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The map label for this gene is ugpA [C]

Identifier: 190895130

GI number: 190895130

Start: 859768

End: 860664

Strand: Reverse

Name: ugpA [C]

Synonym: RHECIAT_PC0000800

Alternate gene names: 190895130

Gene position: 860664-859768 (Counterclockwise)

Preceding gene: 190895131

Following gene: 190895129

Centisome position: 78.85

GC content: 57.19

Gene sequence:

>897_bases
ATGAACAGTAGGATTTCTCCGAAAGATAGATTTACGCTCTGGCTGCCCCGGCTGGTCCTCTCCCCAAGTTTGGTGGTGGT
TTTCATTGGCGTCTATCTCTTCATTGCATGGACGGGCTGGATATCCCTGTCGTCGTCCAAAATGGTGCCGCGATACGACT
TCGTCGGGCTGGAGCAATATGTCCGCCTTTGGGCAACGCCCCGCTGGGAGACGGCAGTCGCCAATCTCTTCATTTTCACG
GTGCTGTTCCTGGCAATAACGATCGCGCTCGGCCTATTCCTCGCGATCCTTCTCGACCAGCAGGTTCGGGCCGAGGGCTT
CCTGCGCGCCGTCTACCTCTATCCGATGGCGCTTTCGTTCATCGTTACCGGCACCGCGTGGAAGTGGATCCTCAACCCTG
GACTCGGGGTGCAGAAAGTCGTCAACGAGCTCGGCTGGACCGGCTTTGTCTTCGACTGGATCACGAGGCCGGAATACGCC
ATCTACTGTGTCGTGATTGCGGCGGTCTGGCAATCGACCGGCTTTGCCATGGCAATTTTCCTGGCTGGCCTGCGGGGCAT
CGATAATTCCGTGATCAAGGCCGCGCAAATCGAAGGTGCGGGCCTTGTGCGGATCTACTGGAGCATCATCGTGCCCATGC
TCCGGCCGGCCTTCCTCAGCGTCATCGTTCTTCTGAGCTATATCTCAATCAAAAGTTTCGATCTTGTCCTGGCGCTGACA
AACGGTGGCCCGGGCAGCGCTACCGAAATGCCGTCGACCTTCATGTTTTCCGCGACCTTCAAACGAAATCAGATGGGCAT
TGGTGCGGCGAGCGCCATGATGATGCTGATGACGGTCGCGGCAATCATCGTGCCGTACCTCTATTCCGAACTGAAGGAGA
GCCGCAATGACCACTGA

Upstream 100 bases:

>100_bases
ATCAACAACGCAAAGTGAGCGTCCGTCCGGTTCCAGCCCGCCTAGGCGGGCTGGTTTACCGCACTTCGACGCACATGCGC
CTCAACGCTGGAATGCTGTG

Downstream 100 bases:

>100_bases
GGTTAACAGGGCACGGCGTTCCGCCTTATTCGGGCATATCTTCATCTACGGGTCGCTCATCGCTCTTGCAGCGTTCTATC
TCATGCCGCTGTGGGTGATG

Product: putative sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNSRISPKDRFTLWLPRLVLSPSLVVVFIGVYLFIAWTGWISLSSSKMVPRYDFVGLEQYVRLWATPRWETAVANLFIFT
VLFLAITIALGLFLAILLDQQVRAEGFLRAVYLYPMALSFIVTGTAWKWILNPGLGVQKVVNELGWTGFVFDWITRPEYA
IYCVVIAAVWQSTGFAMAIFLAGLRGIDNSVIKAAQIEGAGLVRIYWSIIVPMLRPAFLSVIVLLSYISIKSFDLVLALT
NGGPGSATEMPSTFMFSATFKRNQMGIGAASAMMMLMTVAAIIVPYLYSELKESRNDH

Sequences:

>Translated_298_residues
MNSRISPKDRFTLWLPRLVLSPSLVVVFIGVYLFIAWTGWISLSSSKMVPRYDFVGLEQYVRLWATPRWETAVANLFIFT
VLFLAITIALGLFLAILLDQQVRAEGFLRAVYLYPMALSFIVTGTAWKWILNPGLGVQKVVNELGWTGFVFDWITRPEYA
IYCVVIAAVWQSTGFAMAIFLAGLRGIDNSVIKAAQIEGAGLVRIYWSIIVPMLRPAFLSVIVLLSYISIKSFDLVLALT
NGGPGSATEMPSTFMFSATFKRNQMGIGAASAMMMLMTVAAIIVPYLYSELKESRNDH
>Mature_298_residues
MNSRISPKDRFTLWLPRLVLSPSLVVVFIGVYLFIAWTGWISLSSSKMVPRYDFVGLEQYVRLWATPRWETAVANLFIFT
VLFLAITIALGLFLAILLDQQVRAEGFLRAVYLYPMALSFIVTGTAWKWILNPGLGVQKVVNELGWTGFVFDWITRPEYA
IYCVVIAAVWQSTGFAMAIFLAGLRGIDNSVIKAAQIEGAGLVRIYWSIIVPMLRPAFLSVIVLLSYISIKSFDLVLALT
NGGPGSATEMPSTFMFSATFKRNQMGIGAASAMMMLMTVAAIIVPYLYSELKESRNDH

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=286, Percent_Identity=28.3216783216783, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787570, Length=236, Percent_Identity=25.4237288135593, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33252; Mature: 33252

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRISPKDRFTLWLPRLVLSPSLVVVFIGVYLFIAWTGWISLSSSKMVPRYDFVGLEQY
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHH
VRLWATPRWETAVANLFIFTVLFLAITIALGLFLAILLDQQVRAEGFLRAVYLYPMALSF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVTGTAWKWILNPGLGVQKVVNELGWTGFVFDWITRPEYAIYCVVIAAVWQSTGFAMAIF
HHHCCHHEEEECCCCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
LAGLRGIDNSVIKAAQIEGAGLVRIYWSIIVPMLRPAFLSVIVLLSYISIKSFDLVLALT
HHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
NGGPGSATEMPSTFMFSATFKRNQMGIGAASAMMMLMTVAAIIVPYLYSELKESRNDH
CCCCCCCCCCCCHHEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSRISPKDRFTLWLPRLVLSPSLVVVFIGVYLFIAWTGWISLSSSKMVPRYDFVGLEQY
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHH
VRLWATPRWETAVANLFIFTVLFLAITIALGLFLAILLDQQVRAEGFLRAVYLYPMALSF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVTGTAWKWILNPGLGVQKVVNELGWTGFVFDWITRPEYAIYCVVIAAVWQSTGFAMAIF
HHHCCHHEEEECCCCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
LAGLRGIDNSVIKAAQIEGAGLVRIYWSIIVPMLRPAFLSVIVLLSYISIKSFDLVLALT
HHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
NGGPGSATEMPSTFMFSATFKRNQMGIGAASAMMMLMTVAAIIVPYLYSELKESRNDH
CCCCCCCCCCCCHHEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]