| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895069
Identifier: 190895069
GI number: 190895069
Start: 789549
End: 789932
Strand: Reverse
Name: 190895069
Synonym: RHECIAT_PC0000735
Alternate gene names: NA
Gene position: 789932-789549 (Counterclockwise)
Preceding gene: 190895070
Following gene: 190895068
Centisome position: 72.37
GC content: 55.47
Gene sequence:
>384_bases TTGTTTAGCCCTTTCGCCCGATTCCTAAACGAAACCAATTCTGCCGGATGTATCAGGTCGCTCTCTTTCGTGCTGATCAC CCAGCCGCGAGCATTCAATACCGGCGGATCCCAATGGAGGCTATCTGCAGCGAGTGGCGCAACTTCTTTAAGTCTGCACG CGGGCCGAACAGGAGCTCAACGCGCTTCAGATGACGCGCAATATGCTCGAACGCCTTCGGGAATCGCAGCAACGGGCCGG GCTGGCGGACGAGGGTGGCGTAGATCTCGTCATCGTAGGTACCCATGGGCGGGCGTACTGAATCTTCCTCTGGGCAGCGT GGCATCTCGTATTGTTAACGACATTGAGAACGATGTGTTGTTGGTACTGAGCAGCGTTCATTAA
Upstream 100 bases:
>100_bases CGGCGCGGCAAGTCGGCCCGTGATGGGAGGGTGTCTCTTTTAGGGGCCGTTGCAACATTAACTCTGCCTAGAGTGCCCTC GCTATTATGCCGAAGTATAT
Downstream 100 bases:
>100_bases CCTCCGGCGCGCGACAAGGACGGCAGGTGGAGCGGATGGTGCGCAAGAAGGTTCTCCAACGCTGAAGCGGTCAGCCATTG AACCCGTGAAGGTTCGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MFSPFARFLNETNSAGCIRSLSFVLITQPRAFNTGGSQWRLSAASGATSLSLHAGRTGAQRASDDAQYARTPSGIAATGR AGGRGWRRSRHRRYPWAGVLNLPLGSVASRIVNDIENDVLLVLSSVH
Sequences:
>Translated_127_residues MFSPFARFLNETNSAGCIRSLSFVLITQPRAFNTGGSQWRLSAASGATSLSLHAGRTGAQRASDDAQYARTPSGIAATGR AGGRGWRRSRHRRYPWAGVLNLPLGSVASRIVNDIENDVLLVLSSVH >Mature_127_residues MFSPFARFLNETNSAGCIRSLSFVLITQPRAFNTGGSQWRLSAASGATSLSLHAGRTGAQRASDDAQYARTPSGIAATGR AGGRGWRRSRHRRYPWAGVLNLPLGSVASRIVNDIENDVLLVLSSVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13626; Mature: 13626
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSPFARFLNETNSAGCIRSLSFVLITQPRAFNTGGSQWRLSAASGATSLSLHAGRTGAQ CCCHHHHHHCCCCCCCHHHHCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCC RASDDAQYARTPSGIAATGRAGGRGWRRSRHRRYPWAGVLNLPLGSVASRIVNDIENDVL CCCCCCHHHCCCCCCEECCCCCCCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCCEE LVLSSVH EEEECCC >Mature Secondary Structure MFSPFARFLNETNSAGCIRSLSFVLITQPRAFNTGGSQWRLSAASGATSLSLHAGRTGAQ CCCHHHHHHCCCCCCCHHHHCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCC RASDDAQYARTPSGIAATGRAGGRGWRRSRHRRYPWAGVLNLPLGSVASRIVNDIENDVL CCCCCCHHHCCCCCCEECCCCCCCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCCEE LVLSSVH EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA