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The map label for this gene is rbsB [C]

Identifier: 190895092

GI number: 190895092

Start: 816435

End: 817418

Strand: Reverse

Name: rbsB [C]

Synonym: RHECIAT_PC0000761

Alternate gene names: 190895092

Gene position: 817418-816435 (Counterclockwise)

Preceding gene: 190895093

Following gene: 190895091

Centisome position: 74.89

GC content: 61.08

Gene sequence:

>984_bases
ATGAAAATGAAAAGCACGAAACACGCAGTAAGGTTGTTTGCCGGCGTTGCAATGGTGGCCCTTTCACTTTCGGCTGCCGC
CCATGCTGAGGAAAAGAAGACAGTGGCGTACCTCGCGCCGTCGCTTGACATCTCCTACTGGCAGTGGGTCGGCTACGGCG
TGAAGGAGAAGGCCAAGGAACTCGGCATGGACTATGTCGAGTACACGTCGGAAAATTCGCCGGCCAAGCAGATGGACAAT
GCCCGCACTGCCGTGACCAAGGGCGTCGACGCGATCGTGATCGGCCCCGTGAGCTCGACGAGCACGCCGCCGCTTCTCGC
CTATTTGAAATCGCAGAACATCCCGGTCGCCTTCGCCGGCATCGGCCCGCAGCCCGGCCAAACCGACTATACGTCGTCGG
TGACGGCTAACAACTACGAGACCGGCAAGGCGCAGGGCGAATTCGTCTGCAAGCTTGCCAAGGACCGCGGCGGCAACCAG
GTCGGCATGCTCTCATTGCCGCAGGACCGCGAGAACGCCCAGAAATATCTGAAGGGTGCAGAAGAGGCGTTCAAGGCGAG
CGGCTGCGATCTGGCGCAGATGCTGGAGACCAGGGGCCTTACCGTCAACGAGGCGGTCACGCAGGCCAATGACATGCTCA
CCGCCCATCCTGACATCAAGGCCATTTACGGCATGTATGATGAGGCCGGCACAGGTGCCGCGAAAGTGCTGCAGACCCGC
GGCCTTACCGGCAAGGTCGGCATTGCGGTTGCAGACGGTAGCCCGACGACGATCTCGTTGCTGAAGTCGAACGCCATCCA
GGGCATCTTCTTCCAGGAGGCGGTCGGACAAGGAATCGACGGGACGCAGCAGGTGTTCAACGCAATCTCGGGTGCGCCGG
TCAAGAAAGACCTCGCTCTCGTCATGCCGCTGGTGACGGCCGATAAGGTTGACTCGCCGGAAGCGAAGGCCGTCATCGCA
CGGGTGTTCCCGCCCGCCAACTAA

Upstream 100 bases:

>100_bases
GTCGCCATTCTCATCGCGGTCCTCATCGACCGCTTCAGCAAGTCGCGGCGGGGGGCCGTTTGACAACAACCCGGCCCGAG
AGCCGGTTTTTGGAGGAGGA

Downstream 100 bases:

>100_bases
GGTGATGCGGACGCCGGCTGTTCTGGCCGGCGTCCTCTTCAGCGATCTCTTGAAGGGCAGCAGGCATGAAAGACCTCCCG
ATTATCGATCCGCATTTTCA

Product: putative sugar ABC transporter substrate-binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKMKSTKHAVRLFAGVAMVALSLSAAAHAEEKKTVAYLAPSLDISYWQWVGYGVKEKAKELGMDYVEYTSENSPAKQMDN
ARTAVTKGVDAIVIGPVSSTSTPPLLAYLKSQNIPVAFAGIGPQPGQTDYTSSVTANNYETGKAQGEFVCKLAKDRGGNQ
VGMLSLPQDRENAQKYLKGAEEAFKASGCDLAQMLETRGLTVNEAVTQANDMLTAHPDIKAIYGMYDEAGTGAAKVLQTR
GLTGKVGIAVADGSPTTISLLKSNAIQGIFFQEAVGQGIDGTQQVFNAISGAPVKKDLALVMPLVTADKVDSPEAKAVIA
RVFPPAN

Sequences:

>Translated_327_residues
MKMKSTKHAVRLFAGVAMVALSLSAAAHAEEKKTVAYLAPSLDISYWQWVGYGVKEKAKELGMDYVEYTSENSPAKQMDN
ARTAVTKGVDAIVIGPVSSTSTPPLLAYLKSQNIPVAFAGIGPQPGQTDYTSSVTANNYETGKAQGEFVCKLAKDRGGNQ
VGMLSLPQDRENAQKYLKGAEEAFKASGCDLAQMLETRGLTVNEAVTQANDMLTAHPDIKAIYGMYDEAGTGAAKVLQTR
GLTGKVGIAVADGSPTTISLLKSNAIQGIFFQEAVGQGIDGTQQVFNAISGAPVKKDLALVMPLVTADKVDSPEAKAVIA
RVFPPAN
>Mature_327_residues
MKMKSTKHAVRLFAGVAMVALSLSAAAHAEEKKTVAYLAPSLDISYWQWVGYGVKEKAKELGMDYVEYTSENSPAKQMDN
ARTAVTKGVDAIVIGPVSSTSTPPLLAYLKSQNIPVAFAGIGPQPGQTDYTSSVTANNYETGKAQGEFVCKLAKDRGGNQ
VGMLSLPQDRENAQKYLKGAEEAFKASGCDLAQMLETRGLTVNEAVTQANDMLTAHPDIKAIYGMYDEAGTGAAKVLQTR
GLTGKVGIAVADGSPTTISLLKSNAIQGIFFQEAVGQGIDGTQQVFNAISGAPVKKDLALVMPLVTADKVDSPEAKAVIA
RVFPPAN

Specific function: Probably part of the binding-protein-dependent transport system y4mIJK. This system probably transports a sugar [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790192, Length=250, Percent_Identity=27.6, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34494; Mature: 34494

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKSTKHAVRLFAGVAMVALSLSAAAHAEEKKTVAYLAPSLDISYWQWVGYGVKEKAKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHCCCHHHHHHH
LGMDYVEYTSENSPAKQMDNARTAVTKGVDAIVIGPVSSTSTPPLLAYLKSQNIPVAFAG
HCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEC
IGPQPGQTDYTSSVTANNYETGKAQGEFVCKLAKDRGGNQVGMLSLPQDRENAQKYLKGA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHHCCCCCEEEEEECCCCHHHHHHHHHHH
EEAFKASGCDLAQMLETRGLTVNEAVTQANDMLTAHPDIKAIYGMYDEAGTGAAKVLQTR
HHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCEECCCCHHHHHHCCCCCCCCHHHHHHHC
GLTGKVGIAVADGSPTTISLLKSNAIQGIFFQEAVGQGIDGTQQVFNAISGAPVKKDLAL
CCCCEEEEEEECCCCCEEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH
VMPLVTADKVDSPEAKAVIARVFPPAN
HHHHHHCCCCCCCHHHEEEEECCCCCC
>Mature Secondary Structure
MKMKSTKHAVRLFAGVAMVALSLSAAAHAEEKKTVAYLAPSLDISYWQWVGYGVKEKAKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHCCCHHHHHHH
LGMDYVEYTSENSPAKQMDNARTAVTKGVDAIVIGPVSSTSTPPLLAYLKSQNIPVAFAG
HCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEC
IGPQPGQTDYTSSVTANNYETGKAQGEFVCKLAKDRGGNQVGMLSLPQDRENAQKYLKGA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHHCCCCCEEEEEECCCCHHHHHHHHHHH
EEAFKASGCDLAQMLETRGLTVNEAVTQANDMLTAHPDIKAIYGMYDEAGTGAAKVLQTR
HHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCEECCCCHHHHHHCCCCCCCCHHHHHHHC
GLTGKVGIAVADGSPTTISLLKSNAIQGIFFQEAVGQGIDGTQQVFNAISGAPVKKDLAL
CCCCEEEEEEECCCCCEEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH
VMPLVTADKVDSPEAKAVIARVFPPAN
HHHHHHCCCCCCCHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]