| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is ilvB [H]
Identifier: 190895133
GI number: 190895133
Start: 863494
End: 865296
Strand: Reverse
Name: ilvB [H]
Synonym: RHECIAT_PC0000803
Alternate gene names: 190895133
Gene position: 865296-863494 (Counterclockwise)
Preceding gene: 190895134
Following gene: 190895132
Centisome position: 79.27
GC content: 60.23
Gene sequence:
>1803_bases ATGAAACTCACAGGTGGCCAGGTCGTCGCAAGGGCACTGAAAGAGTATGGCGTTGAATATGTGGCTGGCGTGCCGGGGCA CGGGATCTGGGCGCTTTTCGACGCATTCCTTGAAGAAGGCTCCCAACTTCCGTTCATCCAGGTCATGCACGAGCAGAGCG CCGTTCATATGGCCGATGGATATTTCCGAGCCAGCGGAAAGCCGATGGCTTGCTCGACCTCTGTCGGGCCGGGCGCTGCA AATACCGTCATCGGCCTCGCAACGGCGCTGACTGATTCCACCTCGCTCTTCTACGTATCTGGCTCTCCGCAGACCTACAT GCACGGCCACGGCACCATGCAGGAACTCGAGCGTCATCAGGATAACGCCTTCCCGCGCGTCACCGAGCAGGTTACCAAGC GTGCGTGGCAGGCAAATTCCGTTCAGGTTCTTCCCAGCATCATGCATCGCGCATTCAGCGAGATGCTGACCGGCCGTCCG GGTCCGGTGCACGTCGAAGTGCCTATGGACGTTCAAGTCGAAGCTGCTGACGTCACGATCCATCCGCTCCAAAAGCGGCT TCCGATCGGCATTGCCTACCCGGATCCGCGTGCAATCGAAGCTGCAGTGAAGGTCCTTCTCGCAGCCGAGCGACCTGTCA TTGTCGCTGGCGGCGGTGCTATTTCTGCGAATGCGTCGGAGGAATTGACGCGGCTGGCTGAAAAACTCGGTGCGGCCGTG TCGATCACCTGGAACGGCAAGGGTGCAATCTCTGAAGATCACCAGCTGTTCATCGGGGCCGTCGGCCAGACCGGCACCAC GTGCGGCAATAAAATTACGGCTTCGGCAGACGTCGTCGTCTCGGTCGGTTGTCGCTTCACGGATTGGTCCGCATCCTCCT ATGCCAAGGGCGTCTCGTTCTCGATTCCCTCTGCGAAGCTGATCCACATCGATCTCGATCCACGCGAAATCGGCAAGAAC TACGAGACCGAAGTCGGCATCGTCGCGGACGCCAAGGTCACGCTTGAAGCCATCCTGTCGCTGATTTCCGACGCAGACTC CACAAACATGCTGTCGCGCCGAGAGAATTTCCTGGCTGATGTACAGAAGGCGAAGGCAGATTGGCGCGCCCAGGTCGAGC CGCGTGAGACGAGCCGGGAAACGCCGTTCACGTCGCAGCGCCCCTTGATGGCGCTTCGCAAGGTGCTCGACCGTGACGGC ATCGTCGTCGTCGGCTCGGGGAATACGCAAGGCTCCGTCAAGCAGAGCTTCCCGGTCTACAAGCCTCGCACGCACATCAC GTCCGGCTCCTACTCGCCGATGGGATGGGCGGTGCCTGCAGCGCTCGGCGCGAAACTGGCTTGCCCGGACAAGCAGGTCG TCGCGATCGTCGGAGACGGTGATTTCATGATGTCTCTCCCGGAGATGGGAACGGCAGTCATGAACGGCATCAATGTCGTG TTCCTCGTGCTGAACAATTTCGGATACATGTCCATCCGCGGTGGTCAGCGGAAGTTCATGGGCCGCCACGTCGCTTCCGA GTTCAACCACCATGTCGGCAACGGTGAACCCTATTCTGCCGACATCGCCGCCTCTGCACGCGCATTTGGTCTCGAAGCAT GGAAGGTCGAGAAGGACGAGGACCTCGAAAGCAGCATCAAGGCTGCTTTGGAGTGCGGTGGGCCTGCTCTCGTCGAGGTG ATCGTATCGCGTGACGCCGCTGGCCCGTTCGCCACCGGCTGGTGGGACTTCCCGTCGCCGGCCTATTACGAGAAGGAACA GGCTGCCTACGCAAAGATGCGCGAACTCGAGCAGCATCTATAG
Upstream 100 bases:
>100_bases GCGAGTCCGCCCGATCCGGCCGCAATGTAGTCGCAGTTGGGCGGCTGCGGTCATTACCAGCCCACGACTAAAGAACAACG AACTTTAGAGGGTGAAGAAG
Downstream 100 bases:
>100_bases AGCCAACTTCAGGCTTGGGGCGCCGCCTGGCGCCCCGCCAACCACAGTCTCTCCAAACCCAGAATGCGGGGCACGGCTTC CGCAAACGAAGAGTTATTGT
Product: putative acetolactate synthase, large subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MKLTGGQVVARALKEYGVEYVAGVPGHGIWALFDAFLEEGSQLPFIQVMHEQSAVHMADGYFRASGKPMACSTSVGPGAA NTVIGLATALTDSTSLFYVSGSPQTYMHGHGTMQELERHQDNAFPRVTEQVTKRAWQANSVQVLPSIMHRAFSEMLTGRP GPVHVEVPMDVQVEAADVTIHPLQKRLPIGIAYPDPRAIEAAVKVLLAAERPVIVAGGGAISANASEELTRLAEKLGAAV SITWNGKGAISEDHQLFIGAVGQTGTTCGNKITASADVVVSVGCRFTDWSASSYAKGVSFSIPSAKLIHIDLDPREIGKN YETEVGIVADAKVTLEAILSLISDADSTNMLSRRENFLADVQKAKADWRAQVEPRETSRETPFTSQRPLMALRKVLDRDG IVVVGSGNTQGSVKQSFPVYKPRTHITSGSYSPMGWAVPAALGAKLACPDKQVVAIVGDGDFMMSLPEMGTAVMNGINVV FLVLNNFGYMSIRGGQRKFMGRHVASEFNHHVGNGEPYSADIAASARAFGLEAWKVEKDEDLESSIKAALECGGPALVEV IVSRDAAGPFATGWWDFPSPAYYEKEQAAYAKMRELEQHL
