| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895068
Identifier: 190895068
GI number: 190895068
Start: 788243
End: 789337
Strand: Reverse
Name: 190895068
Synonym: RHECIAT_PC0000734
Alternate gene names: NA
Gene position: 789337-788243 (Counterclockwise)
Preceding gene: 190895069
Following gene: 190895065
Centisome position: 72.32
GC content: 61.28
Gene sequence:
>1095_bases ATGAAGTCCATCGACATCATGTATCAGACGATGCTTGCCGAGCTAGGCCAGCGCTCGCTCGACGCCGCTTGGACGGCCGA TTTCCCTCCAGAGGGCCGGTTCACCCCCGCAAACATCAAGGGGCGCAAGTACTGGTACTTCGACATCCCGGATGGACATG GTGGTACGAAACGTCGCTACGTCGGTCCTGCTGACGATCCGGATATATCGCAGCGCGTGGCCGATCATAAGCGGGACAAG GACGATTTACGCGCTCGCAGGCGCTTGGTAAATACCCTGACCCGCGAAGGCGGGATGATCGCCCCCGACGCCATGTCGGG GGACATTGTCGAGGCCCTTGCCGACGGCGGTCTCTTTCGACTCCGAGGCGTTCTCATCGGCACGGTGGCCTTCCAGTGCT ATCCAGGACTGCTCGGTGTCCGCCTTCCCATGGCTGCGATCCTGACCGGCGATGCGGACATCGCCCAAGACTATGCCATC AGCAGGGAGGTTGAAGACAGCCTGCCTCCGATCATTGAACTGCTGCAGGGCGTCGACGCCAGCTTCCGCCCGGTTCCCCA TCGATCAGGATCCGCGGCCTCGTCGGCGTTTCAGAATGCCGACGGCTACAGGGTTGAATTCCTGACGTCGAACCGTGGTT CGGACGACTACCTCGACCAGCCGGCGAAGATGCCCGCCCTCGGCGGTGCCAGCGCGGATCCACTGCGCTTTCTCGACTTC CTCATCAGGGAACCAGTCAGAACAATGCTGCTCCACCGAAGCGGGGTCCCTGTCGTTGTCCCTGATCCGTCCCGGTATGC GGTCCACAAGCTCATCGTCGCCAGCCGCCGACACACTGGCGGACAAGGGCCGGCGAAGCGAGAGAAGGACATACGTCAAG CTGCGCTGCTCTTTGAAGCCCTGCAGCAGACAAGGCGATCTGCCGACTTGGCGCTCGTCTACAACGAAGCATGGGAGCGC GGGTCTGCGTGGCAAGAAGGTATTCGAACAGGGGCGGGAATGCTGCCGGCACAAGATGCCGAGCGGTTCGGGACAGTCCT GATCGAGGGGGCAAAAAAAAACCGCGAAGTAATTGAACTTCCGTTTGGAGGATAG
Upstream 100 bases:
>100_bases GATTCGGCTGCGATGGTGGAGCTTGTCGAGGCGTCTTGTTCCCTTCCCTCCCGACGGTTATACTTTTTTTGAAAAACAGT ATAACGCCGGAGTGGAGCTT
Downstream 100 bases:
>100_bases GTGGTCTTCCGCTTCCAAAGCCAGCCAGTTGATTTAATTCGACGTGGCGGAGACAAATATGGTGCCGAGAGTTCGAGTCC GCTCAAGGCGAAGCATCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKSIDIMYQTMLAELGQRSLDAAWTADFPPEGRFTPANIKGRKYWYFDIPDGHGGTKRRYVGPADDPDISQRVADHKRDK DDLRARRRLVNTLTREGGMIAPDAMSGDIVEALADGGLFRLRGVLIGTVAFQCYPGLLGVRLPMAAILTGDADIAQDYAI SREVEDSLPPIIELLQGVDASFRPVPHRSGSAASSAFQNADGYRVEFLTSNRGSDDYLDQPAKMPALGGASADPLRFLDF LIREPVRTMLLHRSGVPVVVPDPSRYAVHKLIVASRRHTGGQGPAKREKDIRQAALLFEALQQTRRSADLALVYNEAWER GSAWQEGIRTGAGMLPAQDAERFGTVLIEGAKKNREVIELPFGG
Sequences:
>Translated_364_residues MKSIDIMYQTMLAELGQRSLDAAWTADFPPEGRFTPANIKGRKYWYFDIPDGHGGTKRRYVGPADDPDISQRVADHKRDK DDLRARRRLVNTLTREGGMIAPDAMSGDIVEALADGGLFRLRGVLIGTVAFQCYPGLLGVRLPMAAILTGDADIAQDYAI SREVEDSLPPIIELLQGVDASFRPVPHRSGSAASSAFQNADGYRVEFLTSNRGSDDYLDQPAKMPALGGASADPLRFLDF LIREPVRTMLLHRSGVPVVVPDPSRYAVHKLIVASRRHTGGQGPAKREKDIRQAALLFEALQQTRRSADLALVYNEAWER GSAWQEGIRTGAGMLPAQDAERFGTVLIEGAKKNREVIELPFGG >Mature_364_residues MKSIDIMYQTMLAELGQRSLDAAWTADFPPEGRFTPANIKGRKYWYFDIPDGHGGTKRRYVGPADDPDISQRVADHKRDK DDLRARRRLVNTLTREGGMIAPDAMSGDIVEALADGGLFRLRGVLIGTVAFQCYPGLLGVRLPMAAILTGDADIAQDYAI SREVEDSLPPIIELLQGVDASFRPVPHRSGSAASSAFQNADGYRVEFLTSNRGSDDYLDQPAKMPALGGASADPLRFLDF LIREPVRTMLLHRSGVPVVVPDPSRYAVHKLIVASRRHTGGQGPAKREKDIRQAALLFEALQQTRRSADLALVYNEAWER GSAWQEGIRTGAGMLPAQDAERFGTVLIEGAKKNREVIELPFGG
Specific function: Unknown
COG id: COG5397
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39969; Mature: 39969
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIDIMYQTMLAELGQRSLDAAWTADFPPEGRFTPANIKGRKYWYFDIPDGHGGTKRRY CCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC VGPADDPDISQRVADHKRDKDDLRARRRLVNTLTREGGMIAPDAMSGDIVEALADGGLFR CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHCCCHHH LRGVLIGTVAFQCYPGLLGVRLPMAAILTGDADIAQDYAISREVEDSLPPIIELLQGVDA HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCC SFRPVPHRSGSAASSAFQNADGYRVEFLTSNRGSDDYLDQPAKMPALGGASADPLRFLDF CCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHH LIREPVRTMLLHRSGVPVVVPDPSRYAVHKLIVASRRHTGGQGPAKREKDIRQAALLFEA HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LQQTRRSADLALVYNEAWERGSAWQEGIRTGAGMLPAQDAERFGTVLIEGAKKNREVIEL HHHHHHCCCEEEEEHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCCCEEEEC PFGG CCCC >Mature Secondary Structure MKSIDIMYQTMLAELGQRSLDAAWTADFPPEGRFTPANIKGRKYWYFDIPDGHGGTKRRY CCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC VGPADDPDISQRVADHKRDKDDLRARRRLVNTLTREGGMIAPDAMSGDIVEALADGGLFR CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHCCCHHH LRGVLIGTVAFQCYPGLLGVRLPMAAILTGDADIAQDYAISREVEDSLPPIIELLQGVDA HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCC SFRPVPHRSGSAASSAFQNADGYRVEFLTSNRGSDDYLDQPAKMPALGGASADPLRFLDF CCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHH LIREPVRTMLLHRSGVPVVVPDPSRYAVHKLIVASRRHTGGQGPAKREKDIRQAALLFEA HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LQQTRRSADLALVYNEAWERGSAWQEGIRTGAGMLPAQDAERFGTVLIEGAKKNREVIEL HHHHHHCCCEEEEEHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCCCEEEEC PFGG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA