| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895179
Identifier: 190895179
GI number: 190895179
Start: 934739
End: 935845
Strand: Reverse
Name: 190895179
Synonym: RHECIAT_PC0000852
Alternate gene names: NA
Gene position: 935845-934739 (Counterclockwise)
Preceding gene: 190895180
Following gene: 190895178
Centisome position: 85.74
GC content: 52.57
Gene sequence:
>1107_bases GTGGCAAGTAGAAAAAAGATGCTTGTAGTCGGTGCTCGCGGGATTGCGGGGCATGAAGGAGGGGTCGAAAAGTTTGCGGA GGAATTCTGTAAGCGAGCATCCCAGATTATCGACGTAGAGGCTACCTGCCTGAAACACGACGATCGCGCCCACTCGTCCG TAAGGGTTCACGTCACCGGTACATTTGGTTTCGGAAAAACCGACAAAATATTATACTACATGAAGGCAGCTTGGTTGTGC TTAACGGGTCGTTATGACTACATCTTCTTGCTTGGTATAAATTCAGCGGCGCTTGGCTTGATTGCTCGCCTTAACCCCCG TCGGCGCCCGCAGATTGCGGTGCGAAGCGGTTCGATCGATTACCATCTCCCAAAATGGGGCAGGTTGGCCAAGCTTTACT TCCGCTTTTCTGAAACGACCATGCGGTTTGCTGATCACGTTATCGCGGTTTCGCCGAGTATTCAGCGGCACCTCGGTAGA AAGGCGATTGCAGCTACGCTTGTTCGGAATGGCATTACGAAAGACAAAGCTGAGATTGAAACTCAGCGGATTGGCGCTCT AGCCGTTGGTCGTATAACGAGCCAGAAGAACTATTCGGTGTTGGTCGAGGCCGCTAGCGTCTTGGGCTCGACACCGGTCA CGATCGTCGGCGGGCCTGATAAGACAAATGAGTTCGACGTATTATCGTCGGATATCGCACGCCGGGGGCTGGTGAACCTG AGGATGGAAGGTGCTCTCGAGCGGAAGGAGGTGTATGACCGACTTCGCCGAGCCGCGGTTTTTGTCAACTGCTCGATACA CGAGGGTATGTCCAATTCGGTCCTCGAAGCAATACAATACGGTGCGCCGGTGCTGCTTTCGGACATCGACGCCAACCGCG ACCTCCAACTCCCGGATATCCATTACTTCGATCCCAACAATGGCACTCAGCTCGCGGATTTGATCGAGAAAGCCTTACTT GATCCCGAAACGTTTACTGTAAATCGAAATGTATTTCCGGATTGGGATGAAGTTGTTGAAACAATATTGGCGAAGATCGG CGTATCCAACGACCATGATACTCATCGCGCCAACAATGACGAGTCCAGGGATGCGGCCGCCGCTTAA
Upstream 100 bases:
>100_bases GAAGCCGGCACCGTCTCCGACGCGGCACGAGCCATTCTGAAGTACTCCTTCATTCTTCTCACCCCCAATTTTCTCAGGCG CCTTCGAAGGAGTATCGGTC
Downstream 100 bases:
>100_bases GCGTCAGATATATGTCAGGGCCCAAAAGTGCGGTCAAAAATGAGTGACACTCAACCGTTTCCCCCGCGTGTTTTAACCCC AGCCATCGTCGTGGCTGTGA
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase Protein; Capsular Polysaccharide Bisynthesis Glycosyl Transferase; Alpha-D-GlcNAc Alpha-1 2-L-Rhamnosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MASRKKMLVVGARGIAGHEGGVEKFAEEFCKRASQIIDVEATCLKHDDRAHSSVRVHVTGTFGFGKTDKILYYMKAAWLC LTGRYDYIFLLGINSAALGLIARLNPRRRPQIAVRSGSIDYHLPKWGRLAKLYFRFSETTMRFADHVIAVSPSIQRHLGR KAIAATLVRNGITKDKAEIETQRIGALAVGRITSQKNYSVLVEAASVLGSTPVTIVGGPDKTNEFDVLSSDIARRGLVNL RMEGALERKEVYDRLRRAAVFVNCSIHEGMSNSVLEAIQYGAPVLLSDIDANRDLQLPDIHYFDPNNGTQLADLIEKALL DPETFTVNRNVFPDWDEVVETILAKIGVSNDHDTHRANNDESRDAAAA
Sequences:
