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The map label for this gene is 190894837

Identifier: 190894837

GI number: 190894837

Start: 547145

End: 548467

Strand: Reverse

Name: 190894837

Synonym: RHECIAT_PC0000502

Alternate gene names: NA

Gene position: 548467-547145 (Counterclockwise)

Preceding gene: 190894839

Following gene: 190894836

Centisome position: 50.25

GC content: 62.21

Gene sequence:

>1323_bases
GTGACGAGTTCGGAACGCCAGCCGGAAAATCCTGTATCGGGAGGGGCGGGCAAGCACGCCTGGTTCAGCCATGATCGCCT
TGGCATGTTTATCCATTGGGGCCTTTATGCTCTCGGGGCGCGGCATGAGTGGTTGAAGAACCGCGAAGAGCTGAGCGACG
ATCACTACCAGCGCTATTTCGAGAATTTCGATCCGGATCTTTACGATCCCAAGGCCTGGGCGCGCCGTGCCCGGCTCGCC
GGCATGAAATATGTCGTGGTGACGACCAAGCACCACGAAGGCTTCTGCCTGTGGGATAGCAAGGTCACCGATTACAAGGC
GCCGAACACGCCCTGCGGCAAGGATCTGCTGACGCCGCTGGTCGAGGCTTTCCGCGCCGAGGGGCTGAAGATCGGCTTCT
ACTATTCGCTGCTCGACTGGCACCATCCCGATTTTCCGATCGACGTCCACCATCCCCTGCGCAACCATCCCAACGCCGAG
GCGCTGAATTCAGGGCGCAACATCGCCAATTACGCCGCCTATATGCGTGAACAGGTGCGCGAGCTTCTGACCGGCTTCGG
CCGCATCGATATCATCTGGTTCGATTTCAGCTATCCCGGCCGCGAATATCGCGGCCTTCCCGGCAAGGGGCGCGCGGACT
GGGAGAGCGAGCGGCTGATCGAGCTGGTACGCGAGCTGCAGCCCGACATCATCGTCAACAACCGTCTCGACCTACCGCCG
GGCAAGCTGCCCGATGTGACGACGCCGGAACAATATACGCCGCGCGTGGCGCCCGCCATCGCCAGCCAGGGCGTGCTCTG
GGAAGCCTGCCACACCTTCAGCGGCTCCTGGGGTTATCACCGCGACGAGGACAGCTGGAAGAGCCCGGAGCAAATCATCC
AGCTGCTGATCGATTCCGTCGCGCTCGGCGGCAACCTCCTGATGAATGTCGGCCCCACCGGCCGCGGCACATTCGATGCC
CGCGCCATTGCCGCGCTCGAGGTCTATCAGAGCTGGATGGAAGTGAATGGGCGTTCGATCTACGGCGCCGGTCCGTCCGA
ATTTCCGGTGCCGGCCGGCTGCCGCTACACCCAACGCGGCAACCGCCTCTATCTGCATGTCTACAACTGGCCCTACCGCC
ACATTCATATCGAGGGCCTCGCTGACAGGATCGCCTATGCGCAGTTCCTGCACGACGCCAGCGAAGTGCGCTGGCTCAGC
CAGACGAAGGAAGTGGATTCCAATATCGGCGTGATGGTGCCGGAGGGCATGATTACGCTCGAACTGCCGGTCCGGCGACC
TGACGTTACCGTCCCGGTGATCGAGATCGTCCTGAAGGCGTGA

Upstream 100 bases:

>100_bases
TCACGAATTTCGGCTTGACAGGTGCCGGGTCAAGGACGATGTTCAATCGCCGAACCGGTTCGACATGAAGTGGATCCGGA
AAAACAGGGAGGAGAAACCT

Downstream 100 bases:

>100_bases
ATTCGGTCGCACCCGCGTGTTCATTGCGTCATGGAGGGAGGAGAAACCCATGAAGGTTCTGAAGAAAACGCTTTTGCTCG
CCGCAATCGGCGGCAGCCTC

Product: putative alpha-L-fucosidase

Products: L-fucose; alcohol

Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase; Coagulation Factor 5/8 Type Domain Protein; Calx-Beta Domain-Containing Protein; Alpha-L-Fucosidase Protein; Exported Alpha-L-Fucosidase Protein; Alpha-1 3/4-Fucosidase; Lipoprotein; Exporte Hydrolase; Exported Fucosidase; Alpha-L-Fucosidase Family Protein; Alpha-L-Fucosidase-Like Protein; Glycoside Hydrolase Family Alpha-L-Fucosidase; Ig Domain-Containing; Twin-Arginine Translocation Pathway Signal; Fucosidase; Tat Pathway Signal Sequence Domain Protein; Glycosyl Hydrolase Alpha-L-Fucosidase; Exported Hydrolase; Coagulation Factor 5/8 Type Domain-Containing Protein; DS Domain-Containing Protein; Glycoside Hydrolase

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MTSSERQPENPVSGGAGKHAWFSHDRLGMFIHWGLYALGARHEWLKNREELSDDHYQRYFENFDPDLYDPKAWARRARLA
GMKYVVVTTKHHEGFCLWDSKVTDYKAPNTPCGKDLLTPLVEAFRAEGLKIGFYYSLLDWHHPDFPIDVHHPLRNHPNAE
ALNSGRNIANYAAYMREQVRELLTGFGRIDIIWFDFSYPGREYRGLPGKGRADWESERLIELVRELQPDIIVNNRLDLPP
GKLPDVTTPEQYTPRVAPAIASQGVLWEACHTFSGSWGYHRDEDSWKSPEQIIQLLIDSVALGGNLLMNVGPTGRGTFDA
RAIAALEVYQSWMEVNGRSIYGAGPSEFPVPAGCRYTQRGNRLYLHVYNWPYRHIHIEGLADRIAYAQFLHDASEVRWLS
QTKEVDSNIGVMVPEGMITLELPVRRPDVTVPVIEIVLKA

Sequences:

>Translated_440_residues
MTSSERQPENPVSGGAGKHAWFSHDRLGMFIHWGLYALGARHEWLKNREELSDDHYQRYFENFDPDLYDPKAWARRARLA
GMKYVVVTTKHHEGFCLWDSKVTDYKAPNTPCGKDLLTPLVEAFRAEGLKIGFYYSLLDWHHPDFPIDVHHPLRNHPNAE
ALNSGRNIANYAAYMREQVRELLTGFGRIDIIWFDFSYPGREYRGLPGKGRADWESERLIELVRELQPDIIVNNRLDLPP
GKLPDVTTPEQYTPRVAPAIASQGVLWEACHTFSGSWGYHRDEDSWKSPEQIIQLLIDSVALGGNLLMNVGPTGRGTFDA
RAIAALEVYQSWMEVNGRSIYGAGPSEFPVPAGCRYTQRGNRLYLHVYNWPYRHIHIEGLADRIAYAQFLHDASEVRWLS
QTKEVDSNIGVMVPEGMITLELPVRRPDVTVPVIEIVLKA
>Mature_439_residues
TSSERQPENPVSGGAGKHAWFSHDRLGMFIHWGLYALGARHEWLKNREELSDDHYQRYFENFDPDLYDPKAWARRARLAG
MKYVVVTTKHHEGFCLWDSKVTDYKAPNTPCGKDLLTPLVEAFRAEGLKIGFYYSLLDWHHPDFPIDVHHPLRNHPNAEA
LNSGRNIANYAAYMREQVRELLTGFGRIDIIWFDFSYPGREYRGLPGKGRADWESERLIELVRELQPDIIVNNRLDLPPG
KLPDVTTPEQYTPRVAPAIASQGVLWEACHTFSGSWGYHRDEDSWKSPEQIIQLLIDSVALGGNLLMNVGPTGRGTFDAR
AIAALEVYQSWMEVNGRSIYGAGPSEFPVPAGCRYTQRGNRLYLHVYNWPYRHIHIEGLADRIAYAQFLHDASEVRWLSQ
TKEVDSNIGVMVPEGMITLELPVRRPDVTVPVIEIVLKA

Specific function: Unknown

COG id: COG3669

COG function: function code G; Alpha-L-fucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI119360348, Length=381, Percent_Identity=27.2965879265092, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI40068512, Length=353, Percent_Identity=28.6118980169972, Blast_Score=120, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71997700, Length=466, Percent_Identity=23.3905579399142, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24662717, Length=351, Percent_Identity=27.3504273504274, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI78706642, Length=351, Percent_Identity=27.3504273504274, Blast_Score=110, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.51

Molecular weight: Translated: 50277; Mature: 50146

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSERQPENPVSGGAGKHAWFSHDRLGMFIHWGLYALGARHEWLKNREELSDDHYQRYF
CCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
ENFDPDLYDPKAWARRARLAGMKYVVVTTKHHEGFCLWDSKVTDYKAPNTPCGKDLLTPL
HCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHH
VEAFRAEGLKIGFYYSLLDWHHPDFPIDVHHPLRNHPNAEALNSGRNIANYAAYMREQVR
HHHHHHCCEEEEEEEEEHHCCCCCCCEECCCHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
ELLTGFGRIDIIWFDFSYPGREYRGLPGKGRADWESERLIELVRELQPDIIVNNRLDLPP
HHHHCCCCEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
GKLPDVTTPEQYTPRVAPAIASQGVLWEACHTFSGSWGYHRDEDSWKSPEQIIQLLIDSV
CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ALGGNLLMNVGPTGRGTFDARAIAALEVYQSWMEVNGRSIYGAGPSEFPVPAGCRYTQRG
HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEECCC
NRLYLHVYNWPYRHIHIEGLADRIAYAQFLHDASEVRWLSQTKEVDSNIGVMVPEGMITL
CEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEE
ELPVRRPDVTVPVIEIVLKA
EECCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TSSERQPENPVSGGAGKHAWFSHDRLGMFIHWGLYALGARHEWLKNREELSDDHYQRYF
CCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
ENFDPDLYDPKAWARRARLAGMKYVVVTTKHHEGFCLWDSKVTDYKAPNTPCGKDLLTPL
HCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHH
VEAFRAEGLKIGFYYSLLDWHHPDFPIDVHHPLRNHPNAEALNSGRNIANYAAYMREQVR
HHHHHHCCEEEEEEEEEHHCCCCCCCEECCCHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
ELLTGFGRIDIIWFDFSYPGREYRGLPGKGRADWESERLIELVRELQPDIIVNNRLDLPP
HHHHCCCCEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
GKLPDVTTPEQYTPRVAPAIASQGVLWEACHTFSGSWGYHRDEDSWKSPEQIIQLLIDSV
CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ALGGNLLMNVGPTGRGTFDARAIAALEVYQSWMEVNGRSIYGAGPSEFPVPAGCRYTQRG
HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEECCC
NRLYLHVYNWPYRHIHIEGLADRIAYAQFLHDASEVRWLSQTKEVDSNIGVMVPEGMITL
CEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEE
ELPVRRPDVTVPVIEIVLKA
EECCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; alpha-L-fucoside

Specific reaction: H2O + an alpha-L-fucoside = L-fucose + an alcohol

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA