGCACTCAGTCGGCGTGAACC
TCGACGAGGATGTCGGCAATAACAAGACGACCAAGGTGGGTGTCGACCGCACCGTCAATATCGGATCGAACGACACCGAG
ACGGTGGGATCCAATCGCTCTCTTACAGTCGGTTCCAACGAGACGATCAGTATCGGCTCAAACTCGACGGAAACCATCGG
TGCCAGTCATACCCAGACCGTCGCAATCGTCCAGACGGTGACGGTTGGCGCGGCACGCGTCGATACCGTCGGCGGGCCGG
AGACACGATCGGTCGGCGCGACGCAATCAAACACGATCGGCGCGTCCCGTTCTGTCAGCGTCGGTGCCGGCCAGAGCCAC
GAAGTGGGCTCCTCGGACAGCTGGAATATCGGTTCCGACCAGAGCGTGTCGATCGCCGGTGGGCAGACGAGCAGCATCGG
CAAGGCGCGTAGCGCCAAGATCGGCGATGACGATTCGACGGAGATCGGCGCAAGCAGGGCGGTGAAAGTCGCCAAGGGCA
GTCTTGTCGAGGTGGGCGAAGACGGAGCGATCAAGATCGGTCAGGACCTGCTGATCGAAGCGGGGGACTCGGTCGTCATC
AAGTGCGGGTCGGCAAGCATCGCGATGAAGAAGGACGGCACGATCTCGATCGAAGGCAAGGACATTTCGATCAACGCCTC
GGGTAAATTCAATGGCAAGGCCTCGGGAGAGGTCACATGGAAGGGCAGCAAGATCAATCATAATTGA

Upstream 100 bases:

>100_bases
CGGATTGCTGCAGTGTCGATGTCCCTTCCGGGGCGACGGGCCTTTGTGCTAGGCTTCTTCATCGGGATCGCCGGCGTCAC
GGGACAGGGGCATTCTCCGC

Downstream 100 bases:

>100_bases
GGATGGGTCATATGTCCGACATTCTGGAGCGGATTGAGGGAGTAGTCATCGGGCTGTTGCTGGGTTTCGATGCAGGCGTG
CCATTGGTCGTGTTTCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr-Related Protein; RHS Accessory Genetic Element; VgrG Family T6SS G; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Fimbrial Operon Related Protein; Vgr Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 768; Mature: 767

Protein sequence:

>768_residues
MADDRKTTVQTPLGSEALTFTHLIGRDEVSRCFAFTVGFISSDENVDALKLLGKPLSIEGESGDKKRWFSGLVTDFRLTR
IEERFAYYEAEVRPWLWLLGNSTDCRIFQNMSVVEIVEKIFSKYKAAKYEKRLQGTYEAREYCVQYDETDLDFVQRLLEH
EGIMYFFEYGEGEHTLVLADAMNKLKPVPGYSSVKFRAEGDPVRRDEEYMTDWVSTSSVQPGTFAHTDYDFTKPGADLMA
QSAQPFSHAEAQGEHYRHPGAHLTVGRGDAVAVVRREEIQAAHQRIAAAGTVRGLASGCTFKLENFPRKDQNAEYVVLHA
DYRLFDPGYRPAAYAGEETFRATFQVAPTSITYRPPRNTIRPVMRGPQTATVVGPAGEEIFTDKYARVKVQFHWDRLGKK
DQNSSCFVRVSQTWSGAGWGFIQIPRIGQEVIVDFLEGDPDRPIITGRVYNGKEMPPYELPGNATQSGLKTNSSPGGGGW
NELRFEDKAGSEEVYFQAQKDHNLLVKHDRSKLVQHDQSDRIDNNAKHSVGVNLDEDVGNNKTTKVGVDRTVNIGSNDTE
TVGSNRSLTVGSNETISIGSNSTETIGASHTQTVAIVQTVTVGAARVDTVGGPETRSVGATQSNTIGASRSVSVGAGQSH
EVGSSDSWNIGSDQSVSIAGGQTSSIGKARSAKIGDDDSTEIGASRAVKVAKGSLVEVGEDGAIKIGQDLLIEAGDSVVI
KCGSASIAMKKDGTISIEGKDISINASGKFNGKASGEVTWKGSKINHN

Sequences:

>Translated_768_residues
MADDRKTTVQTPLGSEALTFTHLIGRDEVSRCFAFTVGFISSDENVDALKLLGKPLSIEGESGDKKRWFSGLVTDFRLTR
IEERFAYYEAEVRPWLWLLGNSTDCRIFQNMSVVEIVEKIFSKYKAAKYEKRLQGTYEAREYCVQYDETDLDFVQRLLEH
EGIMYFFEYGEGEHTLVLADAMNKLKPVPGYSSVKFRAEGDPVRRDEEYMTDWVSTSSVQPGTFAHTDYDFTKPGADLMA
QSAQPFSHAEAQGEHYRHPGAHLTVGRGDAVAVVRREEIQAAHQRIAAAGTVRGLASGCTFKLENFPRKDQNAEYVVLHA
DYRLFDPGYRPAAYAGEETFRATFQVAPTSITYRPPRNTIRPVMRGPQTATVVGPAGEEIFTDKYARVKVQFHWDRLGKK
DQNSSCFVRVSQTWSGAGWGFIQIPRIGQEVIVDFLEGDPDRPIITGRVYNGKEMPPYELPGNATQSGLKTNSSPGGGGW
NELRFEDKAGSEEVYFQAQKDHNLLVKHDRSKLVQHDQSDRIDNNAKHSVGVNLDEDVGNNKTTKVGVDRTVNIGSNDTE
TVGSNRSLTVGSNETISIGSNSTETIGASHTQTVAIVQTVTVGAARVDTVGGPETRSVGATQSNTIGASRSVSVGAGQSH
EVGSSDSWNIGSDQSVSIAGGQTSSIGKARSAKIGDDDSTEIGASRAVKVAKGSLVEVGEDGAIKIGQDLLIEAGDSVVI
KCGSASIAMKKDGTISIEGKDISINASGKFNGKASGEVTWKGSKINHN
>Mature_767_residues
ADDRKTTVQTPLGSEALTFTHLIGRDEVSRCFAFTVGFISSDENVDALKLLGKPLSIEGESGDKKRWFSGLVTDFRLTRI
EERFAYYEAEVRPWLWLLGNSTDCRIFQNMSVVEIVEKIFSKYKAAKYEKRLQGTYEAREYCVQYDETDLDFVQRLLEHE
GIMYFFEYGEGEHTLVLADAMNKLKPVPGYSSVKFRAEGDPVRRDEEYMTDWVSTSSVQPGTFAHTDYDFTKPGADLMAQ
SAQPFSHAEAQGEHYRHPGAHLTVGRGDAVAVVRREEIQAAHQRIAAAGTVRGLASGCTFKLENFPRKDQNAEYVVLHAD
YRLFDPGYRPAAYAGEETFRATFQVAPTSITYRPPRNTIRPVMRGPQTATVVGPAGEEIFTDKYARVKVQFHWDRLGKKD
QNSSCFVRVSQTWSGAGWGFIQIPRIGQEVIVDFLEGDPDRPIITGRVYNGKEMPPYELPGNATQSGLKTNSSPGGGGWN
ELRFEDKAGSEEVYFQAQKDHNLLVKHDRSKLVQHDQSDRIDNNAKHSVGVNLDEDVGNNKTTKVGVDRTVNIGSNDTET
VGSNRSLTVGSNETISIGSNSTETIGASHTQTVAIVQTVTVGAARVDTVGGPETRSVGATQSNTIGASRSVSVGAGQSHE
VGSSDSWNIGSDQSVSIAGGQTSSIGKARSAKIGDDDSTEIGASRAVKVAKGSLVEVGEDGAIKIGQDLLIEAGDSVVIK
CGSASIAMKKDGTISIEGKDISINASGKFNGKASGEVTWKGSKINHN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83749; Mature: 83618

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDRKTTVQTPLGSEALTFTHLIGRDEVSRCFAFTVGFISSDENVDALKLLGKPLSIEG
CCCCCCCEEECCCCCCCEEEHHHHCHHHHHHHEEEEEEEECCCCCCHHHHHCCCCCEEEC
ESGDKKRWFSGLVTDFRLTRIEERFAYYEAEVRPWLWLLGNSTDCRIFQNMSVVEIVEKI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCHHHHHHHH
FSKYKAAKYEKRLQGTYEAREYCVQYDETDLDFVQRLLEHEGIMYFFEYGEGEHTLVLAD
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCEEEEEEE
AMNKLKPVPGYSSVKFRAEGDPVRRDEEYMTDWVSTSSVQPGTFAHTDYDFTKPGADLMA
HHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHH
QSAQPFSHAEAQGEHYRHPGAHLTVGRGDAVAVVRREEIQAAHQRIAAAGTVRGLASGCT
CCCCCCHHHHCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCE
FKLENFPRKDQNAEYVVLHADYRLFDPGYRPAAYAGEETFRATFQVAPTSITYRPPRNTI
EEECCCCCCCCCCCEEEEEECEEEECCCCCCCCCCCCCCEEEEEEECCCEEEECCCCHHH
RPVMRGPQTATVVGPAGEEIFTDKYARVKVQFHWDRLGKKDQNSSCFVRVSQTWSGAGWG
HHHHCCCCEEEEECCCCCHHHCCCEEEEEEEEEHHHCCCCCCCCCEEEEEECCCCCCCCC
FIQIPRIGQEVIVDFLEGDPDRPIITGRVYNGKEMPPYELPGNATQSGLKTNSSPGGGGW
EEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NELRFEDKAGSEEVYFQAQKDHNLLVKHDRSKLVQHDQSDRIDNNAKHSVGVNLDEDVGN
CCEEECCCCCCCEEEEEECCCCCEEEEECHHHHHCCCCCCCCCCCCCCEECCCCHHCCCC
NKTTKVGVDRTVNIGSNDTETVGSNRSLTVGSNETISIGSNSTETIGASHTQTVAIVQTV
CCCEEEECCEEEECCCCCCHHCCCCCEEEECCCCEEEECCCCCCCCCCCCCEEEEEEEEE
TVGAARVDTVGGPETRSVGATQSNTIGASRSVSVGAGQSHEVGSSDSWNIGSDQSVSIAG
EECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
GQTSSIGKARSAKIGDDDSTEIGASRAVKVAKGSLVEVGEDGAIKIGQDLLIEAGDSVVI
CCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCEEEECCCCCEEECCEEEEECCCEEEE
KCGSASIAMKKDGTISIEGKDISINASGKFNGKASGEVTWKGSKINHN
EECCCEEEEECCCEEEEECCEEEEECCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
ADDRKTTVQTPLGSEALTFTHLIGRDEVSRCFAFTVGFISSDENVDALKLLGKPLSIEG
CCCCCCEEECCCCCCCEEEHHHHCHHHHHHHEEEEEEEECCCCCCHHHHHCCCCCEEEC
ESGDKKRWFSGLVTDFRLTRIEERFAYYEAEVRPWLWLLGNSTDCRIFQNMSVVEIVEKI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCHHHHHHHH
FSKYKAAKYEKRLQGTYEAREYCVQYDETDLDFVQRLLEHEGIMYFFEYGEGEHTLVLAD
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCEEEEEEE
AMNKLKPVPGYSSVKFRAEGDPVRRDEEYMTDWVSTSSVQPGTFAHTDYDFTKPGADLMA
HHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHH
QSAQPFSHAEAQGEHYRHPGAHLTVGRGDAVAVVRREEIQAAHQRIAAAGTVRGLASGCT
CCCCCCHHHHCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCE
FKLENFPRKDQNAEYVVLHADYRLFDPGYRPAAYAGEETFRATFQVAPTSITYRPPRNTI
EEECCCCCCCCCCCEEEEEECEEEECCCCCCCCCCCCCCEEEEEEECCCEEEECCCCHHH
RPVMRGPQTATVVGPAGEEIFTDKYARVKVQFHWDRLGKKDQNSSCFVRVSQTWSGAGWG
HHHHCCCCEEEEECCCCCHHHCCCEEEEEEEEEHHHCCCCCCCCCEEEEEECCCCCCCCC
FIQIPRIGQEVIVDFLEGDPDRPIITGRVYNGKEMPPYELPGNATQSGLKTNSSPGGGGW
EEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NELRFEDKAGSEEVYFQAQKDHNLLVKHDRSKLVQHDQSDRIDNNAKHSVGVNLDEDVGN
CCEEECCCCCCCEEEEEECCCCCEEEEECHHHHHCCCCCCCCCCCCCCEECCCCHHCCCC
NKTTKVGVDRTVNIGSNDTETVGSNRSLTVGSNETISIGSNSTETIGASHTQTVAIVQTV
CCCEEEECCEEEECCCCCCHHCCCCCEEEECCCCEEEECCCCCCCCCCCCCEEEEEEEEE
TVGAARVDTVGGPETRSVGATQSNTIGASRSVSVGAGQSHEVGSSDSWNIGSDQSVSIAG
EECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
GQTSSIGKARSAKIGDDDSTEIGASRAVKVAKGSLVEVGEDGAIKIGQDLLIEAGDSVVI
CCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCEEEECCCCCEEECCEEEEECCCEEEE
KCGSASIAMKKDGTISIEGKDISINASGKFNGKASGEVTWKGSKINHN
EECCCEEEEECCCEEEEECCEEEEECCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA