| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894931
Identifier: 190894931
GI number: 190894931
Start: 648756
End: 649151
Strand: Reverse
Name: 190894931
Synonym: RHECIAT_PC0000596
Alternate gene names: NA
Gene position: 649151-648756 (Counterclockwise)
Preceding gene: 190894933
Following gene: 190894924
Centisome position: 59.47
GC content: 56.57
Gene sequence:
>396_bases ATGCTGTTCCCGTTATTTCTTCCGACCGAATACGGCGGGAGGTGTTGGTTGCATGATGATGACGTACGTCCCTCTTTGTG GCCACACCTGCTGACATCGCCTTTTCCTCCGCGCTTTCGTCAGGACCTGATGGACGGATCGAAGGGCGAGACCTCGCCGC ATATTAACGAAAATGGGGGGGCAGCGCACCAAGTGGCGGCGTGGCGGACGAGCTTTCTGGCATCGAAAGCTGTTCGACTG AACGAATTCACGACGAGGACGACCCTGGCAGGTGTTGGAAAAGGGAAGCTTTTGAACAGTTTATCGACAACGCCCATCGG TCGGATTTTCCTGGCCGCTCGGCAGGAACTGACAGAACCGGCAGCACTTGGCAAGCCTTGGCGCTGCTGCTTTTAG
Upstream 100 bases:
>100_bases GGCATCAAATGCGCCAAATGCACCACCGAGGGTTTCCACCATGTTGTCGAAGGACGAACCATGGAATCGGAAGGAGAATG GCTTTGCGCTGTTTTCCGTC
Downstream 100 bases:
>100_bases TGGTAATCCGATGATAAAACGATTAGCCAGCCTGCGCAGTCGGCGCGCTCTAATGCCCGCGCAAAAGTCGCCTGCCGAAG GTTCTAAAGTGGACCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLFPLFLPTEYGGRCWLHDDDVRPSLWPHLLTSPFPPRFRQDLMDGSKGETSPHINENGGAAHQVAAWRTSFLASKAVRL NEFTTRTTLAGVGKGKLLNSLSTTPIGRIFLAARQELTEPAALGKPWRCCF
Sequences:
>Translated_131_residues MLFPLFLPTEYGGRCWLHDDDVRPSLWPHLLTSPFPPRFRQDLMDGSKGETSPHINENGGAAHQVAAWRTSFLASKAVRL NEFTTRTTLAGVGKGKLLNSLSTTPIGRIFLAARQELTEPAALGKPWRCCF >Mature_131_residues MLFPLFLPTEYGGRCWLHDDDVRPSLWPHLLTSPFPPRFRQDLMDGSKGETSPHINENGGAAHQVAAWRTSFLASKAVRL NEFTTRTTLAGVGKGKLLNSLSTTPIGRIFLAARQELTEPAALGKPWRCCF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14564; Mature: 14564
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFPLFLPTEYGGRCWLHDDDVRPSLWPHLLTSPFPPRFRQDLMDGSKGETSPHINENGG CCCCEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCC AAHQVAAWRTSFLASKAVRLNEFTTRTTLAGVGKGKLLNSLSTTPIGRIFLAARQELTEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCH AALGKPWRCCF HHCCCCCCCCC >Mature Secondary Structure MLFPLFLPTEYGGRCWLHDDDVRPSLWPHLLTSPFPPRFRQDLMDGSKGETSPHINENGG CCCCEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCC AAHQVAAWRTSFLASKAVRLNEFTTRTTLAGVGKGKLLNSLSTTPIGRIFLAARQELTEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCH AALGKPWRCCF HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA