| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894828
Identifier: 190894828
GI number: 190894828
Start: 535068
End: 537590
Strand: Reverse
Name: 190894828
Synonym: RHECIAT_PC0000493
Alternate gene names: NA
Gene position: 537590-535068 (Counterclockwise)
Preceding gene: 190894832
Following gene: 190894827
Centisome position: 49.25
GC content: 65.76
Gene sequence:
>2523_bases GTGAAAACGGAAAGCATCAAGCAGCCGGACGACACGGCGCCAGCGTACGGCGTGGCCGAGGGGCAGACGATCACGGCATG GGCCGTTTCGGCCCTCATCGAGCGCTATTTTCCCGGCGAGCCGGCTCCGGCCGAAGATCGCGTCAACTACCGCTTCATCA ACGGTTTCGTCGATGTCGGCGACCTGCCGTGCCGCAAGGCCTTCTGGTCCACCATGGTCGGGCGGGCGCTGGAGCCGGAC ACGTGCTGGCCGACTGAAAGCCTCTATCTTCCCGGTTCAAACCGCCGCGTGGAGTTTACCAGTTTCTGGCATGTGCCCAC CCATGTCAGGCGATGGCTGAGGGGCACGTTCAGGACGGATGCCCCGCGCAGGCTCAATCTCGCGCTCAAGACCTGCGGCG GCGTCCGCATCTGGGTCAACGGCCAGGAGGCGTCCCGCTTCGAGCCCTTCAGGCGCAACGTCGAGAGCGCAACCGAGATC GCGCTGACGCTCGAGGCCGGCGACAACGAGGTTCTCGTCCATACCGAAGACCTTGCCGAGCGCGACACGACCTGGTTCTT CGAGCTCGAAATGCTGGACAAGGAGCCGCTCTCGGTGCTGCTGCCGGTAGCGCTGGACCAGAACGAGGTGCGCGAACTGG AAGTTCTGTCGCGCGGCGTGCGCCCGGCCCGAGACGTCTTCGTCAATCAACCGCTAGAGATCGTCTTCGATACCGCGCCC GCGCGCGATCTGCCCGTGGAGCTCAAAGTCGTCGGCCATGGCCACGAGCGGCCGGTTCTCGCCCATTCGAAGCTGACGTT GCGCGCCCGACAGAGCCGCCTGATCGCCGAGGAAGTCTGCGGCATTGCGGACGGTTATCACGGCGTCCACATGACGATCG GCTCCGGGCCGGGTTCGGTCACCCGCGTCATCGATGCCGCCTTCATGAGTAGCCTTTCGCCGTTGCCGGTGGAGACGTCG CTTTCTGCCCGCAAGGGCCAGGCGCTGGAATACAGCGCCCGCTTTGGCGCCAATCGCGCCGGGCGCCTCATCGCGATGAT GGAAACCGGCCATCACGACCCGAAAAGCTTCGATCGTATCGTTGACGCGACGCTTGCCTCGATCGATGCGCGCGAGGATT GCTCGGACTTCATCATGGTGCCGCTCCTCTGGCTGCTCGGCGCCTATGGCGACCGGATGCCCGAGGCCATCGTCGAACGC ATCCGCCGTTCCGTTCTCTCTTATCGCTACTGGGTCGACGAGCCGGGCAATGACGCGATGTGGTTCTGGAGCGAGAACCA TGTGCTCTGCTTCCATACCAGCCAGCTGCTGGCCGGGCTTCTTCTGCCCGACGCGGTGTTCTCGGCCTCCGGGCGGACGG GACGACAGCAGGCGGAACTCGCCGTCGAGCGGCTCGGCCGCTGGTTCGACAGCGTCGAGGCCCACGGCCTGGCGGAATGG AATTCGGCCGCCTATTACCCGATCGATTTCATCGGTCTGCTCGCGCTGGAGCGATGGGCGGAGCGCGGGATCGCCGATCG CGCCCGCGGCCAGATCGATCTCATCTTCCGCATGATCGCCCTTCACACGCTTGCCGGCGTACCGGCCGGCTCGCAGGGCC GCGCCTACGACAAGGAGCTGCGCGCCGGACCGCTGACCGAGCTTGCACCCTTTGCCCAGGTCGCCTTTGGCACCGGCTGG CTCAACAACGGCGTGGCGGCGCTGACGATGTTCTGTGCCGGCAGCTATGAGCCGCCCGCCGATCTGACCGAGCTTGCCGC CCTTCCCAGGGGCAGAAGCGTCGAGGCGCGTTACAGCCAGGGGCTCGAGAGCGGAAAGCTCGTGCTGTTCAAGAACGAGG CGGCGCAGCTTTCGACGGTGGTCGATCACAAGACCGGCCGGAAGGGTCACCAGCAGCACGTGCTCGACATCAGGCTGGCC GGCCATCCGATGGCGCGACTCTGGGTCAACCATCCCGGCGAGGACGATCCCTGGGGCAATCAACGGCCGTCCTATTGGGC CGGCAACGGCATCCTGCCGCGTGTCGCCCAGCATCGCGATGTCGCCCTGCTGATCGAGGACACAAGCGACGCGCGGCATG CGTGGACGCATGCCTATATCGGCCGCGATGGCCTCGACGATCTCATCGTCGAAGACAAGTGGCTGATCGCCCGATCGGGC AGGGGCTTTGCCGCCCTCTGGGCCTCAAACGGCCTGGAATTGATCACCGAAGGGCCGACCGCCGGCCGCGAGGCGCGCTC CTACGGGTCGCTCTGCGGCTGGGCAGCTATCGTGGGAAGCGGGAATAGCGATGCCTTCAAGGCCTTCCTCGAACGTTTAC GCCAGACAAAGGTTGCCTTCGATCCCGCGCTTCGGCAGCTCGTCCTGACTCCGCCGGGCGGTCCGGCGCTCTCCCTTTCT TATGCCGATGGTCTTTCGATAGCCGGCAAGCCACGGCCGTTCACCCATGATCAGCCGCACCCGATCCTCACCCACGACAG CGCGGCCTCCGGCTCAGCCGCTGACGGGCCGTTTTACTCCTGA
Upstream 100 bases:
>100_bases TTTTCTACACGAATAGCGATGTTTTTGAGCGATTTTCAAAAATCACGCACCCAAATAGCCTAATGAAAATATTTTCATAG GATTGCGGAGGAGGCGATCT
Downstream 100 bases:
>100_bases GAATATAGGATTTCAGCATGAACACAGCATCTGTCGACAACGGCGCTCTCCTGACGACCATCGATCGCGTGGCGACGGCC TTCAGCCGCCTCAGGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 840; Mature: 840
Protein sequence:
>840_residues MKTESIKQPDDTAPAYGVAEGQTITAWAVSALIERYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWSTMVGRALEPD TCWPTESLYLPGSNRRVEFTSFWHVPTHVRRWLRGTFRTDAPRRLNLALKTCGGVRIWVNGQEASRFEPFRRNVESATEI ALTLEAGDNEVLVHTEDLAERDTTWFFELEMLDKEPLSVLLPVALDQNEVRELEVLSRGVRPARDVFVNQPLEIVFDTAP ARDLPVELKVVGHGHERPVLAHSKLTLRARQSRLIAEEVCGIADGYHGVHMTIGSGPGSVTRVIDAAFMSSLSPLPVETS LSARKGQALEYSARFGANRAGRLIAMMETGHHDPKSFDRIVDATLASIDAREDCSDFIMVPLLWLLGAYGDRMPEAIVER IRRSVLSYRYWVDEPGNDAMWFWSENHVLCFHTSQLLAGLLLPDAVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEW NSAAYYPIDFIGLLALERWAERGIADRARGQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPFAQVAFGTGW LNNGVAALTMFCAGSYEPPADLTELAALPRGRSVEARYSQGLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLA GHPMARLWVNHPGEDDPWGNQRPSYWAGNGILPRVAQHRDVALLIEDTSDARHAWTHAYIGRDGLDDLIVEDKWLIARSG RGFAALWASNGLELITEGPTAGREARSYGSLCGWAAIVGSGNSDAFKAFLERLRQTKVAFDPALRQLVLTPPGGPALSLS YADGLSIAGKPRPFTHDQPHPILTHDSAASGSAADGPFYS
Sequences:
>Translated_840_residues MKTESIKQPDDTAPAYGVAEGQTITAWAVSALIERYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWSTMVGRALEPD TCWPTESLYLPGSNRRVEFTSFWHVPTHVRRWLRGTFRTDAPRRLNLALKTCGGVRIWVNGQEASRFEPFRRNVESATEI ALTLEAGDNEVLVHTEDLAERDTTWFFELEMLDKEPLSVLLPVALDQNEVRELEVLSRGVRPARDVFVNQPLEIVFDTAP ARDLPVELKVVGHGHERPVLAHSKLTLRARQSRLIAEEVCGIADGYHGVHMTIGSGPGSVTRVIDAAFMSSLSPLPVETS LSARKGQALEYSARFGANRAGRLIAMMETGHHDPKSFDRIVDATLASIDAREDCSDFIMVPLLWLLGAYGDRMPEAIVER IRRSVLSYRYWVDEPGNDAMWFWSENHVLCFHTSQLLAGLLLPDAVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEW NSAAYYPIDFIGLLALERWAERGIADRARGQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPFAQVAFGTGW LNNGVAALTMFCAGSYEPPADLTELAALPRGRSVEARYSQGLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLA GHPMARLWVNHPGEDDPWGNQRPSYWAGNGILPRVAQHRDVALLIEDTSDARHAWTHAYIGRDGLDDLIVEDKWLIARSG RGFAALWASNGLELITEGPTAGREARSYGSLCGWAAIVGSGNSDAFKAFLERLRQTKVAFDPALRQLVLTPPGGPALSLS YADGLSIAGKPRPFTHDQPHPILTHDSAASGSAADGPFYS >Mature_840_residues MKTESIKQPDDTAPAYGVAEGQTITAWAVSALIERYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWSTMVGRALEPD TCWPTESLYLPGSNRRVEFTSFWHVPTHVRRWLRGTFRTDAPRRLNLALKTCGGVRIWVNGQEASRFEPFRRNVESATEI ALTLEAGDNEVLVHTEDLAERDTTWFFELEMLDKEPLSVLLPVALDQNEVRELEVLSRGVRPARDVFVNQPLEIVFDTAP ARDLPVELKVVGHGHERPVLAHSKLTLRARQSRLIAEEVCGIADGYHGVHMTIGSGPGSVTRVIDAAFMSSLSPLPVETS LSARKGQALEYSARFGANRAGRLIAMMETGHHDPKSFDRIVDATLASIDAREDCSDFIMVPLLWLLGAYGDRMPEAIVER IRRSVLSYRYWVDEPGNDAMWFWSENHVLCFHTSQLLAGLLLPDAVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEW NSAAYYPIDFIGLLALERWAERGIADRARGQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPFAQVAFGTGW LNNGVAALTMFCAGSYEPPADLTELAALPRGRSVEARYSQGLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLA GHPMARLWVNHPGEDDPWGNQRPSYWAGNGILPRVAQHRDVALLIEDTSDARHAWTHAYIGRDGLDDLIVEDKWLIARSG RGFAALWASNGLELITEGPTAGREARSYGSLCGWAAIVGSGNSDAFKAFLERLRQTKVAFDPALRQLVLTPPGGPALSLS YADGLSIAGKPRPFTHDQPHPILTHDSAASGSAADGPFYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92638; Mature: 92638
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTESIKQPDDTAPAYGVAEGQTITAWAVSALIERYFPGEPAPAEDRVNYRFINGFVDVG CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECEEECC DLPCRKAFWSTMVGRALEPDTCWPTESLYLPGSNRRVEFTSFWHVPTHVRRWLRGTFRTD CCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHCCCC APRRLNLALKTCGGVRIWVNGQEASRFEPFRRNVESATEIALTLEAGDNEVLVHTEDLAE CCCEEEEEEECCCCEEEEECCCCCCCCCHHHHCHHCCEEEEEEEECCCCEEEEEEHHHHC RDTTWFFELEMLDKEPLSVLLPVALDQNEVRELEVLSRGVRPARDVFVNQPLEIVFDTAP CCCEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCC ARDLPVELKVVGHGHERPVLAHSKLTLRARQSRLIAEEVCGIADGYHGVHMTIGSGPGSV CCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH TRVIDAAFMSSLSPLPVETSLSARKGQALEYSARFGANRAGRLIAMMETGHHDPKSFDRI HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHH VDATLASIDAREDCSDFIMVPLLWLLGAYGDRMPEAIVERIRRSVLSYRYWVDEPGNDAM HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCCEE WFWSENHVLCFHTSQLLAGLLLPDAVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEW EEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC NSAAYYPIDFIGLLALERWAERGIADRARGQIDLIFRMIALHTLAGVPAGSQGRAYDKEL CCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH RAGPLTELAPFAQVAFGTGWLNNGVAALTMFCAGSYEPPADLTELAALPRGRSVEARYSQ CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHC GLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLAGHPMARLWVNHPGEDDPWGN CCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC QRPSYWAGNGILPRVAQHRDVALLIEDTSDARHAWTHAYIGRDGLDDLIVEDKWLIARSG CCCCCCCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHCCCCEEEEECC RGFAALWASNGLELITEGPTAGREARSYGSLCGWAAIVGSGNSDAFKAFLERLRQTKVAF CCEEEEEECCCCEEEECCCCCCHHHHHHCCHHHEHHEECCCCCHHHHHHHHHHHHHHHHH DPALRQLVLTPPGGPALSLSYADGLSIAGKPRPFTHDQPHPILTHDSAASGSAADGPFYS CHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKTESIKQPDDTAPAYGVAEGQTITAWAVSALIERYFPGEPAPAEDRVNYRFINGFVDVG CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECEEECC DLPCRKAFWSTMVGRALEPDTCWPTESLYLPGSNRRVEFTSFWHVPTHVRRWLRGTFRTD CCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHCCCC APRRLNLALKTCGGVRIWVNGQEASRFEPFRRNVESATEIALTLEAGDNEVLVHTEDLAE CCCEEEEEEECCCCEEEEECCCCCCCCCHHHHCHHCCEEEEEEEECCCCEEEEEEHHHHC RDTTWFFELEMLDKEPLSVLLPVALDQNEVRELEVLSRGVRPARDVFVNQPLEIVFDTAP CCCEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCC ARDLPVELKVVGHGHERPVLAHSKLTLRARQSRLIAEEVCGIADGYHGVHMTIGSGPGSV CCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH TRVIDAAFMSSLSPLPVETSLSARKGQALEYSARFGANRAGRLIAMMETGHHDPKSFDRI HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHH VDATLASIDAREDCSDFIMVPLLWLLGAYGDRMPEAIVERIRRSVLSYRYWVDEPGNDAM HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCCEE WFWSENHVLCFHTSQLLAGLLLPDAVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEW EEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC NSAAYYPIDFIGLLALERWAERGIADRARGQIDLIFRMIALHTLAGVPAGSQGRAYDKEL CCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH RAGPLTELAPFAQVAFGTGWLNNGVAALTMFCAGSYEPPADLTELAALPRGRSVEARYSQ CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHC GLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLAGHPMARLWVNHPGEDDPWGN CCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC QRPSYWAGNGILPRVAQHRDVALLIEDTSDARHAWTHAYIGRDGLDDLIVEDKWLIARSG CCCCCCCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHCCCCEEEEECC RGFAALWASNGLELITEGPTAGREARSYGSLCGWAAIVGSGNSDAFKAFLERLRQTKVAF CCEEEEEECCCCEEEECCCCCCHHHHHHCCHHHEHHEECCCCCHHHHHHHHHHHHHHHHH DPALRQLVLTPPGGPALSLSYADGLSIAGKPRPFTHDQPHPILTHDSAASGSAADGPFYS CHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA