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The map label for this gene is pssTc

Identifier: 190895174

GI number: 190895174

Start: 927883

End: 929256

Strand: Reverse

Name: pssTc

Synonym: RHECIAT_PC0000847

Alternate gene names: NA

Gene position: 929256-927883 (Counterclockwise)

Preceding gene: 190895175

Following gene: 190895173

Centisome position: 85.13

GC content: 54.08

Gene sequence:

>1374_bases
GTGAAGGTTGTGAGCTCACGCATTTTCGCACATTGGCTTTGTTTTCTCGTGGCGCTCTCGGCATTGGCATATGGGGGTGT
CGCGGAACTCCCTTTCCTATTTCTTGCGTTTCTGACATTCTCAACAAGCACGGCGGCATTTTTCATGATGCCCCGCGGCG
CCGAGACAAGAACGCTTTGGCTTCTATTCATCATCACCTGCACGTTGGCAGCTGCCGCTTATTCACAGTCTCTCGACATC
TCAACGTTCGCGACGCTCGGTTCGCGTTCCGAAAGCTTCGAGGGTATTCGGCAAAAATGGATTTCTGTGTCACCGGGGGC
AACGGATCTCGCAATTTTGCGACTACTTTTACCCGTCGCTATATTCTTTTTGTTCTGTGCGGCCGCATCAACCGGAGATG
ATAGCGCACTCCGCTTGCTGCGGGTGCTCGGCTCGTGGGGCGCTGCAATCGTTATCGCCTCGCTCATTCAGTATTTTGCG
GATCCCCATCATGTCGTGTTGGAAGACAAGCTGCACTATAAGGAGAGTCTCACAGGTCCTTTTGTGAATCGAAACAACGC
GGCGGCGTATCTTGGTCTCGTTTTGCAGGTTCTCCTGGCGCGCATGCTTTATGGGCAGCGTGTAGACCCCTCGGGGAGGT
CCATCTCGAGATGGGTGACGCCCGCCCTATTCGCGCTAGGGGCCTTCGCCCTACTCTTGACTAAATCGAGAGCGGGCATA
GCAGCCGCTATATTTGGTTGTCTGCTGATGACCACATTGCTCCGCGCATATTCTTCCGGACGCCGGGCGCGGCAGACTCA
AGGAGTGCTACATCCTTCATTAGTTACGGCCAGCGTAATTTTTCTGTCTGTCGTGTTGTTTGGTCAAGGAGCGATCGTTC
GCCTGACTACCGAAAAATTTGGGGACAGCCGGCTGTGCACCTACAAATCGGTTTTAACTGGCATCATGGCTGACGCAAAC
TTTTGGGTGGGGACGGGCTTCGGCGCATTTCGCTCCGCGTTTCCCCAGTATCGGAGTGCAGACTGTGGAATAAACGGGGT
GTGGGATCGGGCTCACAACTCTTTTCTAGAGGGAACCTTCGGCCTCGGTGCAATGTTCCTGGTCGTGCTAGTGGGGGTTG
TGTGGATCCTTTGTCGCACCTACGTCAGAGGTTTGAAGTTCCGCAGACGTTTCCGTCCGTTCGCAGCATTAGGGCTAAGC
ACGATGTTTGCGCTCCTTGCCCATTCGTTGGTCGATTTCCCTCTCCAAATACCCGGCATTAACAATCTGTTTGCGGCAGT
CGCGGGAATAGCTTTCGGGATCTCCTGCCGAAATAAAGGCAATATAGGATCGGGCGCGATCTTGAGTCATACACCGCCCG
GACAACACACATAG

Upstream 100 bases:

>100_bases
TTCCCCTGGTGGCTCAGAATCCGGCGTTCTATTCGCACCAAGACGGAGCAGTGACGCGAACAGCAGTCCCCCGGAAACCA
GCTCACATGACGACTCTGCA

Downstream 100 bases:

>100_bases
TCTTGTCGCGTCGACGTTGCGCTGGCGCAACATCTTCAATATAAATCTCGGAGCGCTCGAAAACGGCGAACTAATCTGTT
AAATGATTTGAAGATTTTAA

Product: endo-1,4-beta-xylanase (exopolysaccharide export)

Products: NA

Alternate protein names: O-Antigen Polymerase; Polysaccharide Export Protein; O-Antigen Polymerase Putative Membrane Protein

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKVVSSRIFAHWLCFLVALSALAYGGVAELPFLFLAFLTFSTSTAAFFMMPRGAETRTLWLLFIITCTLAAAAYSQSLDI
STFATLGSRSESFEGIRQKWISVSPGATDLAILRLLLPVAIFFLFCAAASTGDDSALRLLRVLGSWGAAIVIASLIQYFA
DPHHVVLEDKLHYKESLTGPFVNRNNAAAYLGLVLQVLLARMLYGQRVDPSGRSISRWVTPALFALGAFALLLTKSRAGI
AAAIFGCLLMTTLLRAYSSGRRARQTQGVLHPSLVTASVIFLSVVLFGQGAIVRLTTEKFGDSRLCTYKSVLTGIMADAN
FWVGTGFGAFRSAFPQYRSADCGINGVWDRAHNSFLEGTFGLGAMFLVVLVGVVWILCRTYVRGLKFRRRFRPFAALGLS
TMFALLAHSLVDFPLQIPGINNLFAAVAGIAFGISCRNKGNIGSGAILSHTPPGQHT

Sequences:

>Translated_457_residues
MKVVSSRIFAHWLCFLVALSALAYGGVAELPFLFLAFLTFSTSTAAFFMMPRGAETRTLWLLFIITCTLAAAAYSQSLDI
STFATLGSRSESFEGIRQKWISVSPGATDLAILRLLLPVAIFFLFCAAASTGDDSALRLLRVLGSWGAAIVIASLIQYFA
DPHHVVLEDKLHYKESLTGPFVNRNNAAAYLGLVLQVLLARMLYGQRVDPSGRSISRWVTPALFALGAFALLLTKSRAGI
AAAIFGCLLMTTLLRAYSSGRRARQTQGVLHPSLVTASVIFLSVVLFGQGAIVRLTTEKFGDSRLCTYKSVLTGIMADAN
FWVGTGFGAFRSAFPQYRSADCGINGVWDRAHNSFLEGTFGLGAMFLVVLVGVVWILCRTYVRGLKFRRRFRPFAALGLS
TMFALLAHSLVDFPLQIPGINNLFAAVAGIAFGISCRNKGNIGSGAILSHTPPGQHT
>Mature_457_residues
MKVVSSRIFAHWLCFLVALSALAYGGVAELPFLFLAFLTFSTSTAAFFMMPRGAETRTLWLLFIITCTLAAAAYSQSLDI
STFATLGSRSESFEGIRQKWISVSPGATDLAILRLLLPVAIFFLFCAAASTGDDSALRLLRVLGSWGAAIVIASLIQYFA
DPHHVVLEDKLHYKESLTGPFVNRNNAAAYLGLVLQVLLARMLYGQRVDPSGRSISRWVTPALFALGAFALLLTKSRAGI
AAAIFGCLLMTTLLRAYSSGRRARQTQGVLHPSLVTASVIFLSVVLFGQGAIVRLTTEKFGDSRLCTYKSVLTGIMADAN
FWVGTGFGAFRSAFPQYRSADCGINGVWDRAHNSFLEGTFGLGAMFLVVLVGVVWILCRTYVRGLKFRRRFRPFAALGLS
TMFALLAHSLVDFPLQIPGINNLFAAVAGIAFGISCRNKGNIGSGAILSHTPPGQHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49438; Mature: 49438

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVSSRIFAHWLCFLVALSALAYGGVAELPFLFLAFLTFSTSTAAFFMMPRGAETRTLW
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
LLFIITCTLAAAAYSQSLDISTFATLGSRSESFEGIRQKWISVSPGATDLAILRLLLPVA
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
IFFLFCAAASTGDDSALRLLRVLGSWGAAIVIASLIQYFADPHHVVLEDKLHYKESLTGP
HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCC
FVNRNNAAAYLGLVLQVLLARMLYGQRVDPSGRSISRWVTPALFALGAFALLLTKSRAGI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
AAAIFGCLLMTTLLRAYSSGRRARQTQGVLHPSLVTASVIFLSVVLFGQGAIVRLTTEKF
HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHC
GDSRLCTYKSVLTGIMADANFWVGTGFGAFRSAFPQYRSADCGINGVWDRAHNSFLEGTF
CCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
GLGAMFLVVLVGVVWILCRTYVRGLKFRRRFRPFAALGLSTMFALLAHSLVDFPLQIPGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NNLFAAVAGIAFGISCRNKGNIGSGAILSHTPPGQHT
HHHHHHHHHHHHCCEECCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MKVVSSRIFAHWLCFLVALSALAYGGVAELPFLFLAFLTFSTSTAAFFMMPRGAETRTLW
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
LLFIITCTLAAAAYSQSLDISTFATLGSRSESFEGIRQKWISVSPGATDLAILRLLLPVA
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
IFFLFCAAASTGDDSALRLLRVLGSWGAAIVIASLIQYFADPHHVVLEDKLHYKESLTGP
HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCC
FVNRNNAAAYLGLVLQVLLARMLYGQRVDPSGRSISRWVTPALFALGAFALLLTKSRAGI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
AAAIFGCLLMTTLLRAYSSGRRARQTQGVLHPSLVTASVIFLSVVLFGQGAIVRLTTEKF
HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHC
GDSRLCTYKSVLTGIMADANFWVGTGFGAFRSAFPQYRSADCGINGVWDRAHNSFLEGTF
CCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
GLGAMFLVVLVGVVWILCRTYVRGLKFRRRFRPFAALGLSTMFALLAHSLVDFPLQIPGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NNLFAAVAGIAFGISCRNKGNIGSGAILSHTPPGQHT
HHHHHHHHHHHHCCEECCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA