| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is mocBc [H]
Identifier: 190894833
GI number: 190894833
Start: 542878
End: 543807
Strand: Reverse
Name: mocBc [H]
Synonym: RHECIAT_PC0000498
Alternate gene names: 190894833
Gene position: 543807-542878 (Counterclockwise)
Preceding gene: 190894834
Following gene: 190894832
Centisome position: 49.82
GC content: 59.46
Gene sequence:
>930_bases ATGAAAACCGCCACGCTTGCATCCATCGCCTTGGCGATATCGATCTCTGTCGCCAATGCGCAGACGATCGGGGTTTCGAT GACCAATCTCGACAAGTTCAGGCAGATGCTTGTGAACGGCGTCGTCTCGCACGGGAAGACAATATCGGGCCTCAAGCTGG TCACCGCGAATGCCGATGGCGACAACGAGCTGCAGAAGAAACAGGTTCAGCAGTTCGTCGCCGACAAGGTCGATGCCATT ATCGTGATGCTGTCTGATGGCGATGTCGGGCCGCAAATGACCAAGATCGCAGCGGATGCCGGCATTCCGCTGATCTACAT CAACACGACGCCCTCCAATCTCTCGGACTTGCCGGACAATCAGGTTGTTGTCGCCTCCGATGAGAAAGACTCCGGTACGC TGGAGACGAAGCAGGTATGTTCTCTCCTCAAGGGCAGGGGCCGCGTCGTCGTGCTGATGGGCGAGGTCTTCCATGTGGCA GCCCGCACCCGCACCCAGGACATCGCCGATGTCATCGCGACGCCGGAATGCAAAGGTCTTGAGATTGTCGAGCAGCAAGC GGCCTATTGGTCGCGCGATTATGCCGATCAGCAGATGCAGGAATGGCTGGCGGCCGGCGTCAAGTTCGACGCCGTTATCG CCAACAATGACGAGATGGCGCTCGGCGCGATCCGCGCCATGAAGAAGGCCGGCATGCCGATGAAGGATGTCGTCGTCGCC GGGGTCGACGCGACCGACGATGCGCTAGCCGCGATGGTGGCTGGCGATCTCGACGTGACCATTCTCCAGAGCGCGGTCGG GCAGGGCGCGGCTGCGGTCGATGCTGCCATGAAGCTTATCAAAAAGGAGAAGGTGCCCCGCGAAAACAACGTTCCCTTCG AACTCGTCACCCCTGAGAACATTGCCCAATACCTGCCGAAGAGCCAGTGA
Upstream 100 bases:
>100_bases AGAGCTTTTCCGCGCGCTTAACTTTCGCTTCACGTCGAAAAGTAAAATTTAACCAAGATTTGAAATAACGCGTTCACATC CGAATCGCGCAGGGGAATTC
Downstream 100 bases:
>100_bases GCATAAGAGGCCTATGATGTTGCATTTCTGGAATAAATTCGGCATTCGCGCGCAGATCACCGCAGGTTTCGTGCCATTGA TCCTGCTGATGAGCCTGCTG
Product: rhizopine ABC transporter substrate-binding protein
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKTATLASIALAISISVANAQTIGVSMTNLDKFRQMLVNGVVSHGKTISGLKLVTANADGDNELQKKQVQQFVADKVDAI IVMLSDGDVGPQMTKIAADAGIPLIYINTTPSNLSDLPDNQVVVASDEKDSGTLETKQVCSLLKGRGRVVVLMGEVFHVA ARTRTQDIADVIATPECKGLEIVEQQAAYWSRDYADQQMQEWLAAGVKFDAVIANNDEMALGAIRAMKKAGMPMKDVVVA GVDATDDALAAMVAGDLDVTILQSAVGQGAAAVDAAMKLIKKEKVPRENNVPFELVTPENIAQYLPKSQ
Sequences:
>Translated_309_residues MKTATLASIALAISISVANAQTIGVSMTNLDKFRQMLVNGVVSHGKTISGLKLVTANADGDNELQKKQVQQFVADKVDAI IVMLSDGDVGPQMTKIAADAGIPLIYINTTPSNLSDLPDNQVVVASDEKDSGTLETKQVCSLLKGRGRVVVLMGEVFHVA ARTRTQDIADVIATPECKGLEIVEQQAAYWSRDYADQQMQEWLAAGVKFDAVIANNDEMALGAIRAMKKAGMPMKDVVVA GVDATDDALAAMVAGDLDVTILQSAVGQGAAAVDAAMKLIKKEKVPRENNVPFELVTPENIAQYLPKSQ >Mature_309_residues MKTATLASIALAISISVANAQTIGVSMTNLDKFRQMLVNGVVSHGKTISGLKLVTANADGDNELQKKQVQQFVADKVDAI IVMLSDGDVGPQMTKIAADAGIPLIYINTTPSNLSDLPDNQVVVASDEKDSGTLETKQVCSLLKGRGRVVVLMGEVFHVA ARTRTQDIADVIATPECKGLEIVEQQAAYWSRDYADQQMQEWLAAGVKFDAVIANNDEMALGAIRAMKKAGMPMKDVVVA GVDATDDALAAMVAGDLDVTILQSAVGQGAAAVDAAMKLIKKEKVPRENNVPFELVTPENIAQYLPKSQ
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism. Could be involved in its high affinity transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788473, Length=333, Percent_Identity=28.2282282282282, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1790192, Length=305, Percent_Identity=29.8360655737705, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1790674, Length=262, Percent_Identity=27.4809160305344, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 4720 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001761 [H]
Pfam domain/function: PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 32838; Mature: 32838
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTATLASIALAISISVANAQTIGVSMTNLDKFRQMLVNGVVSHGKTISGLKLVTANADG CCCHHHHHEEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCC DNELQKKQVQQFVADKVDAIIVMLSDGDVGPQMTKIAADAGIPLIYINTTPSNLSDLPDN CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCHHCCCCC QVVVASDEKDSGTLETKQVCSLLKGRGRVVVLMGEVFHVAARTRTQDIADVIATPECKGL CEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCH EIVEQQAAYWSRDYADQQMQEWLAAGVKFDAVIANNDEMALGAIRAMKKAGMPMKDVVVA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHEEE GVDATDDALAAMVAGDLDVTILQSAVGQGAAAVDAAMKLIKKEKVPRENNVPFELVTPEN CCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECHHH IAQYLPKSQ HHHHCCCCC >Mature Secondary Structure MKTATLASIALAISISVANAQTIGVSMTNLDKFRQMLVNGVVSHGKTISGLKLVTANADG CCCHHHHHEEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCC DNELQKKQVQQFVADKVDAIIVMLSDGDVGPQMTKIAADAGIPLIYINTTPSNLSDLPDN CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCHHCCCCC QVVVASDEKDSGTLETKQVCSLLKGRGRVVVLMGEVFHVAARTRTQDIADVIATPECKGL CEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCH EIVEQQAAYWSRDYADQQMQEWLAAGVKFDAVIANNDEMALGAIRAMKKAGMPMKDVVVA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHEEE GVDATDDALAAMVAGDLDVTILQSAVGQGAAAVDAAMKLIKKEKVPRENNVPFELVTPEN CCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECHHH IAQYLPKSQ HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]