>Translated_368_residues MASRKKMLVVGARGIAGHEGGVEKFAEEFCKRASQIIDVEATCLKHDDRAHSSVRVHVTGTFGFGKTDKILYYMKAAWLC LTGRYDYIFLLGINSAALGLIARLNPRRRPQIAVRSGSIDYHLPKWGRLAKLYFRFSETTMRFADHVIAVSPSIQRHLGR KAIAATLVRNGITKDKAEIETQRIGALAVGRITSQKNYSVLVEAASVLGSTPVTIVGGPDKTNEFDVLSSDIARRGLVNL RMEGALERKEVYDRLRRAAVFVNCSIHEGMSNSVLEAIQYGAPVLLSDIDANRDLQLPDIHYFDPNNGTQLADLIEKALL DPETFTVNRNVFPDWDEVVETILAKIGVSNDHDTHRANNDESRDAAAA >Mature_367_residues ASRKKMLVVGARGIAGHEGGVEKFAEEFCKRASQIIDVEATCLKHDDRAHSSVRVHVTGTFGFGKTDKILYYMKAAWLCL TGRYDYIFLLGINSAALGLIARLNPRRRPQIAVRSGSIDYHLPKWGRLAKLYFRFSETTMRFADHVIAVSPSIQRHLGRK AIAATLVRNGITKDKAEIETQRIGALAVGRITSQKNYSVLVEAASVLGSTPVTIVGGPDKTNEFDVLSSDIARRGLVNLR MEGALERKEVYDRLRRAAVFVNCSIHEGMSNSVLEAIQYGAPVLLSDIDANRDLQLPDIHYFDPNNGTQLADLIEKALLD PETFTVNRNVFPDWDEVVETILAKIGVSNDHDTHRANNDESRDAAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40732; Mature: 40601
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRKKMLVVGARGIAGHEGGVEKFAEEFCKRASQIIDVEATCLKHDDRAHSSVRVHVTG CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEECCHHHHHCCCCCCCCEEEEEEEE TFGFGKTDKILYYMKAAWLCLTGRYDYIFLLGINSAALGLIARLNPRRRPQIAVRSGSID ECCCCCCHHHHHHHHEEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCCC YHLPKWGRLAKLYFRFSETTMRFADHVIAVSPSIQRHLGRKAIAATLVRNGITKDKAEIE EECCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHH TQRIGALAVGRITSQKNYSVLVEAASVLGSTPVTIVGGPDKTNEFDVLSSDIARRGLVNL HHHHCEEEEECCCCCCCHHHHEEEHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCHHEE RMEGALERKEVYDRLRRAAVFVNCSIHEGMSNSVLEAIQYGAPVLLSDIDANRDLQLPDI EHHCCHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEE HYFDPNNGTQLADLIEKALLDPETFTVNRNVFPDWDEVVETILAKIGVSNDHDTHRANND EEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC ESRDAAAA CCCHHCCC >Mature Secondary Structure ASRKKMLVVGARGIAGHEGGVEKFAEEFCKRASQIIDVEATCLKHDDRAHSSVRVHVTG CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEECCHHHHHCCCCCCCCEEEEEEEE TFGFGKTDKILYYMKAAWLCLTGRYDYIFLLGINSAALGLIARLNPRRRPQIAVRSGSID ECCCCCCHHHHHHHHEEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCCC YHLPKWGRLAKLYFRFSETTMRFADHVIAVSPSIQRHLGRKAIAATLVRNGITKDKAEIE EECCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHH TQRIGALAVGRITSQKNYSVLVEAASVLGSTPVTIVGGPDKTNEFDVLSSDIARRGLVNL HHHHCEEEEECCCCCCCHHHHEEEHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCHHEE RMEGALERKEVYDRLRRAAVFVNCSIHEGMSNSVLEAIQYGAPVLLSDIDANRDLQLPDI EHHCCHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEE HYFDPNNGTQLADLIEKALLDPETFTVNRNVFPDWDEVVETILAKIGVSNDHDTHRANND EEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC ESRDAAAA CCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA