| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895213
Identifier: 190895213
GI number: 190895213
Start: 981575
End: 981880
Strand: Reverse
Name: 190895213
Synonym: RHECIAT_PC0000886
Alternate gene names: NA
Gene position: 981880-981575 (Counterclockwise)
Preceding gene: 190895214
Following gene: 190895209
Centisome position: 89.96
GC content: 59.8
Gene sequence:
>306_bases GTGGGCATGAGAATACCGCGACCGGACGGTGACCTGGTTCTCTTTTTCCCTTTCACCACCAAGCAGCCGGAGGCGTTGCG GTTTGCCGCGGAAGTGCCGGCGATCGAAAAGCGCCGCGCCGGCCTCGATGCCGATCGCAGGCTTTGGATCATCTTCGATG AGTTCAATACCGACATCGTCGGTAATTCATTTCATCTTGAGCCCGAGCCGCCGCTTGGTCGATTCAGCAAGGCCTTCTTC CTGCCGCTGCTGCGGGAATTCATCAGTCGCCGCAAGCCGGCCAGGGAAGTCAGCCGCTTCCGCTAA
Upstream 100 bases:
>100_bases TACGAGCTGATCGCGACTGCCAGCGTTGTTCGCTATCCTATCTGTGGGCACGTGAGGCTGGGCGTGAGAGACGGAAGGAC GCAAGGATCGGCCGGTCGCC
Downstream 100 bases:
>100_bases TCCTGGTTCGCAAGCCTCACCGCCGGTCGGCCCCTCCAGCTGTCAAGGCACCGGTTTGACGAAGCGGTTCGCCTTGGCAA CCCCATCCATCTCCTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MGMRIPRPDGDLVLFFPFTTKQPEALRFAAEVPAIEKRRAGLDADRRLWIIFDEFNTDIVGNSFHLEPEPPLGRFSKAFF LPLLREFISRRKPAREVSRFR
Sequences:
>Translated_101_residues MGMRIPRPDGDLVLFFPFTTKQPEALRFAAEVPAIEKRRAGLDADRRLWIIFDEFNTDIVGNSFHLEPEPPLGRFSKAFF LPLLREFISRRKPAREVSRFR >Mature_100_residues GMRIPRPDGDLVLFFPFTTKQPEALRFAAEVPAIEKRRAGLDADRRLWIIFDEFNTDIVGNSFHLEPEPPLGRFSKAFFL PLLREFISRRKPAREVSRFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11833; Mature: 11702
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMRIPRPDGDLVLFFPFTTKQPEALRFAAEVPAIEKRRAGLDADRRLWIIFDEFNTDIV CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCC GNSFHLEPEPPLGRFSKAFFLPLLREFISRRKPAREVSRFR CCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCC >Mature Secondary Structure GMRIPRPDGDLVLFFPFTTKQPEALRFAAEVPAIEKRRAGLDADRRLWIIFDEFNTDIV CCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCC GNSFHLEPEPPLGRFSKAFFLPLLREFISRRKPAREVSRFR CCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA