Click here to switch to the map view.

The map label for this gene is 190895131

Identifier: 190895131

GI number: 190895131

Start: 860747

End: 861997

Strand: Reverse

Name: 190895131

Synonym: RHECIAT_PC0000801

Alternate gene names: NA

Gene position: 861997-860747 (Counterclockwise)

Preceding gene: 190895132

Following gene: 190895130

Centisome position: 78.97

GC content: 58.91

Gene sequence:

>1251_bases
ATGAAACTGAAAATGCTTCTTACCGCTTCGATCTCTCTTCTTCCGATAGCCGCTGTGGCGCAGGAGAAACCCAAGGTCGA
AGGTATTCACCACTGGGTTTCCGAGAGCGAGGTCAAGGCGCTCAAAGTCATTACCGACAAGCTCGCCACCAAGGGCTATA
TTTGGCAGGACAGCGCGGTCGGCGGGCTCTCCGGTGCAAACGCCTTGCAGGCGCTGCGTACCCGACTTGCCGCCGGCAAT
CCGCCGACGACGATGCAATTTCTCGGCTTCGAGGGGCTCGACTGGGCGAACGAAGGTGTCTTGCGTTCGCTGAACGAGCT
CTATGAGAAGAACGGGTGGGAAAAGACCATCTCTCCCCAGTTGGAAGCATTCGTCAAGAACGGCGACGACTACATCTCCG
TGCCGATCAACATGCATCGCCAGAACTGGATCTGGGCCAACAAGGCACTCTTCGACAAGTACGGCATCAGCGAGCCAAAG
AGTTGGGACGAAGTGATCGCAGTTGGCCAAAAGCTCAAAGCTGCGGGTGTCGTCCCTCTGGCGATGGGCGACGAGCCCTG
GCAGATCCTCGAAGTCTTCGAAGCAATCGCGGCAGACATGAACGGGCCGGATTTCTACAAGAAGGCGATTGTCGACCTCG
ACGAGGGCGAATTGTCGAGCGACAAGATGGTCAAGACGTTCGACATGCTGCGCAAGGTTCGCGGCTTGGTCGATGACGGC
TTCACCGGCCGCGACTGGGCGGTTGCCTCCGCAATGGTCGCCGACGGCAAGGCGGGTATGCAGTTGATGGGCGATTGGGC
CAAGGGCGAGTTCCTCAACAAAGGTCTCAAGCCCGGATCCGACTTTCTCTGCTTCCCGACGCCGGCGCAGACACCTTATT
TCAAGTTCGTCATCGACGCCTTCGGCCTCTTCAAGACTGATAGCGAACCGCTTGTCCTCGCGCAGGACGCCTGGGCGGAG
TCCGTCATGGATCCGCAGGTCCAGAAGGACTTTAACAAGGTCAAGGGGTCGATCCCCGCCCGGATCGACATCTCGGTTTC
GGACTTCGACGCCTGCGCACAGCGCAGCTTCGCCGACCGCGATGCAGCCCAGAAGAACGACACGATGCTCGGCGGGTTGA
CGGAAGGCTTCGCCAACCAGCCGCAGTTCACCGGTGTCTTCAGCGATGTGGTCGCGAAGTTCTTCACGACCGACATGTCT
TCCGAGGACGCGGTCAAGGCTCTCGTCGACGGAATCAACAACGCAAAGTGA

Upstream 100 bases:

>100_bases
CGCCGGCCCGCGCGACGCATAAGCAACCGGCGGCTTCGACACCCTCTTGTCGAGACTGCCCGCAATCCACCAACCGCTGA
GGCAAAAAAGGGGAACTACA

Downstream 100 bases:

>100_bases
GCGTCCGTCCGGTTCCAGCCCGCCTAGGCGGGCTGGTTTACCGCACTTCGACGCACATGCGCCTCAACGCTGGAATGCTG
TGATGAACAGTAGGATTTCT

Product: putative sugar ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Immunogenic 39 kDa protein; P39 [H]

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKLKMLLTASISLLPIAAVAQEKPKVEGIHHWVSESEVKALKVITDKLATKGYIWQDSAVGGLSGANALQALRTRLAAGN
PPTTMQFLGFEGLDWANEGVLRSLNELYEKNGWEKTISPQLEAFVKNGDDYISVPINMHRQNWIWANKALFDKYGISEPK
SWDEVIAVGQKLKAAGVVPLAMGDEPWQILEVFEAIAADMNGPDFYKKAIVDLDEGELSSDKMVKTFDMLRKVRGLVDDG
FTGRDWAVASAMVADGKAGMQLMGDWAKGEFLNKGLKPGSDFLCFPTPAQTPYFKFVIDAFGLFKTDSEPLVLAQDAWAE
SVMDPQVQKDFNKVKGSIPARIDISVSDFDACAQRSFADRDAAQKNDTMLGGLTEGFANQPQFTGVFSDVVAKFFTTDMS
SEDAVKALVDGINNAK

Sequences:

>Translated_416_residues
MKLKMLLTASISLLPIAAVAQEKPKVEGIHHWVSESEVKALKVITDKLATKGYIWQDSAVGGLSGANALQALRTRLAAGN
PPTTMQFLGFEGLDWANEGVLRSLNELYEKNGWEKTISPQLEAFVKNGDDYISVPINMHRQNWIWANKALFDKYGISEPK
SWDEVIAVGQKLKAAGVVPLAMGDEPWQILEVFEAIAADMNGPDFYKKAIVDLDEGELSSDKMVKTFDMLRKVRGLVDDG
FTGRDWAVASAMVADGKAGMQLMGDWAKGEFLNKGLKPGSDFLCFPTPAQTPYFKFVIDAFGLFKTDSEPLVLAQDAWAE
SVMDPQVQKDFNKVKGSIPARIDISVSDFDACAQRSFADRDAAQKNDTMLGGLTEGFANQPQFTGVFSDVVAKFFTTDMS
SEDAVKALVDGINNAK
>Mature_416_residues
MKLKMLLTASISLLPIAAVAQEKPKVEGIHHWVSESEVKALKVITDKLATKGYIWQDSAVGGLSGANALQALRTRLAAGN
PPTTMQFLGFEGLDWANEGVLRSLNELYEKNGWEKTISPQLEAFVKNGDDYISVPINMHRQNWIWANKALFDKYGISEPK
SWDEVIAVGQKLKAAGVVPLAMGDEPWQILEVFEAIAADMNGPDFYKKAIVDLDEGELSSDKMVKTFDMLRKVRGLVDDG
FTGRDWAVASAMVADGKAGMQLMGDWAKGEFLNKGLKPGSDFLCFPTPAQTPYFKFVIDAFGLFKTDSEPLVLAQDAWAE
SVMDPQVQKDFNKVKGSIPARIDISVSDFDACAQRSFADRDAAQKNDTMLGGLTEGFANQPQFTGVFSDVVAKFFTTDMS
SEDAVKALVDGINNAK

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45570; Mature: 45570

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKMLLTASISLLPIAAVAQEKPKVEGIHHWVSESEVKALKVITDKLATKGYIWQDSAV
CCEEEEEHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC
GGLSGANALQALRTRLAAGNPPTTMQFLGFEGLDWANEGVLRSLNELYEKNGWEKTISPQ
CCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
LEAFVKNGDDYISVPINMHRQNWIWANKALFDKYGISEPKSWDEVIAVGQKLKAAGVVPL
HHHHHHCCCCEEEECEEECCCCEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEE
AMGDEPWQILEVFEAIAADMNGPDFYKKAIVDLDEGELSSDKMVKTFDMLRKVRGLVDDG
ECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
FTGRDWAVASAMVADGKAGMQLMGDWAKGEFLNKGLKPGSDFLCFPTPAQTPYFKFVIDA
CCCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH
FGLFKTDSEPLVLAQDAWAESVMDPQVQKDFNKVKGSIPARIDISVSDFDACAQRSFADR
HHHHCCCCCCEEEECHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH
DAAQKNDTMLGGLTEGFANQPQFTGVFSDVVAKFFTTDMSSEDAVKALVDGINNAK
HHHHCCCCEECCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLKMLLTASISLLPIAAVAQEKPKVEGIHHWVSESEVKALKVITDKLATKGYIWQDSAV
CCEEEEEHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC
GGLSGANALQALRTRLAAGNPPTTMQFLGFEGLDWANEGVLRSLNELYEKNGWEKTISPQ
CCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
LEAFVKNGDDYISVPINMHRQNWIWANKALFDKYGISEPKSWDEVIAVGQKLKAAGVVPL
HHHHHHCCCCEEEECEEECCCCEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEE
AMGDEPWQILEVFEAIAADMNGPDFYKKAIVDLDEGELSSDKMVKTFDMLRKVRGLVDDG
ECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
FTGRDWAVASAMVADGKAGMQLMGDWAKGEFLNKGLKPGSDFLCFPTPAQTPYFKFVIDA
CCCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH
FGLFKTDSEPLVLAQDAWAESVMDPQVQKDFNKVKGSIPARIDISVSDFDACAQRSFADR
HHHHCCCCCCEEEECHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH
DAAQKNDTMLGGLTEGFANQPQFTGVFSDVVAKFFTTDMSSEDAVKALVDGINNAK
HHHHCCCCEECCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9009303; 10235622 [H]