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The map label for this gene is rbsC [C]

Identifier: 190895093

GI number: 190895093

Start: 817456

End: 818466

Strand: Reverse

Name: rbsC [C]

Synonym: RHECIAT_PC0000762

Alternate gene names: 190895093

Gene position: 818466-817456 (Counterclockwise)

Preceding gene: 190895094

Following gene: 190895092

Centisome position: 74.98

GC content: 61.52

Gene sequence:

>1011_bases
ATGACTGGGACCCGGGCACACATCGCGCCGACCGAGGCGCCGGCAACACAAATCAGACAGAGGGAAAGCCTCTTTAGCGC
CTACAGGACCGAGATTGCGATCGCTCTGGCCATCGTGCTGCTGGCCCTTGCGGTCGGCTCGCAGGTTCCTCAGGCACTCA
CCTGGGGCAACTTCGCCAATATCACCCAGGCCGGTGCGCCTCTTATCATCATATCGCTGGGTGTCCTGCTTGTCGTCATC
ACCGGCGGTATCGACCTATCTGTCGGCTCGGTCTTCTCCTTGACCGGGATGGTGACGGCGCAGGCGATGGCAAATGGATT
TGGCGGCATATCGGCAAGCCTGATGGGTCTCGGCGTCGGACTTGTTTTCGGATCGATCAACGGCTTCCTCGTCACGATCG
CCGGTCTGGCGCCGTTCGTCGTAACCCTCATCACCTTTGCCGTTGCCGGCTCGCTCGCCTTCATCGTCACGAACGGGCGC
TCGATGCCGATCGGCGATCCTGACTTCTGGCTCCTCAACAGCGGCAGCCTGATACCCGGCGTTCCGAATTACATCCTCTT
CTGCGTGGTCCTCCTGATCGCAATCGAGCTCTTCCTGAAGAAGATGGTGGCTGGCCGCTGGTTCTATGCCGTCGGCAGCA
GTTCGACGGCTGCCTATCTGCTTGGCATCCCGGTCAAGCGCACGAAATTCATGGCCTATGTCGCGTCGTCGCTGCTGGCA
TCGTTCTCCGGCCTCCTGACGATCTCCTACATTCTGAACGCGGAATCCACGGCTGGGTCGAGCCTGATGCTCCAAGCCAT
CGCGGCGGTCGTGATCGGCGGAGCAAGCCTGCTCGGCGGCACGGGCACCGCTGTCGGCGCGGTGCTCGGAGCCCTGATGA
TTACCGTCATCCAGAATGGCGTCAATCTTATCGGCATCAACAGCTTTTGGCAGGGGTCGGTCACCGGCGTCGCCATTCTC
ATCGCGGTCCTCATCGACCGCTTCAGCAAGTCGCGGCGGGGGGCCGTTTGA

Upstream 100 bases:

>100_bases
ACCGCGTCATCGCCTTCGACACCGAGGGACGGTGTGCCGGCGTGATGGACCGCGATGACTTCAGTGAAGAGAAACTTGTT
ACTTTGACTGGAATGGCCGC

Downstream 100 bases:

>100_bases
CAACAACCCGGCCCGAGAGCCGGTTTTTGGAGGAGGAATGAAAATGAAAAGCACGAAACACGCAGTAAGGTTGTTTGCCG
GCGTTGCAATGGTGGCCCTT

Product: putative sugar ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTGTRAHIAPTEAPATQIRQRESLFSAYRTEIAIALAIVLLALAVGSQVPQALTWGNFANITQAGAPLIIISLGVLLVVI
TGGIDLSVGSVFSLTGMVTAQAMANGFGGISASLMGLGVGLVFGSINGFLVTIAGLAPFVVTLITFAVAGSLAFIVTNGR
SMPIGDPDFWLLNSGSLIPGVPNYILFCVVLLIAIELFLKKMVAGRWFYAVGSSSTAAYLLGIPVKRTKFMAYVASSLLA
SFSGLLTISYILNAESTAGSSLMLQAIAAVVIGGASLLGGTGTAVGAVLGALMITVIQNGVNLIGINSFWQGSVTGVAIL
IAVLIDRFSKSRRGAV

Sequences:

>Translated_336_residues
MTGTRAHIAPTEAPATQIRQRESLFSAYRTEIAIALAIVLLALAVGSQVPQALTWGNFANITQAGAPLIIISLGVLLVVI
TGGIDLSVGSVFSLTGMVTAQAMANGFGGISASLMGLGVGLVFGSINGFLVTIAGLAPFVVTLITFAVAGSLAFIVTNGR
SMPIGDPDFWLLNSGSLIPGVPNYILFCVVLLIAIELFLKKMVAGRWFYAVGSSSTAAYLLGIPVKRTKFMAYVASSLLA
SFSGLLTISYILNAESTAGSSLMLQAIAAVVIGGASLLGGTGTAVGAVLGALMITVIQNGVNLIGINSFWQGSVTGVAIL
IAVLIDRFSKSRRGAV
>Mature_335_residues
TGTRAHIAPTEAPATQIRQRESLFSAYRTEIAIALAIVLLALAVGSQVPQALTWGNFANITQAGAPLIIISLGVLLVVIT
GGIDLSVGSVFSLTGMVTAQAMANGFGGISASLMGLGVGLVFGSINGFLVTIAGLAPFVVTLITFAVAGSLAFIVTNGRS
MPIGDPDFWLLNSGSLIPGVPNYILFCVVLLIAIELFLKKMVAGRWFYAVGSSSTAAYLLGIPVKRTKFMAYVASSLLAS
FSGLLTISYILNAESTAGSSLMLQAIAAVVIGGASLLGGTGTAVGAVLGALMITVIQNGVNLIGINSFWQGSVTGVAILI
AVLIDRFSKSRRGAV

Specific function: Probably part of the binding-protein-dependent transport system y4mIJK. This system probably transports a sugar. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=315, Percent_Identity=33.6507936507937, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1788896, Length=319, Percent_Identity=32.6018808777429, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1790524, Length=320, Percent_Identity=30.9375, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI145693152, Length=307, Percent_Identity=30.9446254071661, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI145693214, Length=251, Percent_Identity=36.6533864541833, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI87082395, Length=287, Percent_Identity=31.7073170731707, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787794, Length=315, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789992, Length=128, Percent_Identity=40.625, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787793, Length=259, Percent_Identity=30.8880308880309, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788471, Length=283, Percent_Identity=31.4487632508834, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34400; Mature: 34269

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTRAHIAPTEAPATQIRQRESLFSAYRTEIAIALAIVLLALAVGSQVPQALTWGNFAN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC
ITQAGAPLIIISLGVLLVVITGGIDLSVGSVFSLTGMVTAQAMANGFGGISASLMGLGVG
HHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LVFGSINGFLVTIAGLAPFVVTLITFAVAGSLAFIVTNGRSMPIGDPDFWLLNSGSLIPG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCCC
VPNYILFCVVLLIAIELFLKKMVAGRWFYAVGSSSTAAYLLGIPVKRTKFMAYVASSLLA
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHH
SFSGLLTISYILNAESTAGSSLMLQAIAAVVIGGASLLGGTGTAVGAVLGALMITVIQNG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC
VNLIGINSFWQGSVTGVAILIAVLIDRFSKSRRGAV
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TGTRAHIAPTEAPATQIRQRESLFSAYRTEIAIALAIVLLALAVGSQVPQALTWGNFAN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC
ITQAGAPLIIISLGVLLVVITGGIDLSVGSVFSLTGMVTAQAMANGFGGISASLMGLGVG
HHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LVFGSINGFLVTIAGLAPFVVTLITFAVAGSLAFIVTNGRSMPIGDPDFWLLNSGSLIPG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCCC
VPNYILFCVVLLIAIELFLKKMVAGRWFYAVGSSSTAAYLLGIPVKRTKFMAYVASSLLA
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHH
SFSGLLTISYILNAESTAGSSLMLQAIAAVVIGGASLLGGTGTAVGAVLGALMITVIQNG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC
VNLIGINSFWQGSVTGVAILIAVLIDRFSKSRRGAV
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]