Sequences:
>Translated_600_residues MKLTGGQVVARALKEYGVEYVAGVPGHGIWALFDAFLEEGSQLPFIQVMHEQSAVHMADGYFRASGKPMACSTSVGPGAA NTVIGLATALTDSTSLFYVSGSPQTYMHGHGTMQELERHQDNAFPRVTEQVTKRAWQANSVQVLPSIMHRAFSEMLTGRP GPVHVEVPMDVQVEAADVTIHPLQKRLPIGIAYPDPRAIEAAVKVLLAAERPVIVAGGGAISANASEELTRLAEKLGAAV SITWNGKGAISEDHQLFIGAVGQTGTTCGNKITASADVVVSVGCRFTDWSASSYAKGVSFSIPSAKLIHIDLDPREIGKN YETEVGIVADAKVTLEAILSLISDADSTNMLSRRENFLADVQKAKADWRAQVEPRETSRETPFTSQRPLMALRKVLDRDG IVVVGSGNTQGSVKQSFPVYKPRTHITSGSYSPMGWAVPAALGAKLACPDKQVVAIVGDGDFMMSLPEMGTAVMNGINVV FLVLNNFGYMSIRGGQRKFMGRHVASEFNHHVGNGEPYSADIAASARAFGLEAWKVEKDEDLESSIKAALECGGPALVEV IVSRDAAGPFATGWWDFPSPAYYEKEQAAYAKMRELEQHL >Mature_600_residues MKLTGGQVVARALKEYGVEYVAGVPGHGIWALFDAFLEEGSQLPFIQVMHEQSAVHMADGYFRASGKPMACSTSVGPGAA NTVIGLATALTDSTSLFYVSGSPQTYMHGHGTMQELERHQDNAFPRVTEQVTKRAWQANSVQVLPSIMHRAFSEMLTGRP GPVHVEVPMDVQVEAADVTIHPLQKRLPIGIAYPDPRAIEAAVKVLLAAERPVIVAGGGAISANASEELTRLAEKLGAAV SITWNGKGAISEDHQLFIGAVGQTGTTCGNKITASADVVVSVGCRFTDWSASSYAKGVSFSIPSAKLIHIDLDPREIGKN YETEVGIVADAKVTLEAILSLISDADSTNMLSRRENFLADVQKAKADWRAQVEPRETSRETPFTSQRPLMALRKVLDRDG IVVVGSGNTQGSVKQSFPVYKPRTHITSGSYSPMGWAVPAALGAKLACPDKQVVAIVGDGDFMMSLPEMGTAVMNGINVV FLVLNNFGYMSIRGGQRKFMGRHVASEFNHHVGNGEPYSADIAASARAFGLEAWKVEKDEDLESSIKAALECGGPALVEV IVSRDAAGPFATGWWDFPSPAYYEKEQAAYAKMRELEQHL
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=585, Percent_Identity=24.1025641025641, Blast_Score=149, Evalue=9e-36, Organism=Homo sapiens, GI21361361, Length=616, Percent_Identity=24.3506493506494, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI87081685, Length=562, Percent_Identity=30.9608540925267, Blast_Score=255, Evalue=5e-69, Organism=Escherichia coli, GI1790104, Length=560, Percent_Identity=30.1785714285714, Blast_Score=251, Evalue=6e-68, Organism=Escherichia coli, GI1786717, Length=563, Percent_Identity=31.9715808170515, Blast_Score=249, Evalue=4e-67, Organism=Escherichia coli, GI1787096, Length=571, Percent_Identity=24.1681260945709, Blast_Score=137, Evalue=3e-33, Organism=Escherichia coli, GI1788716, Length=577, Percent_Identity=25.6499133448873, Blast_Score=135, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17531299, Length=503, Percent_Identity=26.2425447316103, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17531301, Length=503, Percent_Identity=26.2425447316103, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI17542570, Length=551, Percent_Identity=22.6860254083485, Blast_Score=101, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6323755, Length=589, Percent_Identity=28.6926994906621, Blast_Score=226, Evalue=7e-60, Organism=Saccharomyces cerevisiae, GI6320816, Length=503, Percent_Identity=25.844930417495, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6323163, Length=566, Percent_Identity=23.4982332155477, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6321524, Length=506, Percent_Identity=23.3201581027668, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323073, Length=502, Percent_Identity=23.9043824701195, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI19922626, Length=577, Percent_Identity=26.3431542461005, Blast_Score=152, Evalue=5e-37,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64448; Mature: 64448
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTGGQVVARALKEYGVEYVAGVPGHGIWALFDAFLEEGSQLPFIQVMHEQSAVHMADG CCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECC YFRASGKPMACSTSVGPGAANTVIGLATALTDSTSLFYVSGSPQTYMHGHGTMQELERHQ EEECCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCHHHHHHHH DNAFPRVTEQVTKRAWQANSVQVLPSIMHRAFSEMLTGRPGPVHVEVPMDVQVEAADVTI CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECEEE HPLQKRLPIGIAYPDPRAIEAAVKVLLAAERPVIVAGGGAISANASEELTRLAEKLGAAV ECHHHCCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHCCCEE SITWNGKGAISEDHQLFIGAVGQTGTTCGNKITASADVVVSVGCRFTDWSASSYAKGVSF EEEECCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEEECCEEECCCCHHHCCCCEE SIPSAKLIHIDLDPREIGKNYETEVGIVADAKVTLEAILSLISDADSTNMLSRRENFLAD ECCCEEEEEEECCHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VQKAKADWRAQVEPRETSRETPFTSQRPLMALRKVLDRDGIVVVGSGNTQGSVKQSFPVY HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCC KPRTHITSGSYSPMGWAVPAALGAKLACPDKQVVAIVGDGDFMMSLPEMGTAVMNGINVV CCCCCCCCCCCCCCCCHHHHHHCCEECCCCCEEEEEEECCCCEEECHHHHHHHHCCCEEE FLVLNNFGYMSIRGGQRKFMGRHVASEFNHHVGNGEPYSADIAASARAFGLEAWKVEKDE EEEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCCCC DLESSIKAALECGGPALVEVIVSRDAAGPFATGWWDFPSPAYYEKEQAAYAKMRELEQHL CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLTGGQVVARALKEYGVEYVAGVPGHGIWALFDAFLEEGSQLPFIQVMHEQSAVHMADG CCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECC YFRASGKPMACSTSVGPGAANTVIGLATALTDSTSLFYVSGSPQTYMHGHGTMQELERHQ EEECCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCHHHHHHHH DNAFPRVTEQVTKRAWQANSVQVLPSIMHRAFSEMLTGRPGPVHVEVPMDVQVEAADVTI CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECEEE HPLQKRLPIGIAYPDPRAIEAAVKVLLAAERPVIVAGGGAISANASEELTRLAEKLGAAV ECHHHCCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHCCCEE SITWNGKGAISEDHQLFIGAVGQTGTTCGNKITASADVVVSVGCRFTDWSASSYAKGVSF EEEECCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEEECCEEECCCCHHHCCCCEE SIPSAKLIHIDLDPREIGKNYETEVGIVADAKVTLEAILSLISDADSTNMLSRRENFLAD ECCCEEEEEEECCHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VQKAKADWRAQVEPRETSRETPFTSQRPLMALRKVLDRDGIVVVGSGNTQGSVKQSFPVY HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCC KPRTHITSGSYSPMGWAVPAALGAKLACPDKQVVAIVGDGDFMMSLPEMGTAVMNGINVV CCCCCCCCCCCCCCCCHHHHHHCCEECCCCCEEEEEEECCCCEEECHHHHHHHHCCCEEE FLVLNNFGYMSIRGGQRKFMGRHVASEFNHHVGNGEPYSADIAASARAFGLEAWKVEKDE EEEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEECCCCC DLESSIKAALECGGPALVEVIVSRDAAGPFATGWWDFPSPAYYEKEQAAYAKMRELEQHL CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9099862 [H]