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The map label for this gene is ugpB [C]

Identifier: 190894836

GI number: 190894836

Start: 545875

End: 547095

Strand: Reverse

Name: ugpB [C]

Synonym: RHECIAT_PC0000501

Alternate gene names: 190894836

Gene position: 547095-545875 (Counterclockwise)

Preceding gene: 190894837

Following gene: 190894835

Centisome position: 50.12

GC content: 61.1

Gene sequence:

>1221_bases
ATGAAGGTTCTGAAGAAAACGCTTTTGCTCGCCGCAATCGGCGGCAGCCTCTTTGCCACAACAGCATCGGCCGAGCAGAT
TAACCTGACCTGGCAGATGTGGACCGGCTCGGATGCTGACACCAGGGGCTGGCAGCACCTGGCCGACATGGTGACCGCCA
AATATCCCGATATCAAGGTAACGCTGACGACGACCGGCTGGGTCGACTACTGGACCCGGCTGCCGGTGCTGGCGGCATCC
GGCCAGCTCGCCGACATCGTTTCCATGCAGTCGCTGCGCATGCCGAATTTCTATTCGCTGCTGGAGCCGCTGAATGACCG
GATCGCCGCCGATAAGTTCGATGTCGGCGCCTTTACGCCCTCGATCATCGGCGGCATGTCCGTCGACAAGCAGCTCTACG
GCCTGCCCTATGACGTCGGTCCATGGGTCATCTATTATAATCAGGACGCGCTCGAAGGGGCCGGTATTCCGCTACCGAAG
CCGGGCTGGACGCTCACCGAATTCACCGATGCCGCCAAGAAGCTGACCAAGGACGGCAAGTACGGCTTCGGCATCACGCC
CCAGAACTATTCGGTGCTGGCCTCGGCCTGGGGCGATAAATATCTCAACGATTCAGGAGAGCTTGACCTTACCAATCCGA
GCGCGATGTCGGCAGCCGACAGGGTGATCGGCTTTGCCGCCAAGGACAAGGTCGCGCCGCTGGTACCGTCGAGCGCCGAT
GCCGGCACGGTGATCCAGGGCCGGTTCTATTCGGGCAATGTCGCCATGTATGTCGACGGCCCGTGGTCGATCATCGGCAT
GAAGGACAAAGTCAAGTTCAAGGTTGGTTCTGCCACACTCCCGCGCGCAGATGGGGAGCTTACGGCCGTCACGGCGGGCT
CGGGTTTCGGCATCGCCACCACGAGCAAGAATAAGGATGCGGCCTGGAAGGCGATCCAGGTGCTGACCAGTCCGGAAGCA
TTGCAATATCTCGCCGAACAGGGCCGCGCGCTGCCGGCACGAACGGCCTCGCAATCCTCCTGGTACAAGGTGGCGGCCAA
GGACATCACCAATGGCGGCGAGGCGATCGACTATTCCCTGGCGCATTCCATCCCCTATGTGATCACCAACAACTGGGCGG
CGGTGGAAAACCTGTTCAACCAGTATTTCCCGCCGGCCTTCGCCGGCAGCACCGACGCCAAGCAGACGATGGAGACCATC
CAGAGCCTCGCGCAGCAATAG

Upstream 100 bases:

>100_bases
CGGCGACCTGACGTTACCGTCCCGGTGATCGAGATCGTCCTGAAGGCGTGAATTCGGTCGCACCCGCGTGTTCATTGCGT
CATGGAGGGAGGAGAAACCC

Downstream 100 bases:

>100_bases
AGCCCGTGCGCCCGAAGGAATGCGCATGCGCCCGCCGTGGCAGGAATTGCCGCGCATGGAGGAAGACATGTCGGAAAGCG
CCGTTGCCGAAATCACCCTG

Product: putative sugar ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKVLKKTLLLAAIGGSLFATTASAEQINLTWQMWTGSDADTRGWQHLADMVTAKYPDIKVTLTTTGWVDYWTRLPVLAAS
GQLADIVSMQSLRMPNFYSLLEPLNDRIAADKFDVGAFTPSIIGGMSVDKQLYGLPYDVGPWVIYYNQDALEGAGIPLPK
PGWTLTEFTDAAKKLTKDGKYGFGITPQNYSVLASAWGDKYLNDSGELDLTNPSAMSAADRVIGFAAKDKVAPLVPSSAD
AGTVIQGRFYSGNVAMYVDGPWSIIGMKDKVKFKVGSATLPRADGELTAVTAGSGFGIATTSKNKDAAWKAIQVLTSPEA
LQYLAEQGRALPARTASQSSWYKVAAKDITNGGEAIDYSLAHSIPYVITNNWAAVENLFNQYFPPAFAGSTDAKQTMETI
QSLAQQ

Sequences:

>Translated_406_residues
MKVLKKTLLLAAIGGSLFATTASAEQINLTWQMWTGSDADTRGWQHLADMVTAKYPDIKVTLTTTGWVDYWTRLPVLAAS
GQLADIVSMQSLRMPNFYSLLEPLNDRIAADKFDVGAFTPSIIGGMSVDKQLYGLPYDVGPWVIYYNQDALEGAGIPLPK
PGWTLTEFTDAAKKLTKDGKYGFGITPQNYSVLASAWGDKYLNDSGELDLTNPSAMSAADRVIGFAAKDKVAPLVPSSAD
AGTVIQGRFYSGNVAMYVDGPWSIIGMKDKVKFKVGSATLPRADGELTAVTAGSGFGIATTSKNKDAAWKAIQVLTSPEA
LQYLAEQGRALPARTASQSSWYKVAAKDITNGGEAIDYSLAHSIPYVITNNWAAVENLFNQYFPPAFAGSTDAKQTMETI
QSLAQQ
>Mature_406_residues
MKVLKKTLLLAAIGGSLFATTASAEQINLTWQMWTGSDADTRGWQHLADMVTAKYPDIKVTLTTTGWVDYWTRLPVLAAS
GQLADIVSMQSLRMPNFYSLLEPLNDRIAADKFDVGAFTPSIIGGMSVDKQLYGLPYDVGPWVIYYNQDALEGAGIPLPK
PGWTLTEFTDAAKKLTKDGKYGFGITPQNYSVLASAWGDKYLNDSGELDLTNPSAMSAADRVIGFAAKDKVAPLVPSSAD
AGTVIQGRFYSGNVAMYVDGPWSIIGMKDKVKFKVGSATLPRADGELTAVTAGSGFGIATTSKNKDAAWKAIQVLTSPEA
LQYLAEQGRALPARTASQSSWYKVAAKDITNGGEAIDYSLAHSIPYVITNNWAAVENLFNQYFPPAFAGSTDAKQTMETI
QSLAQQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 43720; Mature: 43720

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLKKTLLLAAIGGSLFATTASAEQINLTWQMWTGSDADTRGWQHLADMVTAKYPDIKV
CHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEE
TLTTTGWVDYWTRLPVLAASGQLADIVSMQSLRMPNFYSLLEPLNDRIAADKFDVGAFTP
EEEECCHHHHHHHCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCH
SIIGGMSVDKQLYGLPYDVGPWVIYYNQDALEGAGIPLPKPGWTLTEFTDAAKKLTKDGK
HHHCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
YGFGITPQNYSVLASAWGDKYLNDSGELDLTNPSAMSAADRVIGFAAKDKVAPLVPSSAD
CCCCCCCCCCEEEEEHHCCHHCCCCCCEEECCCHHHHHHHHHHEECCCCCCCCCCCCCCC
AGTVIQGRFYSGNVAMYVDGPWSIIGMKDKVKFKVGSATLPRADGELTAVTAGSGFGIAT
CCCEEEEEEEECCEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEE
TSKNKDAAWKAIQVLTSPEALQYLAEQGRALPARTASQSSWYKVAAKDITNGGEAIDYSL
CCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHCCCCCCEEEEHH
AHSIPYVITNNWAAVENLFNQYFPPAFAGSTDAKQTMETIQSLAQQ
HHCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLKKTLLLAAIGGSLFATTASAEQINLTWQMWTGSDADTRGWQHLADMVTAKYPDIKV
CHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEE
TLTTTGWVDYWTRLPVLAASGQLADIVSMQSLRMPNFYSLLEPLNDRIAADKFDVGAFTP
EEEECCHHHHHHHCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCH
SIIGGMSVDKQLYGLPYDVGPWVIYYNQDALEGAGIPLPKPGWTLTEFTDAAKKLTKDGK
HHHCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
YGFGITPQNYSVLASAWGDKYLNDSGELDLTNPSAMSAADRVIGFAAKDKVAPLVPSSAD
CCCCCCCCCCEEEEEHHCCHHCCCCCCEEECCCHHHHHHHHHHEECCCCCCCCCCCCCCC
AGTVIQGRFYSGNVAMYVDGPWSIIGMKDKVKFKVGSATLPRADGELTAVTAGSGFGIAT
CCCEEEEEEEECCEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEE
TSKNKDAAWKAIQVLTSPEALQYLAEQGRALPARTASQSSWYKVAAKDITNGGEAIDYSL
CCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHCCCCCCEEEEHH
AHSIPYVITNNWAAVENLFNQYFPPAFAGSTDAKQTMETIQSLAQQ
HHCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA