| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895180
Identifier: 190895180
GI number: 190895180
Start: 935835
End: 936383
Strand: Reverse
Name: 190895180
Synonym: RHECIAT_PC0000853
Alternate gene names: NA
Gene position: 936383-935835 (Counterclockwise)
Preceding gene: 190895181
Following gene: 190895179
Centisome position: 85.79
GC content: 52.46
Gene sequence:
>549_bases GTGGTTGTTCGCAACGATGACGACGACGTTCCAGCCCCGGAAAGGCTCGCGAGAATTCACGCGCATTTTCAAGCAACTTC CGCTGATTTTGTATACTCGTTTGCCGAGGGAAAGTCCGAAAGCAATAATTCGACCTGGTCGATCAAAGGACCAATCGAAG GTCAAGAGATTGTCGCGGCGCTTCGAAAAAGGAATTTCATTGTCGCGTCAACCGTTGCATATCGCCGTACCCGAGTGGTT GAGATTGGCGGCTACTGTGAACCTTTTAGATATGCTCAGGATTACGAACTCTATCTTCGCTCCGCCCGCCATGGGCTGAC TTTCTCCTGCATTCCGGAGCAACTCATCCAGCGTCGCTACTCGGCAGACTCTATCACGGTGGCCAAGCGAAAGAAGCAGG CGCTATTTTCATTCGCAGCACGATTAATGGACATATCCGAAGCCGGCACCGTCTCCGACGCGGCACGAGCCATTCTGAAG TACTCCTTCATTCTTCTCACCCCCAATTTTCTCAGGCGCCTTCGAAGGAGTATCGGTCGTGGCAAGTAG
Upstream 100 bases:
>100_bases GCTGGCAGCCACGGACACGCGACTAAAGATACACCTCAATACATCAAACCTTGGGTTGACTAAAAGTCTAAATGTCGGGC TTGGGATTGCGACCGGGGAA
Downstream 100 bases:
>100_bases AAAAAAGATGCTTGTAGTCGGTGCTCGCGGGATTGCGGGGCATGAAGGAGGGGTCGAAAAGTTTGCGGAGGAATTCTGTA AGCGAGCATCCCAGATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MVVRNDDDDVPAPERLARIHAHFQATSADFVYSFAEGKSESNNSTWSIKGPIEGQEIVAALRKRNFIVASTVAYRRTRVV EIGGYCEPFRYAQDYELYLRSARHGLTFSCIPEQLIQRRYSADSITVAKRKKQALFSFAARLMDISEAGTVSDAARAILK YSFILLTPNFLRRLRRSIGRGK
Sequences:
>Translated_182_residues MVVRNDDDDVPAPERLARIHAHFQATSADFVYSFAEGKSESNNSTWSIKGPIEGQEIVAALRKRNFIVASTVAYRRTRVV EIGGYCEPFRYAQDYELYLRSARHGLTFSCIPEQLIQRRYSADSITVAKRKKQALFSFAARLMDISEAGTVSDAARAILK YSFILLTPNFLRRLRRSIGRGK >Mature_182_residues MVVRNDDDDVPAPERLARIHAHFQATSADFVYSFAEGKSESNNSTWSIKGPIEGQEIVAALRKRNFIVASTVAYRRTRVV EIGGYCEPFRYAQDYELYLRSARHGLTFSCIPEQLIQRRYSADSITVAKRKKQALFSFAARLMDISEAGTVSDAARAILK YSFILLTPNFLRRLRRSIGRGK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20657; Mature: 20657
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVRNDDDDVPAPERLARIHAHFQATSADFVYSFAEGKSESNNSTWSIKGPIEGQEIVAA CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH LRKRNFIVASTVAYRRTRVVEIGGYCEPFRYAQDYELYLRSARHGLTFSCIPEQLIQRRY HHHCCEEEEHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHC SADSITVAKRKKQALFSFAARLMDISEAGTVSDAARAILKYSFILLTPNFLRRLRRSIGR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHCC GK CC >Mature Secondary Structure MVVRNDDDDVPAPERLARIHAHFQATSADFVYSFAEGKSESNNSTWSIKGPIEGQEIVAA CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH LRKRNFIVASTVAYRRTRVVEIGGYCEPFRYAQDYELYLRSARHGLTFSCIPEQLIQRRY HHHCCEEEEHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHC SADSITVAKRKKQALFSFAARLMDISEAGTVSDAARAILKYSFILLTPNFLRRLRRSIGR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHCC GK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA