| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895215
Identifier: 190895215
GI number: 190895215
Start: 982425
End: 982907
Strand: Reverse
Name: 190895215
Synonym: RHECIAT_PC0000888
Alternate gene names: NA
Gene position: 982907-982425 (Counterclockwise)
Preceding gene: 190895216
Following gene: 190895214
Centisome position: 90.05
GC content: 57.14
Gene sequence:
>483_bases ATGACAACTGATCAGAACCTCATGCTTTACACCGAGCTTGCCGGCTTTCGGCTCGTCGTCCTGGCAAACCGCTTCGGCTG CGACAGCGAGTTCTCGCGAGAGCTTCACGACCGCCTGATTGAAGGACTCGAAGCGGCGATCGCGCGGATCCAGATCATGA TGGCATTGGAGCGCAGCCTTATCGCAGGCAACGACGAGTTCGCAGCATATCAGTTGGAGGGTGAGACGGAGATTTTCGGG GGCTTCACCATCAATCTGTTGGACGCGCTCGAAATCGATTGCGACACCCATGAATACCGCACCAATGGCGGCGACTGGAT CAATGCCTTGGCGGCGGATTGCAGTGGCGTCGACATCGCCTATCCGAAACTGGTCGCACTGACCGAGGAGGAGCTCAGCT CGTTGACGTCGATCGTCAGGGATATCACGCTGACAACGGGTATCTCTGTTATTGCGGCGCGTGCCGTTCAACTTCGGCGA TAA
Upstream 100 bases:
>100_bases AAAAAATCGGTTCCCCCGCTTGCGAGCCGCGTCCCGCGGTCCCTGACCCCTCTTTGCAACAGAGTGGCCGATCTCCGTCA TCAACGAAGGAGATTACATT
Downstream 100 bases:
>100_bases ACACAACTTCAGCTGCGGGAGGCGGTGGCAGCCGCCTCTCAAGCACAGCGGCAGGGCGAGAATGCAGACGGGAATTCTCT TCCAGCCGAATCCACTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTTDQNLMLYTELAGFRLVVLANRFGCDSEFSRELHDRLIEGLEAAIARIQIMMALERSLIAGNDEFAAYQLEGETEIFG GFTINLLDALEIDCDTHEYRTNGGDWINALAADCSGVDIAYPKLVALTEEELSSLTSIVRDITLTTGISVIAARAVQLRR
Sequences:
>Translated_160_residues MTTDQNLMLYTELAGFRLVVLANRFGCDSEFSRELHDRLIEGLEAAIARIQIMMALERSLIAGNDEFAAYQLEGETEIFG GFTINLLDALEIDCDTHEYRTNGGDWINALAADCSGVDIAYPKLVALTEEELSSLTSIVRDITLTTGISVIAARAVQLRR >Mature_159_residues TTDQNLMLYTELAGFRLVVLANRFGCDSEFSRELHDRLIEGLEAAIARIQIMMALERSLIAGNDEFAAYQLEGETEIFGG FTINLLDALEIDCDTHEYRTNGGDWINALAADCSGVDIAYPKLVALTEEELSSLTSIVRDITLTTGISVIAARAVQLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17663; Mature: 17532
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDQNLMLYTELAGFRLVVLANRFGCDSEFSRELHDRLIEGLEAAIARIQIMMALERSL CCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGNDEFAAYQLEGETEIFGGFTINLLDALEIDCDTHEYRTNGGDWINALAADCSGVDIA HCCCCCEEEEEECCCEEEECCEEEEEEHHEECCCCCCHHCCCCCHHHHHHHHCCCCCEEC YPKLVALTEEELSSLTSIVRDITLTTGISVIAARAVQLRR CCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTDQNLMLYTELAGFRLVVLANRFGCDSEFSRELHDRLIEGLEAAIARIQIMMALERSL CCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGNDEFAAYQLEGETEIFGGFTINLLDALEIDCDTHEYRTNGGDWINALAADCSGVDIA HCCCCCEEEEEECCCEEEECCEEEEEEHHEECCCCCCHHCCCCCHHHHHHHHCCCCCEEC YPKLVALTEEELSSLTSIVRDITLTTGISVIAARAVQLRR CCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA