Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is 190895180

Identifier: 190895180

GI number: 190895180

Start: 935835

End: 936383

Strand: Reverse

Name: 190895180

Synonym: RHECIAT_PC0000853

Alternate gene names: NA

Gene position: 936383-935835 (Counterclockwise)

Preceding gene: 190895181

Following gene: 190895179

Centisome position: 85.79

GC content: 52.46

Gene sequence:

>549_bases
GTGGTTGTTCGCAACGATGACGACGACGTTCCAGCCCCGGAAAGGCTCGCGAGAATTCACGCGCATTTTCAAGCAACTTC
CGCTGATTTTGTATACTCGTTTGCCGAGGGAAAGTCCGAAAGCAATAATTCGACCTGGTCGATCAAAGGACCAATCGAAG
GTCAAGAGATTGTCGCGGCGCTTCGAAAAAGGAATTTCATTGTCGCGTCAACCGTTGCATATCGCCGTACCCGAGTGGTT
GAGATTGGCGGCTACTGTGAACCTTTTAGATATGCTCAGGATTACGAACTCTATCTTCGCTCCGCCCGCCATGGGCTGAC
TTTCTCCTGCATTCCGGAGCAACTCATCCAGCGTCGCTACTCGGCAGACTCTATCACGGTGGCCAAGCGAAAGAAGCAGG
CGCTATTTTCATTCGCAGCACGATTAATGGACATATCCGAAGCCGGCACCGTCTCCGACGCGGCACGAGCCATTCTGAAG
TACTCCTTCATTCTTCTCACCCCCAATTTTCTCAGGCGCCTTCGAAGGAGTATCGGTCGTGGCAAGTAG

Upstream 100 bases:

>100_bases
GCTGGCAGCCACGGACACGCGACTAAAGATACACCTCAATACATCAAACCTTGGGTTGACTAAAAGTCTAAATGTCGGGC
TTGGGATTGCGACCGGGGAA

Downstream 100 bases:

>100_bases
AAAAAAGATGCTTGTAGTCGGTGCTCGCGGGATTGCGGGGCATGAAGGAGGGGTCGAAAAGTTTGCGGAGGAATTCTGTA
AGCGAGCATCCCAGATTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MVVRNDDDDVPAPERLARIHAHFQATSADFVYSFAEGKSESNNSTWSIKGPIEGQEIVAALRKRNFIVASTVAYRRTRVV
EIGGYCEPFRYAQDYELYLRSARHGLTFSCIPEQLIQRRYSADSITVAKRKKQALFSFAARLMDISEAGTVSDAARAILK
YSFILLTPNFLRRLRRSIGRGK

Sequences:

>Translated_182_residues
MVVRNDDDDVPAPERLARIHAHFQATSADFVYSFAEGKSESNNSTWSIKGPIEGQEIVAALRKRNFIVASTVAYRRTRVV
EIGGYCEPFRYAQDYELYLRSARHGLTFSCIPEQLIQRRYSADSITVAKRKKQALFSFAARLMDISEAGTVSDAARAILK
YSFILLTPNFLRRLRRSIGRGK
>Mature_182_residues
MVVRNDDDDVPAPERLARIHAHFQATSADFVYSFAEGKSESNNSTWSIKGPIEGQEIVAALRKRNFIVASTVAYRRTRVV
EIGGYCEPFRYAQDYELYLRSARHGLTFSCIPEQLIQRRYSADSITVAKRKKQALFSFAARLMDISEAGTVSDAARAILK
YSFILLTPNFLRRLRRSIGRGK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20657; Mature: 20657

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRNDDDDVPAPERLARIHAHFQATSADFVYSFAEGKSESNNSTWSIKGPIEGQEIVAA
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH
LRKRNFIVASTVAYRRTRVVEIGGYCEPFRYAQDYELYLRSARHGLTFSCIPEQLIQRRY
HHHCCEEEEHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHC
SADSITVAKRKKQALFSFAARLMDISEAGTVSDAARAILKYSFILLTPNFLRRLRRSIGR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHCC
GK
CC
>Mature Secondary Structure
MVVRNDDDDVPAPERLARIHAHFQATSADFVYSFAEGKSESNNSTWSIKGPIEGQEIVAA
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH
LRKRNFIVASTVAYRRTRVVEIGGYCEPFRYAQDYELYLRSARHGLTFSCIPEQLIQRRY
HHHCCEEEEHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHC
SADSITVAKRKKQALFSFAARLMDISEAGTVSDAARAILKYSFILLTPNFLRRLRRSIGR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHCC
GK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA