Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

Click here to switch to the map view.

The map label for this gene is 190895214

Identifier: 190895214

GI number: 190895214

Start: 981986

End: 982252

Strand: Reverse

Name: 190895214

Synonym: RHECIAT_PC0000887

Alternate gene names: NA

Gene position: 982252-981986 (Counterclockwise)

Preceding gene: 190895215

Following gene: 190895213

Centisome position: 89.99

GC content: 58.43

Gene sequence:

>267_bases
ATGCCCAAACCAATCGGTTCCTATTCAATCAGCGATCTCTCGCGCAAATCCGGCGATATCATCGCGGAGGCCCTGCGCCG
TCCTGTAATCATCACCCAGCGCAACAAGCCTCGTCTCGTCCTCCTCAATATTGAAGGCTACGAGCGACTGATGAAGCGGT
CTGATCGGCGCACCGCCGGGACTATCGAAACGGTGCCCGATGTACTCTTCGCCGAATTCGAAAACGCCGTCGAGGCCTAT
GCCGGCGAAGACGCATCGGGCCGCTGA

Upstream 100 bases:

>100_bases
AATTCTCTTCCAGCCGAATCCACTGCATCCAAAATGCGGAAACGACAGCATTGTTGAAAATGCTGCATATGGTAACGCCA
TAGCAACAAGGAGGGCGCCC

Downstream 100 bases:

>100_bases
TGAACTACGAGCTGATCGCGACTGCCAGCGTTGTTCGCTATCCTATCTGTGGGCACGTGAGGCTGGGCGTGAGAGACGGA
AGGACGCAAGGATCGGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MPKPIGSYSISDLSRKSGDIIAEALRRPVIITQRNKPRLVLLNIEGYERLMKRSDRRTAGTIETVPDVLFAEFENAVEAY
AGEDASGR

Sequences:

>Translated_88_residues
MPKPIGSYSISDLSRKSGDIIAEALRRPVIITQRNKPRLVLLNIEGYERLMKRSDRRTAGTIETVPDVLFAEFENAVEAY
AGEDASGR
>Mature_87_residues
PKPIGSYSISDLSRKSGDIIAEALRRPVIITQRNKPRLVLLNIEGYERLMKRSDRRTAGTIETVPDVLFAEFENAVEAYA
GEDASGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006442 [H]

Pfam domain/function: PF02604 PhdYeFM [H]

EC number: NA

Molecular weight: Translated: 9821; Mature: 9690

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPIGSYSISDLSRKSGDIIAEALRRPVIITQRNKPRLVLLNIEGYERLMKRSDRRTAG
CCCCCCCCCCHHHHCCCCHHHHHHHHCCEEEEECCCCCEEEEECHHHHHHHHHCCCCCCC
TIETVPDVLFAEFENAVEAYAGEDASGR
CHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PKPIGSYSISDLSRKSGDIIAEALRRPVIITQRNKPRLVLLNIEGYERLMKRSDRRTAG
CCCCCCCCCHHHHCCCCHHHHHHHHCCEEEEECCCCCEEEEECHHHHHHHHHCCCCCCC
TIETVPDVLFAEFENAVEAYAGEDASGR
CHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]