| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895214
Identifier: 190895214
GI number: 190895214
Start: 981986
End: 982252
Strand: Reverse
Name: 190895214
Synonym: RHECIAT_PC0000887
Alternate gene names: NA
Gene position: 982252-981986 (Counterclockwise)
Preceding gene: 190895215
Following gene: 190895213
Centisome position: 89.99
GC content: 58.43
Gene sequence:
>267_bases ATGCCCAAACCAATCGGTTCCTATTCAATCAGCGATCTCTCGCGCAAATCCGGCGATATCATCGCGGAGGCCCTGCGCCG TCCTGTAATCATCACCCAGCGCAACAAGCCTCGTCTCGTCCTCCTCAATATTGAAGGCTACGAGCGACTGATGAAGCGGT CTGATCGGCGCACCGCCGGGACTATCGAAACGGTGCCCGATGTACTCTTCGCCGAATTCGAAAACGCCGTCGAGGCCTAT GCCGGCGAAGACGCATCGGGCCGCTGA
Upstream 100 bases:
>100_bases AATTCTCTTCCAGCCGAATCCACTGCATCCAAAATGCGGAAACGACAGCATTGTTGAAAATGCTGCATATGGTAACGCCA TAGCAACAAGGAGGGCGCCC
Downstream 100 bases:
>100_bases TGAACTACGAGCTGATCGCGACTGCCAGCGTTGTTCGCTATCCTATCTGTGGGCACGTGAGGCTGGGCGTGAGAGACGGA AGGACGCAAGGATCGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MPKPIGSYSISDLSRKSGDIIAEALRRPVIITQRNKPRLVLLNIEGYERLMKRSDRRTAGTIETVPDVLFAEFENAVEAY AGEDASGR
Sequences:
>Translated_88_residues MPKPIGSYSISDLSRKSGDIIAEALRRPVIITQRNKPRLVLLNIEGYERLMKRSDRRTAGTIETVPDVLFAEFENAVEAY AGEDASGR >Mature_87_residues PKPIGSYSISDLSRKSGDIIAEALRRPVIITQRNKPRLVLLNIEGYERLMKRSDRRTAGTIETVPDVLFAEFENAVEAYA GEDASGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006442 [H]
Pfam domain/function: PF02604 PhdYeFM [H]
EC number: NA
Molecular weight: Translated: 9821; Mature: 9690
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPIGSYSISDLSRKSGDIIAEALRRPVIITQRNKPRLVLLNIEGYERLMKRSDRRTAG CCCCCCCCCCHHHHCCCCHHHHHHHHCCEEEEECCCCCEEEEECHHHHHHHHHCCCCCCC TIETVPDVLFAEFENAVEAYAGEDASGR CHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PKPIGSYSISDLSRKSGDIIAEALRRPVIITQRNKPRLVLLNIEGYERLMKRSDRRTAG CCCCCCCCCHHHHCCCCHHHHHHHHCCEEEEECCCCCEEEEECHHHHHHHHHCCCCCCC TIETVPDVLFAEFENAVEAYAGEDASGR CHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]