| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is zraS [C]
Identifier: 190894792
GI number: 190894792
Start: 484783
End: 486456
Strand: Reverse
Name: zraS [C]
Synonym: RHECIAT_PC0000457
Alternate gene names: 190894792
Gene position: 486456-484783 (Counterclockwise)
Preceding gene: 190894793
Following gene: 190894791
Centisome position: 44.57
GC content: 64.81
Gene sequence:
>1674_bases ATGAACCCCGTCAACATCCTCCTCGTCGACGACCAGCCCGCCAAACTCCTGAGCTACGAGGTCATTCTCGAAGAGCTTGA GGAGAACCTCATCAAGGCGCAGTCGGCCCGCGAAGCCTTCGAGCACCTGCTGCGCACTGAAATCGCCGTCATCCTGGTAG ATGTCTGCATGCCGGAACAGGATGGTTTCGAGCTCGTTAGCATGATCCGGCAACACCCGCGCTATCAGAACACGCCGATC ATCTTCGTCTCGGCCGTCATGCTGGCCGAACCGGACCGGCTGCGCGGCTATGCGGTCGGTGCCGTCGACTACGTCTCCGT CCCGATCGTGCCCGAGGTGCTGAGGGCCAAGGTCCGGGTCTTTGCCGATCTCTACAGAAAGACGCGGGAGCTCGAGCGGC TGAACGCCGATCTGGAAGCTAGGGTGCACCAGCGCACCGCCGAGCTCGAGGCTTCTGCCATCCAGTTGCGTCAACTGAAC GAGGAGCTCGAGCAGCGGATCGACCAGCGGACGCGCGAGCGTGAGGAGGCGCTGGCGCAGCTTTTCGAAGCGCAGAAGCT CGACACGATCGGTCACCTCACCGGCGGCGTGGCGCACGATTTCAACAATCTTCTCATGGCAGTGCTCGGCAGCCTCAGCC TGCTGAAGAAGCGGCTGCCGGCGGACGAGCGCAGCGAACGCCTGGTGACGAATGCCATCCAGGCGGCCGAGCGCGGCACG GCGCTCACCCAGCGCCTGCTCGCCTTCGCGCGGCGCCAGGAACTGAAGCCGCAGGCAGTCGACTTCCTCAGGCTGTTTGA AAATATCGAGGATCTGCTCGCCAAGGCGGTGGGACCGCGCGTCGAGATCCGAAAGTGCATCCCGGCGGATCTGCCGCCGC TCTTGGTCGACAGCAATCAGCTGGAGCTGGCGCTGCTCAACCTCTTCGTCAATGCACGCGATGCGCTCGAAAGCGGCGGT GCGGTGACGGTCGCGGCGGCTGCGGAGGAGGCACGGCCGACCGGCCTTGCGGGCGGAAATTACATCAAGATATCGGTCTC GGACGATGGCGAAGGGATGGACGAGGCGACGGTCCTGCGTGCCGCCGAGCCATTTTTCACCACCAAGGGGATCGGCAAGG GCACCGGCCTCGGCCTGTCGATGGTGCACGGCCTGGCAGCGCAATCGGGCGGCTCGATCCAGATTTCGAGCACGAGAGGC AAGGGCACCACCGTCTCACTCTGGCTGCCCGTCGCCGAGAGCTTCACCAGGGCGCAGGCGGCGGACGTGCCGACAGCGGC GGAACCGGTGAAGCCGGTGTCGCGATCGCTCGCCATTCTTGTCGTCGACGACGATGCGCTCGTCAGGACTGGAACTGTGG CGATGCTGGAGGATCTCGGACATTTGCCGCGGGAGGCGTCTTCCGCCTCCCAGGCTCTGGAATTCTTCGCCGGCGGGCAG GAGTGCGATCTGGTTATCACCGATCACGCCATGCCGGGCATGACCGGCGCCGAGCTTGCGCGCCACCTTCGTGCAGCCTT TCCCAACCTGCCCGTGATCCTCGCTTCCGGCTATGTCGAGCTTGCCGAGGACCAGGGGCTCGGCCGGTTGCTCAGAATGA CGAAGCCGTTCACCCAAGAGCAGCTTCAGGCCGCCATGGACGAAGCGCTCCGGGACAAGGTCGCTGCGGCGTGA
Upstream 100 bases:
>100_bases TGCCTCGAGGCGGGTGCGTCGGATTACCTGGCGAAGCCCGTCAACACCGAGCAGCTGCTGTCAGCGCTGCGCATGTGGCT GCACCGTTGAGGATCCGGCC
Downstream 100 bases:
>100_bases TCGACGAAGCGAGCGGCTGGCCCTTCACTTTGATAGGCAGGCAGCTTGCGATTGTGATGAGTTTAGGAAATCCCACTCCC TCTCGGCCTGCACGCTGCTG
Product: putative two-component sensor histidine kinase/response regulator hybrid protein
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MNPVNILLVDDQPAKLLSYEVILEELEENLIKAQSAREAFEHLLRTEIAVILVDVCMPEQDGFELVSMIRQHPRYQNTPI IFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRVFADLYRKTRELERLNADLEARVHQRTAELEASAIQLRQLN EELEQRIDQRTREREEALAQLFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLSLLKKRLPADERSERLVTNAIQAAERGT ALTQRLLAFARRQELKPQAVDFLRLFENIEDLLAKAVGPRVEIRKCIPADLPPLLVDSNQLELALLNLFVNARDALESGG AVTVAAAAEEARPTGLAGGNYIKISVSDDGEGMDEATVLRAAEPFFTTKGIGKGTGLGLSMVHGLAAQSGGSIQISSTRG KGTTVSLWLPVAESFTRAQAADVPTAAEPVKPVSRSLAILVVDDDALVRTGTVAMLEDLGHLPREASSASQALEFFAGGQ ECDLVITDHAMPGMTGAELARHLRAAFPNLPVILASGYVELAEDQGLGRLLRMTKPFTQEQLQAAMDEALRDKVAAA
Sequences:
>Translated_557_residues MNPVNILLVDDQPAKLLSYEVILEELEENLIKAQSAREAFEHLLRTEIAVILVDVCMPEQDGFELVSMIRQHPRYQNTPI IFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRVFADLYRKTRELERLNADLEARVHQRTAELEASAIQLRQLN EELEQRIDQRTREREEALAQLFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLSLLKKRLPADERSERLVTNAIQAAERGT ALTQRLLAFARRQELKPQAVDFLRLFENIEDLLAKAVGPRVEIRKCIPADLPPLLVDSNQLELALLNLFVNARDALESGG AVTVAAAAEEARPTGLAGGNYIKISVSDDGEGMDEATVLRAAEPFFTTKGIGKGTGLGLSMVHGLAAQSGGSIQISSTRG KGTTVSLWLPVAESFTRAQAADVPTAAEPVKPVSRSLAILVVDDDALVRTGTVAMLEDLGHLPREASSASQALEFFAGGQ ECDLVITDHAMPGMTGAELARHLRAAFPNLPVILASGYVELAEDQGLGRLLRMTKPFTQEQLQAAMDEALRDKVAAA >Mature_557_residues MNPVNILLVDDQPAKLLSYEVILEELEENLIKAQSAREAFEHLLRTEIAVILVDVCMPEQDGFELVSMIRQHPRYQNTPI IFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRVFADLYRKTRELERLNADLEARVHQRTAELEASAIQLRQLN EELEQRIDQRTREREEALAQLFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLSLLKKRLPADERSERLVTNAIQAAERGT ALTQRLLAFARRQELKPQAVDFLRLFENIEDLLAKAVGPRVEIRKCIPADLPPLLVDSNQLELALLNLFVNARDALESGG AVTVAAAAEEARPTGLAGGNYIKISVSDDGEGMDEATVLRAAEPFFTTKGIGKGTGLGLSMVHGLAAQSGGSIQISSTRG KGTTVSLWLPVAESFTRAQAADVPTAAEPVKPVSRSLAILVVDDDALVRTGTVAMLEDLGHLPREASSASQALEFFAGGQ ECDLVITDHAMPGMTGAELARHLRAAFPNLPVILASGYVELAEDQGLGRLLRMTKPFTQEQLQAAMDEALRDKVAAA
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=33.6099585062241, Blast_Score=128, Evalue=8e-31, Organism=Escherichia coli, GI1788549, Length=239, Percent_Identity=29.2887029288703, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI48994928, Length=373, Percent_Identity=29.4906166219839, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788713, Length=367, Percent_Identity=26.4305177111717, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI87081816, Length=408, Percent_Identity=24.2647058823529, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 60657; Mature: 60657
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVNILLVDDQPAKLLSYEVILEELEENLIKAQSAREAFEHLLRTEIAVILVDVCMPEQ CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGFELVSMIRQHPRYQNTPIIFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRV CCHHHHHHHHHCCCCCCCCEEEEEHHHHCCCHHHCCEEECCHHHEECCCHHHHHHHHHHH FADLYRKTRELERLNADLEARVHQRTAELEASAIQLRQLNEELEQRIDQRTREREEALAQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLSLLKKRLPADERSERLVTNAIQAAERGT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ALTQRLLAFARRQELKPQAVDFLRLFENIEDLLAKAVGPRVEIRKCIPADLPPLLVDSNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEECCCC LELALLNLFVNARDALESGGAVTVAAAAEEARPTGLAGGNYIKISVSDDGEGMDEATVLR HHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHH AAEPFFTTKGIGKGTGLGLSMVHGLAAQSGGSIQISSTRGKGTTVSLWLPVAESFTRAQA HCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHH ADVPTAAEPVKPVSRSLAILVVDDDALVRTGTVAMLEDLGHLPREASSASQALEFFAGGQ CCCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC ECDLVITDHAMPGMTGAELARHLRAAFPNLPVILASGYVELAEDQGLGRLLRMTKPFTQE CEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCHHHHHHHCCCCCHH QLQAAMDEALRDKVAAA HHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPVNILLVDDQPAKLLSYEVILEELEENLIKAQSAREAFEHLLRTEIAVILVDVCMPEQ CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGFELVSMIRQHPRYQNTPIIFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRV CCHHHHHHHHHCCCCCCCCEEEEEHHHHCCCHHHCCEEECCHHHEECCCHHHHHHHHHHH FADLYRKTRELERLNADLEARVHQRTAELEASAIQLRQLNEELEQRIDQRTREREEALAQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLSLLKKRLPADERSERLVTNAIQAAERGT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ALTQRLLAFARRQELKPQAVDFLRLFENIEDLLAKAVGPRVEIRKCIPADLPPLLVDSNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEECCCC LELALLNLFVNARDALESGGAVTVAAAAEEARPTGLAGGNYIKISVSDDGEGMDEATVLR HHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHH AAEPFFTTKGIGKGTGLGLSMVHGLAAQSGGSIQISSTRGKGTTVSLWLPVAESFTRAQA HCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHH ADVPTAAEPVKPVSRSLAILVVDDDALVRTGTVAMLEDLGHLPREASSASQALEFFAGGQ CCCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC ECDLVITDHAMPGMTGAELARHLRAAFPNLPVILASGYVELAEDQGLGRLLRMTKPFTQE CEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCHHHHHHHCCCCCHH QLQAAMDEALRDKVAAA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA